RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 H3BRM9 83 aa13.46□□□□□ -0.25
SREBF1-214ENST00000486311 C22orf24Q9Y442 160 aa13.46□□□□□ -0.25
SREBF1-214ENST00000486311 XAGE1AQ9HD64 81 aa13.45□□□□□ -0.26
SREBF1-214ENST00000486311 IGLV5-45A0A087WSX0 123 aa13.44□□□□□ -0.26
SREBF1-214ENST00000486311 C11orf86A6NJI1 115 aa13.44□□□□□ -0.26
SREBF1-214ENST00000486311 IGKCP01834 107 aa13.44□□□□□ -0.26
SREBF1-214ENST00000486311 ZNF861PO60384 105 aa13.43□□□□□ -0.26
SREBF1-214ENST00000486311 CXCL5P42830 114 aa13.43□□□□□ -0.26
SREBF1-214ENST00000486311 LBHQ53QV2 105 aaPredicted RBP13.43□□□□□ -0.26
SREBF1-214ENST00000486311 TMEM170BQ5T4T1 132 aa13.43□□□□□ -0.26
SREBF1-214ENST00000486311 RPL13AP40429 203 aaKnown RBP13.42□□□□□ -0.26
SREBF1-214ENST00000486311 PMCHL2Q9BQD1 86 aa13.42□□□□□ -0.26
SREBF1-214ENST00000486311 ZNF22P17026 224 aaPredicted RBP13.41□□□□□ -0.26
SREBF1-214ENST00000486311 SMIM1B2RUZ4 78 aa13.4□□□□□ -0.26
SREBF1-214ENST00000486311 SCGB1D1O95968 90 aa13.4□□□□□ -0.26
SREBF1-214ENST00000486311 TP73-AS1Q9UF72 201 aa13.4□□□□□ -0.26
SREBF1-214ENST00000486311 HERVK_113P61574 105 aa13.39□□□□□ -0.27
SREBF1-214ENST00000486311 MRPL55Q7Z7F7 128 aaKnown RBP13.38□□□□□ -0.27
SREBF1-214ENST00000486311 COX7B2Q8TF08 81 aa13.36□□□□□ -0.27
SREBF1-214ENST00000486311 JOSD1Q15040 202 aaPredicted RBP13.35□□□□□ -0.27
SREBF1-214ENST00000486311 TMEM223A0PJW6 202 aa13.34□□□□□ -0.27
SREBF1-214ENST00000486311 SPINK8P0C7L1 97 aa13.34□□□□□ -0.27
SREBF1-214ENST00000486311 HSBP1L1C9JCN9 74 aa13.33□□□□□ -0.28
SREBF1-214ENST00000486311 BCE1O60756 84 aa13.33□□□□□ -0.28
SREBF1-214ENST00000486311 RPL28P46779 137 aaKnown RBP13.31□□□□□ -0.28
SREBF1-214ENST00000486311 LINC00167Q96N53 147 aa13.31□□□□□ -0.28
SREBF1-214ENST00000486311 IGLV5-39A0A0G2JS06 123 aa13.3□□□□□ -0.28
SREBF1-214ENST00000486311 ATOH7Q8N100 152 aa13.3□□□□□ -0.28
SREBF1-214ENST00000486311 PLEKHB2Q96CS7 222 aa13.29□□□□□ -0.28
SREBF1-214ENST00000486311 IGLV5-37A0A075B6J1 123 aa13.28□□□□□ -0.28
SREBF1-214ENST00000486311 RPL37AP8A6NKH3 93 aa13.28□□□□□ -0.28
SREBF1-214ENST00000486311 PRR4Q16378 134 aa13.28□□□□□ -0.28
SREBF1-214ENST00000486311 E9PLD3 99 aa13.27□□□□□ -0.29
SREBF1-214ENST00000486311 SFTA2Q6UW10 78 aa13.27□□□□□ -0.29
SREBF1-214ENST00000486311 LOC105371267A0A1B0GV96 52 aa13.26□□□□□ -0.29
SREBF1-214ENST00000486311 LEPROTO15243 131 aa13.26□□□□□ -0.29
SREBF1-214ENST00000486311 PYY3Q5JQD4 70 aa13.26□□□□□ -0.29
SREBF1-214ENST00000486311 A0A087X002 238 aa13.25□□□□□ -0.29
SREBF1-214ENST00000486311 GAGE10A6NGK3 116 aa13.25□□□□□ -0.29
SREBF1-214ENST00000486311 LGALS3P17931 250 aaKnown RBP13.24□□□□□ -0.29
SREBF1-214ENST00000486311 NKAPP1Q8N9T2 125 aa13.23□□□□□ -0.29
SREBF1-214ENST00000486311 VAMP8Q9BV40 100 aa13.23□□□□□ -0.29
SREBF1-214ENST00000486311 J3QQQ9 107 aa13.22□□□□□ -0.29
SREBF1-214ENST00000486311 CRYGAP11844 174 aa13.22□□□□□ -0.29
SREBF1-214ENST00000486311 KRTAP13-1Q8IUC0 172 aa13.22□□□□□ -0.29
SREBF1-214ENST00000486311 MUC2Q02817 5179 aa13.21□□□□□ -0.29
SREBF1-214ENST00000486311 NMUP48645 174 aa13.21□□□□□ -0.29
SREBF1-214ENST00000486311 TSPAN13O95857 204 aa13.2□□□□□ -0.3
SREBF1-214ENST00000486311 SMIM6P0DI80 62 aa13.2□□□□□ -0.3
SREBF1-214ENST00000486311 S100A12P80511 92 aa13.2□□□□□ -0.3
SREBF1-214ENST00000486311 MYMXA0A1B0GTQ4 84 aa13.19□□□□□ -0.3
SREBF1-214ENST00000486311 ANKRD39Q53RE8 183 aa13.19□□□□□ -0.3
SREBF1-214ENST00000486311 TYMSOSQ8TAI1 123 aa13.19□□□□□ -0.3
SREBF1-214ENST00000486311 NDUFA12Q9UI09 145 aa13.19□□□□□ -0.3
SREBF1-214ENST00000486311 UBE2AP49459 152 aa13.18□□□□□ -0.3
SREBF1-214ENST00000486311 HERV-K104P63124 156 aa13.18□□□□□ -0.3
SREBF1-214ENST00000486311 PFN2P35080 140 aa13.17□□□□□ -0.3
SREBF1-214ENST00000486311 ANAPC11Q9NYG5 84 aa13.17□□□□□ -0.3
SREBF1-214ENST00000486311 PAM16Q9Y3D7 125 aa13.17□□□□□ -0.3
SREBF1-214ENST00000486311 IGKV2-28A0A075B6P5 120 aa13.15□□□□□ -0.3
SREBF1-214ENST00000486311 IGKV2D-26A0A0A0MRZ7 120 aa13.15□□□□□ -0.3
SREBF1-214ENST00000486311 LINC00587B1AMM8 73 aa13.15□□□□□ -0.3
SREBF1-214ENST00000486311 IGKV2D-28P01615 120 aa13.15□□□□□ -0.3
SREBF1-214ENST00000486311 TSPEAR-AS2P59090 65 aa13.15□□□□□ -0.3
SREBF1-214ENST00000486311 SPATA45Q537H7 98 aa13.15□□□□□ -0.3
SREBF1-214ENST00000486311 ERG28Q9UKR5 140 aa13.15□□□□□ -0.3
SREBF1-214ENST00000486311 VPREB1P12018 145 aa13.14□□□□□ -0.31
SREBF1-214ENST00000486311 ZNF625Q96I27 306 aaPredicted RBP13.14□□□□□ -0.31
SREBF1-214ENST00000486311 SND1-IT1Q9HBX3 110 aa13.14□□□□□ -0.31
SREBF1-214ENST00000486311 ZNF815PA8K554 130 aa13.13□□□□□ -0.31
SREBF1-214ENST00000486311 COX17Q14061 63 aa13.13□□□□□ -0.31
SREBF1-214ENST00000486311 FAM229BQ4G0N7 80 aa13.13□□□□□ -0.31
SREBF1-214ENST00000486311 KRTAP13-2Q52LG2 175 aa13.13□□□□□ -0.31
SREBF1-214ENST00000486311 RPL24P83731 157 aaKnown RBP13.1□□□□□ -0.31
SREBF1-214ENST00000486311 MEIG1Q5JSS6 88 aa13.1□□□□□ -0.31
SREBF1-214ENST00000486311 TMEM126AQ9H061 195 aa13.09□□□□□ -0.31
SREBF1-214ENST00000486311 TMEM238C9JI98 176 aa13.08□□□□□ -0.32
SREBF1-214ENST00000486311 COX8AP10176 69 aa13.08□□□□□ -0.32
SREBF1-214ENST00000486311 PRLHP81277 87 aa13.08□□□□□ -0.32
SREBF1-214ENST00000486311 PCP2Q8IVA1 136 aa13.08□□□□□ -0.32
SREBF1-214ENST00000486311 SCGB1D4Q6XE38 83 aa13.07□□□□□ -0.32
SREBF1-214ENST00000486311 FAM19A1Q7Z5A9 133 aa13.07□□□□□ -0.32
SREBF1-214ENST00000486311 Q8NDZ9 215 aa13.07□□□□□ -0.32
SREBF1-214ENST00000486311 DLEU1O43261 78 aa13.06□□□□□ -0.32
SREBF1-214ENST00000486311 TTTY13Q9BZ97 58 aa13.06□□□□□ -0.32
SREBF1-214ENST00000486311 A0A0J9YXY3 114 aa13.05□□□□□ -0.32
SREBF1-214ENST00000486311 M0R378 163 aa13.05□□□□□ -0.32
SREBF1-214ENST00000486311 LINC00158P58513 81 aa13.04□□□□□ -0.32
SREBF1-214ENST00000486311 SLC25A34Q6PIV7 304 aa13.04□□□□□ -0.32
SREBF1-214ENST00000486311 BOD1L2Q8IYS8 172 aa13.04□□□□□ -0.32
SREBF1-214ENST00000486311 LINC00304Q8N9R0 145 aa13.04□□□□□ -0.32
SREBF1-214ENST00000486311 C12orf57Q99622 126 aa13.04□□□□□ -0.32
SREBF1-214ENST00000486311 TIMM17BO60830 172 aa13.03□□□□□ -0.32
SREBF1-214ENST00000486311 C14orf144Q96I85 54 aa13.03□□□□□ -0.32
SREBF1-214ENST00000486311 SMIM13P0DJ93 91 aa13.01□□□□□ -0.33
SREBF1-214ENST00000486311 CTAG1AP78358 180 aa12.99□□□□□ -0.33
SREBF1-214ENST00000486311 RETNLBQ9BQ08 111 aa12.99□□□□□ -0.33
SREBF1-214ENST00000486311 UQCR10Q9UDW1 63 aa12.99□□□□□ -0.33
SREBF1-214ENST00000486311 A0A0U1RRA0 63 aa12.98□□□□□ -0.33
SREBF1-214ENST00000486311 LINC00518Q8N0U6 118 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms