RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 VCX2Q9H322 139 aa9.03□□□□□ -0.96
TOM1-214ENST00000487670 G0S2P27469 103 aa9.02□□□□□ -0.97
TOM1-214ENST00000487670 IGLV5-37A0A075B6J1 123 aa9.01□□□□□ -0.97
TOM1-214ENST00000487670 FAM19A1Q7Z5A9 133 aa9.01□□□□□ -0.97
TOM1-214ENST00000487670 C2orf88Q9BSF0 95 aa9.01□□□□□ -0.97
TOM1-214ENST00000487670 F8VRH5 84 aa9□□□□□ -0.97
TOM1-214ENST00000487670 LINC00310P59036 64 aa9□□□□□ -0.97
TOM1-214ENST00000487670 PDZD11Q5EBL8 140 aa9□□□□□ -0.97
TOM1-214ENST00000487670 XP32Q5T750 250 aa9□□□□□ -0.97
TOM1-214ENST00000487670 HBDP02042 147 aa8.99□□□□□ -0.97
TOM1-214ENST00000487670 SPAG11AQ6PDA7 123 aa8.99□□□□□ -0.97
TOM1-214ENST00000487670 FAM19A3Q7Z5A8 133 aa8.99□□□□□ -0.97
TOM1-214ENST00000487670 Q8NBF4 154 aa8.99□□□□□ -0.97
TOM1-214ENST00000487670 USH2AO75445 5202 aa8.99□□□□□ -0.97
TOM1-214ENST00000487670 RAB5BP61020 215 aa8.98□□□□□ -0.97
TOM1-214ENST00000487670 PAPPA-AS1Q5QFB9 102 aa8.98□□□□□ -0.97
TOM1-214ENST00000487670 CST9LQ9H4G1 147 aa8.98□□□□□ -0.97
TOM1-214ENST00000487670 CDKN2A-AS1Q9UH64 79 aa8.98□□□□□ -0.97
TOM1-214ENST00000487670 LINC01549A6NIU2 74 aa8.97□□□□□ -0.97
TOM1-214ENST00000487670 NKAPP1Q8N9T2 125 aa8.97□□□□□ -0.97
TOM1-214ENST00000487670 CHCHD1Q96BP2 118 aaKnown RBP8.97□□□□□ -0.97
TOM1-214ENST00000487670 TMEM126AQ9H061 195 aa8.97□□□□□ -0.97
TOM1-214ENST00000487670 M0R378 163 aa8.96□□□□□ -0.98
TOM1-214ENST00000487670 ATP6V1G1O75348 118 aa8.96□□□□□ -0.98
TOM1-214ENST00000487670 BAGE3Q86Y29 109 aa8.96□□□□□ -0.98
TOM1-214ENST00000487670 SERF1AO75920 110 aa8.95□□□□□ -0.98
TOM1-214ENST00000487670 PMVKQ15126 192 aa8.95□□□□□ -0.98
TOM1-214ENST00000487670 FAM19A2Q8N3H0 131 aa8.95□□□□□ -0.98
TOM1-214ENST00000487670 Q8NDZ9 215 aa8.95□□□□□ -0.98
TOM1-214ENST00000487670 SPRR4Q96PI1 79 aa8.95□□□□□ -0.98
TOM1-214ENST00000487670 HIGD2AQ9BW72 106 aa8.94□□□□□ -0.98
TOM1-214ENST00000487670 IGLV5-45A0A087WSX0 123 aa8.93□□□□□ -0.98
TOM1-214ENST00000487670 TINCRA0A1B0GVN0 87 aa8.93□□□□□ -0.98
TOM1-214ENST00000487670 HERVK_113P63121 156 aa8.93□□□□□ -0.98
TOM1-214ENST00000487670 GEMIN7Q9H840 131 aaKnown RBP8.93□□□□□ -0.98
TOM1-214ENST00000487670 HSBP1O75506 76 aa8.92□□□□□ -0.98
TOM1-214ENST00000487670 ATP5LO75964 103 aa8.92□□□□□ -0.98
TOM1-214ENST00000487670 NDUFA6P56556 154 aa8.92□□□□□ -0.98
TOM1-214ENST00000487670 PCOTHQ58A44 107 aa8.92□□□□□ -0.98
TOM1-214ENST00000487670 C4orf48Q5BLP8 95 aa8.92□□□□□ -0.98
TOM1-214ENST00000487670 SMIM1B2RUZ4 78 aa8.91□□□□□ -0.98
TOM1-214ENST00000487670 HIST1H2BKO60814 126 aa8.91□□□□□ -0.98
TOM1-214ENST00000487670 HIST1H2BJP06899 126 aa8.91□□□□□ -0.98
TOM1-214ENST00000487670 HIST1H2BOP23527 126 aa8.91□□□□□ -0.98
TOM1-214ENST00000487670 HIST1H2BBP33778 126 aa8.91□□□□□ -0.98
TOM1-214ENST00000487670 HIST1H2BDP58876 126 aa8.91□□□□□ -0.98
TOM1-214ENST00000487670 HIST1H2BCP62807 126 aa8.91□□□□□ -0.98
TOM1-214ENST00000487670 SEC11AP67812 179 aa8.91□□□□□ -0.98
TOM1-214ENST00000487670 HIST2H2BEQ16778 126 aa8.91□□□□□ -0.98
TOM1-214ENST00000487670 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.91□□□□□ -0.98
TOM1-214ENST00000487670 Q8N377 158 aa8.91□□□□□ -0.98
TOM1-214ENST00000487670 HIST1H2BHQ93079 126 aa8.91□□□□□ -0.98
TOM1-214ENST00000487670 HIST1H2BNQ99877 126 aa8.91□□□□□ -0.98
TOM1-214ENST00000487670 HIST1H2BMQ99879 126 aa8.91□□□□□ -0.98
TOM1-214ENST00000487670 IGLC3P0DOY3 106 aa8.9□□□□□ -0.98
TOM1-214ENST00000487670 VPREB1P12018 145 aa8.9□□□□□ -0.98
TOM1-214ENST00000487670 IGLV8-61A0A075B6I0 122 aa8.89□□□□□ -0.99
TOM1-214ENST00000487670 SPINK8P0C7L1 97 aa8.89□□□□□ -0.99
TOM1-214ENST00000487670 S100A1P23297 94 aa8.89□□□□□ -0.99
TOM1-214ENST00000487670 IFI27L1Q96BM0 104 aa8.89□□□□□ -0.99
TOM1-214ENST00000487670 C11orf86A6NJI1 115 aa8.88□□□□□ -0.99
TOM1-214ENST00000487670 M0R2T5 61 aa8.88□□□□□ -0.99
TOM1-214ENST00000487670 ZNF22P17026 224 aaPredicted RBP8.88□□□□□ -0.99
TOM1-214ENST00000487670 CXCL5P42830 114 aa8.88□□□□□ -0.99
TOM1-214ENST00000487670 FCGBPQ9Y6R7 5405 aaPredicted RBP8.88□□□□□ -0.99
TOM1-214ENST00000487670 COX7B2Q8TF08 81 aa8.87□□□□□ -0.99
TOM1-214ENST00000487670 SPINK1P00995 79 aa8.86□□□□□ -0.99
TOM1-214ENST00000487670 CHTOPQ9Y3Y2 248 aaKnown RBP8.86□□□□□ -0.99
TOM1-214ENST00000487670 TRAV12-1A0A0B4J245 112 aa8.85□□□□□ -0.99
TOM1-214ENST00000487670 IGLV5-39A0A0G2JS06 123 aa8.84□□□□□ -0.99
TOM1-214ENST00000487670 LEPROTL1O95214 131 aa8.84□□□□□ -0.99
TOM1-214ENST00000487670 FABP4P15090 132 aa8.84□□□□□ -0.99
TOM1-214ENST00000487670 H0Y8G0 127 aa8.83□□□□□ -1
TOM1-214ENST00000487670 PFN2P35080 140 aa8.83□□□□□ -1
TOM1-214ENST00000487670 H3BRM9 83 aa8.82□□□□□ -1
TOM1-214ENST00000487670 TMEM170BQ5T4T1 132 aa8.82□□□□□ -1
TOM1-214ENST00000487670 SND1-IT1Q9HBX3 110 aa8.81□□□□□ -1
TOM1-214ENST00000487670 NDUFA12Q9UI09 145 aa8.81□□□□□ -1
TOM1-214ENST00000487670 HSPB8Q9UJY1 196 aa8.81□□□□□ -1
TOM1-214ENST00000487670 MOBPQ13875 183 aa8.8□□□□□ -1
TOM1-214ENST00000487670 COA6Q5JTJ3 125 aaKnown RBP8.8□□□□□ -1
TOM1-214ENST00000487670 PMCHL2Q9BQD1 86 aa8.8□□□□□ -1
TOM1-214ENST00000487670 IGLV9-49A0A0B4J1Y8 123 aa8.78□□□□□ -1
TOM1-214ENST00000487670 TMEM223A0PJW6 202 aa8.78□□□□□ -1
TOM1-214ENST00000487670 KRTAP4-16G5E9R7 235 aaPredicted RBP8.78□□□□□ -1
TOM1-214ENST00000487670 C9orf92A6NGG3 77 aa8.77□□□□□ -1.01
TOM1-214ENST00000487670 SMCR5Q8TEV8 140 aa8.76□□□□□ -1.01
TOM1-214ENST00000487670 SLC25A20O43772 301 aa8.75□□□□□ -1.01
TOM1-214ENST00000487670 LINC00483Q53H64 154 aa8.75□□□□□ -1.01
TOM1-214ENST00000487670 MAP1LC3CQ9BXW4 147 aa8.75□□□□□ -1.01
TOM1-214ENST00000487670 ZNF706Q9Y5V0 76 aaPredicted RBP8.75□□□□□ -1.01
TOM1-214ENST00000487670 RPS29P62273 56 aaKnown RBP8.74□□□□□ -1.01
TOM1-214ENST00000487670 ZNF625Q96I27 306 aaPredicted RBP8.74□□□□□ -1.01
TOM1-214ENST00000487670 SYS1-DBNDD2H3BUS1 97 aa8.73□□□□□ -1.01
TOM1-214ENST00000487670 DPM2O94777 84 aa8.73□□□□□ -1.01
TOM1-214ENST00000487670 PLNP26678 52 aa8.73□□□□□ -1.01
TOM1-214ENST00000487670 TSPEAR-AS2P59090 65 aa8.73□□□□□ -1.01
TOM1-214ENST00000487670 GAGE2AQ6NT46 116 aa8.73□□□□□ -1.01
TOM1-214ENST00000487670 ERG28Q9UKR5 140 aa8.72□□□□□ -1.01
TOM1-214ENST00000487670 ERC2-IT1O76042 136 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms