RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-215ENST00000485883 A0A087X002 238 aa12□□□□□ -0.49
CHRD-215ENST00000485883 RPL28P46779 137 aaKnown RBP11.99□□□□□ -0.49
CHRD-215ENST00000485883 RPL24P83731 157 aaKnown RBP11.99□□□□□ -0.49
CHRD-215ENST00000485883 VPREB1P12018 145 aa11.98□□□□□ -0.49
CHRD-215ENST00000485883 LINC00158P58513 81 aa11.98□□□□□ -0.49
CHRD-215ENST00000485883 FABP4P15090 132 aa11.97□□□□□ -0.49
CHRD-215ENST00000485883 PLNP26678 52 aa11.96□□□□□ -0.49
CHRD-215ENST00000485883 SCO1O75880 301 aa11.95□□□□□ -0.5
CHRD-215ENST00000485883 HERV-K104P63124 156 aa11.95□□□□□ -0.5
CHRD-215ENST00000485883 ANAPC11Q9NYG5 84 aa11.95□□□□□ -0.5
CHRD-215ENST00000485883 IGKV2-28A0A075B6P5 120 aa11.94□□□□□ -0.5
CHRD-215ENST00000485883 A0A0U1RRA0 63 aa11.94□□□□□ -0.5
CHRD-215ENST00000485883 ATP6V1G1O75348 118 aa11.94□□□□□ -0.5
CHRD-215ENST00000485883 IGKV2D-28P01615 120 aa11.94□□□□□ -0.5
CHRD-215ENST00000485883 MEIG1Q5JSS6 88 aa11.94□□□□□ -0.5
CHRD-215ENST00000485883 DPM2O94777 84 aa11.93□□□□□ -0.5
CHRD-215ENST00000485883 TYMSOSQ8TAI1 123 aa11.93□□□□□ -0.5
CHRD-215ENST00000485883 NDUFA12Q9UI09 145 aa11.93□□□□□ -0.5
CHRD-215ENST00000485883 MYMXA0A1B0GTQ4 84 aa11.92□□□□□ -0.5
CHRD-215ENST00000485883 LINC00587B1AMM8 73 aa11.92□□□□□ -0.5
CHRD-215ENST00000485883 CRYGAP11844 174 aa11.92□□□□□ -0.5
CHRD-215ENST00000485883 UBE2AP49459 152 aa11.92□□□□□ -0.5
CHRD-215ENST00000485883 SMIM13P0DJ93 91 aa11.91□□□□□ -0.5
CHRD-215ENST00000485883 HERVK_113P61574 105 aa11.91□□□□□ -0.5
CHRD-215ENST00000485883 PLEKHB2Q96CS7 222 aa11.91□□□□□ -0.5
CHRD-215ENST00000485883 LEPROTO15243 131 aa11.9□□□□□ -0.5
CHRD-215ENST00000485883 Q8NDZ9 215 aa11.9□□□□□ -0.5
CHRD-215ENST00000485883 MAP1LC3CQ9BXW4 147 aa11.9□□□□□ -0.5
CHRD-215ENST00000485883 IGKCP01834 107 aa11.89□□□□□ -0.51
CHRD-215ENST00000485883 KRTAP13-2Q52LG2 175 aa11.89□□□□□ -0.51
CHRD-215ENST00000485883 PMCHL2Q9BQD1 86 aa11.89□□□□□ -0.51
CHRD-215ENST00000485883 FAT4Q6V0I7 4981 aa11.88□□□□□ -0.51
CHRD-215ENST00000485883 HIST1H2BKO60814 126 aa11.88□□□□□ -0.51
CHRD-215ENST00000485883 HIST1H2BJP06899 126 aa11.88□□□□□ -0.51
CHRD-215ENST00000485883 HIST1H2BOP23527 126 aa11.88□□□□□ -0.51
CHRD-215ENST00000485883 HIST1H2BBP33778 126 aa11.88□□□□□ -0.51
CHRD-215ENST00000485883 HIST1H2BDP58876 126 aa11.88□□□□□ -0.51
CHRD-215ENST00000485883 HIST1H2BCP62807 126 aa11.88□□□□□ -0.51
CHRD-215ENST00000485883 HIST2H2BEQ16778 126 aa11.88□□□□□ -0.51
CHRD-215ENST00000485883 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.88□□□□□ -0.51
CHRD-215ENST00000485883 MIR7-3HGQ8N6C7 128 aa11.88□□□□□ -0.51
CHRD-215ENST00000485883 HIST1H2BHQ93079 126 aa11.88□□□□□ -0.51
CHRD-215ENST00000485883 HIST1H2BNQ99877 126 aa11.88□□□□□ -0.51
CHRD-215ENST00000485883 HIST1H2BMQ99879 126 aa11.88□□□□□ -0.51
CHRD-215ENST00000485883 TSPEAR-AS2P59090 65 aa11.87□□□□□ -0.51
CHRD-215ENST00000485883 KRTAP13-1Q8IUC0 172 aa11.87□□□□□ -0.51
CHRD-215ENST00000485883 TMEM126AQ9H061 195 aa11.87□□□□□ -0.51
CHRD-215ENST00000485883 M0R378 163 aa11.86□□□□□ -0.51
CHRD-215ENST00000485883 BOD1L2Q8IYS8 172 aa11.86□□□□□ -0.51
CHRD-215ENST00000485883 RETNLBQ9BQ08 111 aa11.86□□□□□ -0.51
CHRD-215ENST00000485883 MUC17Q685J3 4493 aa11.85□□□□□ -0.51
CHRD-215ENST00000485883 TMEM238C9JI98 176 aa11.85□□□□□ -0.51
CHRD-215ENST00000485883 J3QQQ9 107 aa11.85□□□□□ -0.51
CHRD-215ENST00000485883 FAM19A1Q7Z5A9 133 aa11.85□□□□□ -0.51
CHRD-215ENST00000485883 A0A0U1RQV1 116 aa11.84□□□□□ -0.51
CHRD-215ENST00000485883 LGALS3P17931 250 aaKnown RBP11.84□□□□□ -0.51
CHRD-215ENST00000485883 NMUP48645 174 aa11.84□□□□□ -0.51
CHRD-215ENST00000485883 PRLHP81277 87 aa11.83□□□□□ -0.52
CHRD-215ENST00000485883 KRTAP9-2Q9BYQ4 174 aa11.81□□□□□ -0.52
CHRD-215ENST00000485883 SYS1-DBNDD2H3BUS1 97 aa11.8□□□□□ -0.52
CHRD-215ENST00000485883 IGKV2D-26A0A0A0MRZ7 120 aa11.79□□□□□ -0.52
CHRD-215ENST00000485883 NCR3O14931 201 aa11.79□□□□□ -0.52
CHRD-215ENST00000485883 LCE2AQ5TA79 106 aaPredicted RBP11.79□□□□□ -0.52
CHRD-215ENST00000485883 LINC00304Q8N9R0 145 aa11.79□□□□□ -0.52
CHRD-215ENST00000485883 FAM229BQ4G0N7 80 aa11.78□□□□□ -0.52
CHRD-215ENST00000485883 E9PLD3 99 aa11.77□□□□□ -0.53
CHRD-215ENST00000485883 PRYO14603 147 aa11.77□□□□□ -0.53
CHRD-215ENST00000485883 DAND5Q8N907 189 aa11.77□□□□□ -0.53
CHRD-215ENST00000485883 PET117Q6UWS5 81 aa11.76□□□□□ -0.53
CHRD-215ENST00000485883 MIEN1Q9BRT3 115 aa11.76□□□□□ -0.53
CHRD-215ENST00000485883 LOC107984156A0A0G2JMH3 177 aa11.75□□□□□ -0.53
CHRD-215ENST00000485883 S100A12P80511 92 aa11.75□□□□□ -0.53
CHRD-215ENST00000485883 ARL17AQ8IVW1 177 aa11.75□□□□□ -0.53
CHRD-215ENST00000485883 HIGD2AQ9BW72 106 aa11.75□□□□□ -0.53
CHRD-215ENST00000485883 COA6Q5JTJ3 125 aaKnown RBP11.74□□□□□ -0.53
CHRD-215ENST00000485883 LINC01545Q5VT33 79 aa11.74□□□□□ -0.53
CHRD-215ENST00000485883 KCNQ1DNQ9H478 68 aa11.73□□□□□ -0.53
CHRD-215ENST00000485883 TRBV10-3A0A0K0K1G6 114 aa11.72□□□□□ -0.53
CHRD-215ENST00000485883 A0A0J9YXY3 114 aa11.71□□□□□ -0.53
CHRD-215ENST00000485883 TRBV10-2A0A0K0K1G8 114 aa11.71□□□□□ -0.53
CHRD-215ENST00000485883 LINC00337Q8N6G1 96 aa11.71□□□□□ -0.53
CHRD-215ENST00000485883 CDIP1Q9H305 208 aa11.71□□□□□ -0.53
CHRD-215ENST00000485883 SPANXB1Q9NS25 103 aaPredicted RBP11.71□□□□□ -0.53
CHRD-215ENST00000485883 IGLV7-46A0A075B6I9 117 aa11.7□□□□□ -0.54
CHRD-215ENST00000485883 ETDCA0A1B0GVM5 59 aa11.7□□□□□ -0.54
CHRD-215ENST00000485883 C3orf79P0CE67 100 aa11.7□□□□□ -0.54
CHRD-215ENST00000485883 SPRR1AP35321 89 aa11.7□□□□□ -0.54
CHRD-215ENST00000485883 TPRXLQ17RH7 258 aa11.7□□□□□ -0.54
CHRD-215ENST00000485883 C3orf22Q8N5N4 141 aa11.7□□□□□ -0.54
CHRD-215ENST00000485883 KRTDAPP60985 99 aa11.69□□□□□ -0.54
CHRD-215ENST00000485883 NDUFC2O95298 119 aa11.68□□□□□ -0.54
CHRD-215ENST00000485883 DDTP30046 118 aa11.68□□□□□ -0.54
CHRD-215ENST00000485883 ZNF706Q9Y5V0 76 aaPredicted RBP11.68□□□□□ -0.54
CHRD-215ENST00000485883 C20orf202A1L168 122 aa11.67□□□□□ -0.54
CHRD-215ENST00000485883 ADAMTSL4-AS1Q5T5F5 129 aa11.66□□□□□ -0.54
CHRD-215ENST00000485883 KRTAP4-16G5E9R7 235 aaPredicted RBP11.65□□□□□ -0.54
CHRD-215ENST00000485883 NPC2P61916 151 aa11.65□□□□□ -0.54
CHRD-215ENST00000485883 S100A7L2Q5SY68 101 aa11.65□□□□□ -0.54
CHRD-215ENST00000485883 SPRR4Q96PI1 79 aa11.65□□□□□ -0.54
CHRD-215ENST00000485883 ZNF815PA8K554 130 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms