RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 H3BRM9 83 aa1.44□□□□□ -2.18
VPS41-213ENST00000485955 SYS1-DBNDD2H3BUS1 97 aa1.44□□□□□ -2.18
VPS41-213ENST00000485955 NDUFC1O43677 76 aa1.44□□□□□ -2.18
VPS41-213ENST00000485955 ZNF791Q3KP31 576 aaPredicted RBP1.44□□□□□ -2.18
VPS41-213ENST00000485955 HCP5Q6MZN7 132 aa1.44□□□□□ -2.18
VPS41-213ENST00000485955 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.44□□□□□ -2.18
VPS41-213ENST00000485955 SERP2Q8N6R1 65 aa1.44□□□□□ -2.18
VPS41-213ENST00000485955 SPTSSBQ8NFR3 76 aa1.44□□□□□ -2.18
VPS41-213ENST00000485955 OR10AG1Q8NH19 301 aa1.44□□□□□ -2.18
VPS41-213ENST00000485955 CMTM2Q8TAZ6 248 aa1.44□□□□□ -2.18
VPS41-213ENST00000485955 S100ZQ8WXG8 99 aa1.44□□□□□ -2.18
VPS41-213ENST00000485955 AMELYQ99218 206 aa1.44□□□□□ -2.18
VPS41-213ENST00000485955 TRGV9Q99603 122 aa1.44□□□□□ -2.18
VPS41-213ENST00000485955 Q9Y3F1 56 aa1.44□□□□□ -2.18
VPS41-213ENST00000485955 LHFPL6Q9Y693 200 aa1.44□□□□□ -2.18
VPS41-213ENST00000485955 CPAMD8Q8IZJ3 1885 aa1.43□□□□□ -2.18
VPS41-213ENST00000485955 ABCA1O95477 2261 aa1.43□□□□□ -2.18
VPS41-213ENST00000485955 HUWE1Q7Z6Z7 4374 aaKnown RBP1.43□□□□□ -2.18
VPS41-213ENST00000485955 STAB2Q8WWQ8 2551 aa1.43□□□□□ -2.18
VPS41-213ENST00000485955 MUC21A0A140T8X8 626 aa1.43□□□□□ -2.18
VPS41-213ENST00000485955 A0A1W2PPM0 123 aa1.43□□□□□ -2.18
VPS41-213ENST00000485955 C2orf70A6NJV1 201 aa1.43□□□□□ -2.18
VPS41-213ENST00000485955 CCL16O15467 120 aa1.43□□□□□ -2.18
VPS41-213ENST00000485955 CFDP00746 253 aaPredicted RBP1.43□□□□□ -2.18
VPS41-213ENST00000485955 IGLV6-57P01721 117 aa1.43□□□□□ -2.18
VPS41-213ENST00000485955 IGLC2P0DOY2 106 aa1.43□□□□□ -2.18
VPS41-213ENST00000485955 IGLC3P0DOY3 106 aa1.43□□□□□ -2.18
VPS41-213ENST00000485955 KRTAP26-1Q6PEX3 210 aa1.43□□□□□ -2.18
VPS41-213ENST00000485955 ZNF431Q8TF32 576 aaPredicted RBP1.43□□□□□ -2.18
VPS41-213ENST00000485955 Q9BRP9 147 aa1.43□□□□□ -2.18
VPS41-213ENST00000485955 CYP4F30PQ9H0H9 118 aa1.43□□□□□ -2.18
VPS41-213ENST00000485955 CDC42SE1Q9NRR8 79 aa1.43□□□□□ -2.18
VPS41-213ENST00000485955 NDUFB11Q9NX14 153 aa1.43□□□□□ -2.18
VPS41-213ENST00000485955 PSORS1C2Q9UIG4 136 aa1.43□□□□□ -2.18
VPS41-213ENST00000485955 R4GN34 69 aa1.43□□□□□ -2.18
VPS41-213ENST00000485955 CCDC88CQ9P219 2028 aa1.43□□□□□ -2.18
VPS41-213ENST00000485955 FAT2Q9NYQ8 4349 aa1.43□□□□□ -2.18
VPS41-213ENST00000485955 ALMS1Q8TCU4 4167 aa1.43□□□□□ -2.18
VPS41-213ENST00000485955 A0A1W2PNM2 257 aa1.42□□□□□ -2.18
VPS41-213ENST00000485955 HCG22E2RYF7 251 aa1.42□□□□□ -2.18
VPS41-213ENST00000485955 CD52P31358 61 aa1.42□□□□□ -2.18
VPS41-213ENST00000485955 KRTAP13-4Q3LI77 160 aa1.42□□□□□ -2.18
VPS41-213ENST00000485955 ETDBQ3ZM63 59 aa1.42□□□□□ -2.18
VPS41-213ENST00000485955 BVES-AS1Q5T3Y7 98 aa1.42□□□□□ -2.18
VPS41-213ENST00000485955 CYP2G1PQ6ZSU1 146 aa1.42□□□□□ -2.18
VPS41-213ENST00000485955 CLECL1Q8IZS7 167 aa1.42□□□□□ -2.18
VPS41-213ENST00000485955 DEFB119Q8N690 84 aa1.42□□□□□ -2.18
VPS41-213ENST00000485955 C9orf163Q8N9P6 203 aa1.42□□□□□ -2.18
VPS41-213ENST00000485955 CYSTM1Q9H1C7 97 aa1.42□□□□□ -2.18
VPS41-213ENST00000485955 NXT2Q9NPJ8 142 aaKnown RBP1.42□□□□□ -2.18
VPS41-213ENST00000485955 PRO2289Q9P1D8 64 aa1.42□□□□□ -2.18
VPS41-213ENST00000485955 C22orf24Q9Y442 160 aa1.42□□□□□ -2.18
VPS41-213ENST00000485955 TANC2Q9HCD6 1990 aa1.41□□□□□ -2.18
VPS41-213ENST00000485955 CITO14578 2027 aa1.41□□□□□ -2.18
VPS41-213ENST00000485955 TRBV10-1A0A0K0K1A3 114 aa1.41□□□□□ -2.18
VPS41-213ENST00000485955 CXorf51AA0A1B0GTR3 108 aa1.41□□□□□ -2.18
VPS41-213ENST00000485955 TMEM30CPA0ZSE6 113 aa1.41□□□□□ -2.18
VPS41-213ENST00000485955 CTSGP08311 255 aa1.41□□□□□ -2.18
VPS41-213ENST00000485955 HRES1P13985 223 aa1.41□□□□□ -2.18
VPS41-213ENST00000485955 UBE2D3P61077 147 aa1.41□□□□□ -2.18
VPS41-213ENST00000485955 UBE2D2P62837 147 aa1.41□□□□□ -2.18
VPS41-213ENST00000485955 PDE6HQ13956 83 aa1.41□□□□□ -2.18
VPS41-213ENST00000485955 MPV17LQ2QL34 196 aa1.41□□□□□ -2.18
VPS41-213ENST00000485955 PYDC2Q56P42 97 aa1.41□□□□□ -2.18
VPS41-213ENST00000485955 NDUFA11Q86Y39 141 aa1.41□□□□□ -2.18
VPS41-213ENST00000485955 INTS1Q8N201 2190 aaKnown RBP1.41□□□□□ -2.18
VPS41-213ENST00000485955 TRAV12-3A0A0B4J271 114 aa1.4□□□□□ -2.19
VPS41-213ENST00000485955 A0A0G2JND7 137 aa1.4□□□□□ -2.19
VPS41-213ENST00000485955 KANTRA0A1W2PQU2 76 aa1.4□□□□□ -2.19
VPS41-213ENST00000485955 H7BZZ5 65 aa1.4□□□□□ -2.19
VPS41-213ENST00000485955 SIX6O95475 246 aa1.4□□□□□ -2.19
VPS41-213ENST00000485955 TFF1P04155 84 aa1.4□□□□□ -2.19
VPS41-213ENST00000485955 WFDC2Q14508 124 aa1.4□□□□□ -2.19
VPS41-213ENST00000485955 ELOBQ15370 118 aa1.4□□□□□ -2.19
VPS41-213ENST00000485955 HMGN3Q15651 99 aa1.4□□□□□ -2.19
VPS41-213ENST00000485955 PMCHL1Q16048 86 aa1.4□□□□□ -2.19
VPS41-213ENST00000485955 SPATA45Q537H7 98 aa1.4□□□□□ -2.19
VPS41-213ENST00000485955 C1orf137Q5JT78 98 aa1.4□□□□□ -2.19
VPS41-213ENST00000485955 LYPD5Q6UWN5 251 aa1.4□□□□□ -2.19
VPS41-213ENST00000485955 HEPN1Q6WQI6 88 aa1.4□□□□□ -2.19
VPS41-213ENST00000485955 Q6ZTI0 123 aa1.4□□□□□ -2.19
VPS41-213ENST00000485955 VMO1Q7Z5L0 202 aa1.4□□□□□ -2.19
VPS41-213ENST00000485955 FAM167A-AS1Q96KT0 104 aa1.4□□□□□ -2.19
VPS41-213ENST00000485955 TIMM21Q9BVV7 248 aa1.4□□□□□ -2.19
VPS41-213ENST00000485955 MANBALQ9NQG1 85 aa1.4□□□□□ -2.19
VPS41-213ENST00000485955 DMBT1Q9UGM3 2413 aaPredicted RBP1.4□□□□□ -2.19
VPS41-213ENST00000485955 UNC13CQ8NB66 2214 aa1.4□□□□□ -2.19
VPS41-213ENST00000485955 MALRD1Q5VYJ5 2156 aa1.4□□□□□ -2.19
VPS41-213ENST00000485955 FSIP2Q5CZC0 6907 aa1.39□□□□□ -2.19
VPS41-213ENST00000485955 DNAH11Q96DT5 4516 aa1.39□□□□□ -2.19
VPS41-213ENST00000485955 TRPM6Q9BX84 2022 aa1.39□□□□□ -2.19
VPS41-213ENST00000485955 TCHHQ07283 1943 aa1.39□□□□□ -2.19
VPS41-213ENST00000485955 TRAV23DV6A0A075B6W5 121 aa1.39□□□□□ -2.19
VPS41-213ENST00000485955 F2Z2F3 143 aa1.39□□□□□ -2.19
VPS41-213ENST00000485955 H3BUT2 72 aa1.39□□□□□ -2.19
VPS41-213ENST00000485955 J3QRE1 110 aa1.39□□□□□ -2.19
VPS41-213ENST00000485955 IGHV3-33P01772 117 aa1.39□□□□□ -2.19
VPS41-213ENST00000485955 UBE2D1P51668 147 aa1.39□□□□□ -2.19
VPS41-213ENST00000485955 SNRPFP62306 86 aaKnown RBP1.39□□□□□ -2.19
VPS41-213ENST00000485955 DEFB134Q4QY38 66 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 242.8 ms