RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 LINC00474Q9P2X8 69 aa3.66□□□□□ -1.82
SF1-217ENST00000486960 LRP1Q07954 4544 aaKnown RBP3.66□□□□□ -1.82
SF1-217ENST00000486960 TRAV13-2A0A0B4J235 113 aa3.65□□□□□ -1.83
SF1-217ENST00000486960 B4DSR2 109 aa3.65□□□□□ -1.83
SF1-217ENST00000486960 ROMO1P60602 79 aa3.65□□□□□ -1.83
SF1-217ENST00000486960 Q1RN00 199 aa3.65□□□□□ -1.83
SF1-217ENST00000486960 PSMG4Q5JS54 123 aa3.65□□□□□ -1.83
SF1-217ENST00000486960 CASC2Q6XLA1 102 aa3.65□□□□□ -1.83
SF1-217ENST00000486960 FAM19A2Q8N3H0 131 aa3.65□□□□□ -1.83
SF1-217ENST00000486960 LEAP2Q969E1 77 aa3.65□□□□□ -1.83
SF1-217ENST00000486960 CYP4F30PQ9H0H9 118 aa3.65□□□□□ -1.83
SF1-217ENST00000486960 C14orf132Q9NPU4 83 aa3.65□□□□□ -1.83
SF1-217ENST00000486960 CRCT1Q9UGL9 99 aa3.65□□□□□ -1.83
SF1-217ENST00000486960 SMAD5-AS1Q9Y6J3 95 aa3.65□□□□□ -1.83
SF1-217ENST00000486960 C11orf94C9JXX5 98 aa3.64□□□□□ -1.83
SF1-217ENST00000486960 H3BPC8 53 aa3.64□□□□□ -1.83
SF1-217ENST00000486960 HCP5Q6MZN7 132 aa3.64□□□□□ -1.83
SF1-217ENST00000486960 LYZL1Q6UWQ5 148 aa3.64□□□□□ -1.83
SF1-217ENST00000486960 C1orf64Q8NEQ6 169 aa3.64□□□□□ -1.83
SF1-217ENST00000486960 TIMM21Q9BVV7 248 aa3.64□□□□□ -1.83
SF1-217ENST00000486960 LINC00574Q9H8X3 128 aa3.64□□□□□ -1.83
SF1-217ENST00000486960 TRBV10-3A0A0K0K1G6 114 aa3.63□□□□□ -1.83
SF1-217ENST00000486960 C17orf98A8MV24 154 aa3.63□□□□□ -1.83
SF1-217ENST00000486960 H7C2G1 150 aa3.63□□□□□ -1.83
SF1-217ENST00000486960 PPYP01298 95 aa3.63□□□□□ -1.83
SF1-217ENST00000486960 FXYD4P59646 89 aa3.63□□□□□ -1.83
SF1-217ENST00000486960 EIF4EBP1Q13541 118 aaPredicted RBP3.63□□□□□ -1.83
SF1-217ENST00000486960 C1orf134Q5TEV5 83 aa3.63□□□□□ -1.83
SF1-217ENST00000486960 IGFL4Q6B9Z1 124 aa3.63□□□□□ -1.83
SF1-217ENST00000486960 TVP23CQ96ET8 276 aa3.63□□□□□ -1.83
SF1-217ENST00000486960 ZNF355PQ9NSJ1 428 aa3.63□□□□□ -1.83
SF1-217ENST00000486960 FAT3Q8TDW7 4589 aa3.63□□□□□ -1.83
SF1-217ENST00000486960 KRTAP9-7A8MTY7 169 aa3.62□□□□□ -1.83
SF1-217ENST00000486960 H7BZZ5 65 aa3.62□□□□□ -1.83
SF1-217ENST00000486960 LY6G6CO95867 125 aa3.62□□□□□ -1.83
SF1-217ENST00000486960 FAM229BQ4G0N7 80 aa3.62□□□□□ -1.83
SF1-217ENST00000486960 RPL39P5Q59GN2 51 aa3.62□□□□□ -1.83
SF1-217ENST00000486960 C9orf116Q5BN46 136 aaPredicted RBP3.62□□□□□ -1.83
SF1-217ENST00000486960 ZNF818PQ6ZRF7 136 aa3.62□□□□□ -1.83
SF1-217ENST00000486960 SPTSSBQ8NFR3 76 aa3.62□□□□□ -1.83
SF1-217ENST00000486960 CYSTM1Q9H1C7 97 aa3.62□□□□□ -1.83
SF1-217ENST00000486960 MANBALQ9NQG1 85 aa3.62□□□□□ -1.83
SF1-217ENST00000486960 IGKV1D-37A0A075B6S9 117 aa3.61□□□□□ -1.83
SF1-217ENST00000486960 IGKV1OR2-108A0A075B7D4 117 aa3.61□□□□□ -1.83
SF1-217ENST00000486960 TRBV7-1A0A0A6YYK4 115 aa3.61□□□□□ -1.83
SF1-217ENST00000486960 DNAH10OSP0CZ25 163 aa3.61□□□□□ -1.83
SF1-217ENST00000486960 COX8AP10176 69 aa3.61□□□□□ -1.83
SF1-217ENST00000486960 MGST1P10620 155 aaKnown RBP3.61□□□□□ -1.83
SF1-217ENST00000486960 KLKP1Q107X0 134 aa3.61□□□□□ -1.83
SF1-217ENST00000486960 ZNF56Q15929 161 aa3.61□□□□□ -1.83
SF1-217ENST00000486960 Q6ZQT0 140 aa3.61□□□□□ -1.83
SF1-217ENST00000486960 C9orf47Q6ZRZ4 202 aa3.61□□□□□ -1.83
SF1-217ENST00000486960 KRTAP4-7Q9BYR0 210 aa3.61□□□□□ -1.83
SF1-217ENST00000486960 A0A1B0GUV1 79 aa3.6□□□□□ -1.83
SF1-217ENST00000486960 A8MUU9 505 aa3.6□□□□□ -1.83
SF1-217ENST00000486960 ODF3BA8MYP8 253 aa3.6□□□□□ -1.83
SF1-217ENST00000486960 C16orf90A8MZG2 172 aa3.6□□□□□ -1.83
SF1-217ENST00000486960 M0R1W7 72 aa3.6□□□□□ -1.83
SF1-217ENST00000486960 IGLV1-47P01700 117 aa3.6□□□□□ -1.83
SF1-217ENST00000486960 DEFA4P12838 97 aa3.6□□□□□ -1.83
SF1-217ENST00000486960 SPANXN5Q5MJ07 72 aa3.6□□□□□ -1.83
SF1-217ENST00000486960 LYPD5Q6UWN5 251 aa3.6□□□□□ -1.83
SF1-217ENST00000486960 VMO1Q7Z5L0 202 aa3.6□□□□□ -1.83
SF1-217ENST00000486960 HCG22E2RYF7 251 aa3.59□□□□□ -1.83
SF1-217ENST00000486960 SAA2P0DJI9 122 aaPredicted RBP3.59□□□□□ -1.83
SF1-217ENST00000486960 ZNF22P17026 224 aaPredicted RBP3.59□□□□□ -1.83
SF1-217ENST00000486960 ZNF833PQ6ZTB9 187 aa3.59□□□□□ -1.83
SF1-217ENST00000486960 LITAFQ99732 161 aa3.59□□□□□ -1.83
SF1-217ENST00000486960 CDC42SE1Q9NRR8 79 aa3.59□□□□□ -1.83
SF1-217ENST00000486960 PRO1854Q9UHT4 67 aa3.59□□□□□ -1.83
SF1-217ENST00000486960 H3BQ85 93 aa3.58□□□□□ -1.84
SF1-217ENST00000486960 IL4P05112 153 aa3.58□□□□□ -1.84
SF1-217ENST00000486960 ZNF137PP52743 207 aa3.58□□□□□ -1.84
SF1-217ENST00000486960 MRGPRG-AS1Q2M3A8 158 aa3.58□□□□□ -1.84
SF1-217ENST00000486960 CYB561D1Q8N8Q1 229 aa3.58□□□□□ -1.84
SF1-217ENST00000486960 FAM167A-AS1Q96KT0 104 aa3.58□□□□□ -1.84
SF1-217ENST00000486960 KRTAP3-1Q9BYR8 98 aa3.58□□□□□ -1.84
SF1-217ENST00000486960 HILPDAQ9Y5L2 63 aa3.58□□□□□ -1.84
SF1-217ENST00000486960 TNXBP22105 4242 aa3.57□□□□□ -1.84
SF1-217ENST00000486960 TRAV40A0A0B4J280 105 aa3.57□□□□□ -1.84
SF1-217ENST00000486960 C11orf86A6NJI1 115 aa3.57□□□□□ -1.84
SF1-217ENST00000486960 E7EUB6 86 aa3.57□□□□□ -1.84
SF1-217ENST00000486960 C3orf79P0CE67 100 aa3.57□□□□□ -1.84
SF1-217ENST00000486960 UBE2D3P61077 147 aa3.57□□□□□ -1.84
SF1-217ENST00000486960 UBE2D2P62837 147 aa3.57□□□□□ -1.84
SF1-217ENST00000486960 C15orf32Q32M92 178 aa3.57□□□□□ -1.84
SF1-217ENST00000486960 BRD3OSQ6XYD6 125 aa3.57□□□□□ -1.84
SF1-217ENST00000486960 SPANXA2-OT1Q8N9U9 137 aa3.57□□□□□ -1.84
SF1-217ENST00000486960 WFDC9Q8NEX5 89 aa3.57□□□□□ -1.84
SF1-217ENST00000486960 TMEM254Q8TBM7 123 aa3.57□□□□□ -1.84
SF1-217ENST00000486960 A0A087WSZ3 146 aa3.56□□□□□ -1.84
SF1-217ENST00000486960 IGHV3-53P01767 116 aa3.56□□□□□ -1.84
SF1-217ENST00000486960 IGLV7-43P04211 117 aa3.56□□□□□ -1.84
SF1-217ENST00000486960 COX6CP09669 75 aa3.56□□□□□ -1.84
SF1-217ENST00000486960 BAALC-AS2P0C853 105 aa3.56□□□□□ -1.84
SF1-217ENST00000486960 RPL36AP83881 106 aaKnown RBP3.56□□□□□ -1.84
SF1-217ENST00000486960 IGLV10-54A0A075B6I4 117 aa3.55□□□□□ -1.84
SF1-217ENST00000486960 IGLV2-11P01706 119 aa3.55□□□□□ -1.84
SF1-217ENST00000486960 GIG44P09565 113 aaPredicted RBP3.55□□□□□ -1.84
SF1-217ENST00000486960 DEFB112Q30KQ8 113 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms