RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 C9orf116Q5BN46 136 aaPredicted RBP9.64□□□□□ -0.87
POLR2J3-204ENST00000486319 LINC00336Q6ZUF6 198 aa9.64□□□□□ -0.87
POLR2J3-204ENST00000486319 DNAH10Q8IVF4 4471 aa9.63□□□□□ -0.87
POLR2J3-204ENST00000486319 TRBV20-1A0A075B6N2 111 aa9.63□□□□□ -0.87
POLR2J3-204ENST00000486319 C1orf134Q5TEV5 83 aa9.63□□□□□ -0.87
POLR2J3-204ENST00000486319 C6orf48Q9UBA6 75 aa9.63□□□□□ -0.87
POLR2J3-204ENST00000486319 RTL8CO15255 209 aa9.62□□□□□ -0.87
POLR2J3-204ENST00000486319 NDUFC2O95298 119 aa9.62□□□□□ -0.87
POLR2J3-204ENST00000486319 COX6CP09669 75 aa9.62□□□□□ -0.87
POLR2J3-204ENST00000486319 DNAH2Q9P225 4427 aa9.61□□□□□ -0.87
POLR2J3-204ENST00000486319 IGKV2-28A0A075B6P5 120 aa9.61□□□□□ -0.87
POLR2J3-204ENST00000486319 IGKV2D-28P01615 120 aa9.61□□□□□ -0.87
POLR2J3-204ENST00000486319 TRIAP1O43715 76 aa9.6□□□□□ -0.87
POLR2J3-204ENST00000486319 TTC32Q5I0X7 151 aa9.6□□□□□ -0.87
POLR2J3-204ENST00000486319 Q6ZRU5 148 aa9.6□□□□□ -0.87
POLR2J3-204ENST00000486319 BIRC6Q9NR09 4857 aa9.59□□□□□ -0.87
POLR2J3-204ENST00000486319 USP17L23D6RBM5 183 aa9.59□□□□□ -0.87
POLR2J3-204ENST00000486319 H3BMG7 143 aa9.59□□□□□ -0.87
POLR2J3-204ENST00000486319 SYCNQ0VAF6 134 aa9.59□□□□□ -0.87
POLR2J3-204ENST00000486319 LINC00337Q8N6G1 96 aa9.59□□□□□ -0.87
POLR2J3-204ENST00000486319 TCL1BO95988 128 aa9.58□□□□□ -0.88
POLR2J3-204ENST00000486319 F8W1H4 67 aa9.57□□□□□ -0.88
POLR2J3-204ENST00000486319 KRTAP1-5Q9BYS1 174 aa9.57□□□□□ -0.88
POLR2J3-204ENST00000486319 RNF151Q2KHN1 245 aa9.56□□□□□ -0.88
POLR2J3-204ENST00000486319 NDUFC2-KCTD14E9PQ53 114 aa9.56□□□□□ -0.88
POLR2J3-204ENST00000486319 RPL28P46779 137 aaKnown RBP9.56□□□□□ -0.88
POLR2J3-204ENST00000486319 ATXN8Q156A1 80 aa9.56□□□□□ -0.88
POLR2J3-204ENST00000486319 FAT2Q9NYQ8 4349 aa9.55□□□□□ -0.88
POLR2J3-204ENST00000486319 OR13C6PQ8NH95 151 aa9.55□□□□□ -0.88
POLR2J3-204ENST00000486319 CARD19Q96LW7 228 aa9.55□□□□□ -0.88
POLR2J3-204ENST00000486319 PSCAO43653 123 aa9.54□□□□□ -0.88
POLR2J3-204ENST00000486319 A0A1B0GVY2 172 aa9.53□□□□□ -0.88
POLR2J3-204ENST00000486319 HECTD4Q9Y4D8 3996 aa9.53□□□□□ -0.88
POLR2J3-204ENST00000486319 TMEM126AQ9H061 195 aa9.52□□□□□ -0.88
POLR2J3-204ENST00000486319 TRBV10-2A0A0K0K1G8 114 aa9.51□□□□□ -0.89
POLR2J3-204ENST00000486319 TLX1NBP0CAT3 122 aa9.51□□□□□ -0.89
POLR2J3-204ENST00000486319 TNP2Q05952 138 aa9.51□□□□□ -0.89
POLR2J3-204ENST00000486319 SMIM11BQ8TCY0 68 aa9.51□□□□□ -0.89
POLR2J3-204ENST00000486319 PRO0461Q9UI25 63 aa9.51□□□□□ -0.89
POLR2J3-204ENST00000486319 DNAH17Q9UFH2 4485 aa9.51□□□□□ -0.89
POLR2J3-204ENST00000486319 PRR3P79522 188 aaKnown RBP9.51□□□□□ -0.89
POLR2J3-204ENST00000486319 XAGE1AQ9HD64 81 aa9.51□□□□□ -0.89
POLR2J3-204ENST00000486319 LST1O00453 97 aa9.5□□□□□ -0.89
POLR2J3-204ENST00000486319 NCR3O14931 201 aa9.5□□□□□ -0.89
POLR2J3-204ENST00000486319 LECT2O14960 151 aa9.5□□□□□ -0.89
POLR2J3-204ENST00000486319 C14orf177Q52M58 125 aa9.5□□□□□ -0.89
POLR2J3-204ENST00000486319 S100A7L2Q5SY68 101 aa9.5□□□□□ -0.89
POLR2J3-204ENST00000486319 SLPIP03973 132 aa9.49□□□□□ -0.89
POLR2J3-204ENST00000486319 LINC01620Q4KN68 170 aa9.49□□□□□ -0.89
POLR2J3-204ENST00000486319 Q6ZRP5 223 aa9.49□□□□□ -0.89
POLR2J3-204ENST00000486319 Q8NDZ9 215 aa9.49□□□□□ -0.89
POLR2J3-204ENST00000486319 CLEC2BQ92478 149 aa9.49□□□□□ -0.89
POLR2J3-204ENST00000486319 H0YGX0 51 aa9.48□□□□□ -0.89
POLR2J3-204ENST00000486319 WFDC2Q14508 124 aa9.48□□□□□ -0.89
POLR2J3-204ENST00000486319 GAGE2EQ4V326 116 aa9.48□□□□□ -0.89
POLR2J3-204ENST00000486319 GAGE2DQ9UEU5 116 aa9.48□□□□□ -0.89
POLR2J3-204ENST00000486319 MTURNQ8N3F0 131 aa9.47□□□□□ -0.89
POLR2J3-204ENST00000486319 C9JAW5 83 aa9.46□□□□□ -0.89
POLR2J3-204ENST00000486319 RPL18AQ02543 176 aaKnown RBP9.46□□□□□ -0.89
POLR2J3-204ENST00000486319 M0QXV9 152 aa9.46□□□□□ -0.9
POLR2J3-204ENST00000486319 SLC25A20O43772 301 aa9.46□□□□□ -0.9
POLR2J3-204ENST00000486319 VPREB1P12018 145 aa9.46□□□□□ -0.9
POLR2J3-204ENST00000486319 PKHD1P08F94 4074 aa9.45□□□□□ -0.9
POLR2J3-204ENST00000486319 IGLV6-57P01721 117 aa9.45□□□□□ -0.9
POLR2J3-204ENST00000486319 SMCPP49901 116 aaPredicted RBP9.45□□□□□ -0.9
POLR2J3-204ENST00000486319 CNBPP62633 177 aaKnown RBP9.45□□□□□ -0.9
POLR2J3-204ENST00000486319 PKD1P98161 4303 aa9.44□□□□□ -0.9
POLR2J3-204ENST00000486319 LOC107984640A0A0U1RRK4 108 aa9.44□□□□□ -0.9
POLR2J3-204ENST00000486319 TRACP01848 142 aa9.44□□□□□ -0.9
POLR2J3-204ENST00000486319 C9orf129Q5T035 196 aaKnown RBP9.44□□□□□ -0.9
POLR2J3-204ENST00000486319 Q6ZRN7 208 aaPredicted RBP9.44□□□□□ -0.9
POLR2J3-204ENST00000486319 M0R378 163 aa9.43□□□□□ -0.9
POLR2J3-204ENST00000486319 LINC01600Q96MT4 127 aa9.43□□□□□ -0.9
POLR2J3-204ENST00000486319 PLA2G2DQ9UNK4 145 aa9.43□□□□□ -0.9
POLR2J3-204ENST00000486319 H3BT86 120 aa9.42□□□□□ -0.9
POLR2J3-204ENST00000486319 ETDBQ3ZM63 59 aa9.42□□□□□ -0.9
POLR2J3-204ENST00000486319 CBY1Q9Y3M2 126 aa9.42□□□□□ -0.9
POLR2J3-204ENST00000486319 LRCOL1A6NCL2 159 aa9.41□□□□□ -0.9
POLR2J3-204ENST00000486319 OCIAD2Q56VL3 154 aa9.41□□□□□ -0.9
POLR2J3-204ENST00000486319 ANKRD29Q8N6D5 301 aa9.41□□□□□ -0.9
POLR2J3-204ENST00000486319 FAM218AQ96MZ4 157 aa9.41□□□□□ -0.9
POLR2J3-204ENST00000486319 TRBV10-3A0A0K0K1G6 114 aa9.4□□□□□ -0.91
POLR2J3-204ENST00000486319 C16orf90A8MZG2 172 aa9.4□□□□□ -0.91
POLR2J3-204ENST00000486319 K7ERU9 68 aa9.4□□□□□ -0.91
POLR2J3-204ENST00000486319 GAGE2BQ13066 116 aa9.4□□□□□ -0.91
POLR2J3-204ENST00000486319 C6orf99Q4VX62 202 aa9.4□□□□□ -0.91
POLR2J3-204ENST00000486319 NKAPP1Q8N9T2 125 aa9.4□□□□□ -0.91
POLR2J3-204ENST00000486319 TRAV23DV6A0A075B6W5 121 aa9.39□□□□□ -0.91
POLR2J3-204ENST00000486319 A0A1B0GX51 115 aa9.39□□□□□ -0.91
POLR2J3-204ENST00000486319 DNAL4O96015 105 aa9.39□□□□□ -0.91
POLR2J3-204ENST00000486319 TEN1Q86WV5 123 aa9.39□□□□□ -0.91
POLR2J3-204ENST00000486319 PKIGQ9Y2B9 76 aa9.39□□□□□ -0.91
POLR2J3-204ENST00000486319 IGLV5-37A0A075B6J1 123 aa9.37□□□□□ -0.91
POLR2J3-204ENST00000486319 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.37□□□□□ -0.91
POLR2J3-204ENST00000486319 A0A087WYN8 130 aa9.37□□□□□ -0.91
POLR2J3-204ENST00000486319 SNCGO76070 127 aa9.37□□□□□ -0.91
POLR2J3-204ENST00000486319 DNAH11Q96DT5 4516 aa9.37□□□□□ -0.91
POLR2J3-204ENST00000486319 KRTAP10-2P60368 255 aa9.36□□□□□ -0.91
POLR2J3-204ENST00000486319 SERTAD4-AS1Q5TG53 156 aa9.36□□□□□ -0.91
POLR2J3-204ENST00000486319 DIRC1Q969H9 104 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms