RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 SCO1O75880 301 aa8.04□□□□□ -1.12
SCAF4-206ENST00000485790 VPREB1P12018 145 aa8.04□□□□□ -1.12
SCAF4-206ENST00000485790 LINC00158P58513 81 aa8.04□□□□□ -1.12
SCAF4-206ENST00000485790 C10orf91Q5T1B1 145 aa8.04□□□□□ -1.12
SCAF4-206ENST00000485790 TMEM238C9JI98 176 aa8.03□□□□□ -1.12
SCAF4-206ENST00000485790 PRLHP81277 87 aa8.03□□□□□ -1.12
SCAF4-206ENST00000485790 IFITM2Q01629 132 aa8.03□□□□□ -1.12
SCAF4-206ENST00000485790 KRTAP13-2Q52LG2 175 aa8.03□□□□□ -1.12
SCAF4-206ENST00000485790 C18orf32Q8TCD1 76 aa8.03□□□□□ -1.12
SCAF4-206ENST00000485790 PLEKHB2Q96CS7 222 aa8.02□□□□□ -1.13
SCAF4-206ENST00000485790 CHTOPQ9Y3Y2 248 aaKnown RBP8.02□□□□□ -1.13
SCAF4-206ENST00000485790 A0A096LNJ9 63 aa8.01□□□□□ -1.13
SCAF4-206ENST00000485790 M0R378 163 aa8.01□□□□□ -1.13
SCAF4-206ENST00000485790 PMCHL1Q16048 86 aa8.01□□□□□ -1.13
SCAF4-206ENST00000485790 C4orf48Q5BLP8 95 aa8.01□□□□□ -1.13
SCAF4-206ENST00000485790 SPAG11AQ6PDA7 123 aa8.01□□□□□ -1.13
SCAF4-206ENST00000485790 CDIP1Q9H305 208 aa8.01□□□□□ -1.13
SCAF4-206ENST00000485790 C11orf86A6NJI1 115 aa8□□□□□ -1.13
SCAF4-206ENST00000485790 LINC00587B1AMM8 73 aa8□□□□□ -1.13
SCAF4-206ENST00000485790 HIGD2AQ9BW72 106 aa8□□□□□ -1.13
SCAF4-206ENST00000485790 IGLV7-46A0A075B6I9 117 aa7.99□□□□□ -1.13
SCAF4-206ENST00000485790 NDUFA5Q16718 116 aa7.99□□□□□ -1.13
SCAF4-206ENST00000485790 URB1-AS1Q96HZ7 61 aa7.99□□□□□ -1.13
SCAF4-206ENST00000485790 ZNF706Q9Y5V0 76 aaPredicted RBP7.99□□□□□ -1.13
SCAF4-206ENST00000485790 S100A12P80511 92 aa7.98□□□□□ -1.13
SCAF4-206ENST00000485790 RETNLBQ9BQ08 111 aa7.98□□□□□ -1.13
SCAF4-206ENST00000485790 A0A0U1RRA0 63 aa7.97□□□□□ -1.13
SCAF4-206ENST00000485790 SNAPINO95295 136 aa7.97□□□□□ -1.13
SCAF4-206ENST00000485790 APOC3P02656 99 aa7.97□□□□□ -1.13
SCAF4-206ENST00000485790 CHCHD1Q96BP2 118 aaKnown RBP7.97□□□□□ -1.13
SCAF4-206ENST00000485790 TRAV12-1A0A0B4J245 112 aa7.96□□□□□ -1.14
SCAF4-206ENST00000485790 TMEM223A0PJW6 202 aa7.96□□□□□ -1.14
SCAF4-206ENST00000485790 HERV-K104P63124 156 aa7.96□□□□□ -1.14
SCAF4-206ENST00000485790 SVBPQ8N300 66 aa7.96□□□□□ -1.14
SCAF4-206ENST00000485790 TPRXLQ17RH7 258 aa7.95□□□□□ -1.14
SCAF4-206ENST00000485790 MEIG1Q5JSS6 88 aa7.95□□□□□ -1.14
SCAF4-206ENST00000485790 BOD1L2Q8IYS8 172 aa7.95□□□□□ -1.14
SCAF4-206ENST00000485790 IFI27L1Q96BM0 104 aa7.95□□□□□ -1.14
SCAF4-206ENST00000485790 MAP1LC3CQ9BXW4 147 aa7.95□□□□□ -1.14
SCAF4-206ENST00000485790 LORP23490 312 aaPredicted RBP7.94□□□□□ -1.14
SCAF4-206ENST00000485790 SMIM13P0DJ93 91 aa7.93□□□□□ -1.14
SCAF4-206ENST00000485790 Q8NDZ9 215 aa7.93□□□□□ -1.14
SCAF4-206ENST00000485790 SPRR4Q96PI1 79 aa7.93□□□□□ -1.14
SCAF4-206ENST00000485790 PPDPFQ9H3Y8 114 aa7.93□□□□□ -1.14
SCAF4-206ENST00000485790 MYMXA0A1B0GTQ4 84 aa7.92□□□□□ -1.14
SCAF4-206ENST00000485790 ETDCA0A1B0GVM5 59 aa7.92□□□□□ -1.14
SCAF4-206ENST00000485790 PRYO14603 147 aa7.92□□□□□ -1.14
SCAF4-206ENST00000485790 C3orf22Q8N5N4 141 aa7.92□□□□□ -1.14
SCAF4-206ENST00000485790 LINC00337Q8N6G1 96 aa7.92□□□□□ -1.14
SCAF4-206ENST00000485790 MIR7-3HGQ8N6C7 128 aa7.91□□□□□ -1.14
SCAF4-206ENST00000485790 SMCR5Q8TEV8 140 aa7.91□□□□□ -1.14
SCAF4-206ENST00000485790 KCNQ1DNQ9H478 68 aa7.91□□□□□ -1.14
SCAF4-206ENST00000485790 HSBP1O75506 76 aa7.9□□□□□ -1.14
SCAF4-206ENST00000485790 FP248Q71RG6 208 aaPredicted RBP7.9□□□□□ -1.14
SCAF4-206ENST00000485790 NDUFA12Q9UI09 145 aa7.9□□□□□ -1.14
SCAF4-206ENST00000485790 NCR3O14931 201 aa7.88□□□□□ -1.15
SCAF4-206ENST00000485790 SPINK1P00995 79 aa7.88□□□□□ -1.15
SCAF4-206ENST00000485790 SPRR1AP35321 89 aa7.87□□□□□ -1.15
SCAF4-206ENST00000485790 Q8NBF4 154 aa7.87□□□□□ -1.15
SCAF4-206ENST00000485790 H0Y8G0 127 aa7.86□□□□□ -1.15
SCAF4-206ENST00000485790 FAM19A2Q8N3H0 131 aa7.86□□□□□ -1.15
SCAF4-206ENST00000485790 TRBV10-3A0A0K0K1G6 114 aa7.85□□□□□ -1.15
SCAF4-206ENST00000485790 GAGE2AQ6NT46 116 aa7.85□□□□□ -1.15
SCAF4-206ENST00000485790 DAND5Q8N907 189 aa7.85□□□□□ -1.15
SCAF4-206ENST00000485790 MIEN1Q9BRT3 115 aa7.85□□□□□ -1.15
SCAF4-206ENST00000485790 TRBV10-2A0A0K0K1G8 114 aa7.84□□□□□ -1.15
SCAF4-206ENST00000485790 LEPROTO15243 131 aa7.84□□□□□ -1.15
SCAF4-206ENST00000485790 LEPROTL1O95214 131 aa7.84□□□□□ -1.15
SCAF4-206ENST00000485790 PLNP26678 52 aa7.84□□□□□ -1.15
SCAF4-206ENST00000485790 SSBP3-AS1Q7Z2R9 100 aa7.84□□□□□ -1.15
SCAF4-206ENST00000485790 LOC107984156A0A0G2JMH3 177 aa7.83□□□□□ -1.16
SCAF4-206ENST00000485790 KRTAP4-16G5E9R7 235 aaPredicted RBP7.83□□□□□ -1.16
SCAF4-206ENST00000485790 DDTP30046 118 aa7.83□□□□□ -1.16
SCAF4-206ENST00000485790 HERVK_113P61574 105 aa7.83□□□□□ -1.16
SCAF4-206ENST00000485790 S100A7L2Q5SY68 101 aa7.83□□□□□ -1.16
SCAF4-206ENST00000485790 ARL17AQ8IVW1 177 aa7.83□□□□□ -1.16
SCAF4-206ENST00000485790 HSPB8Q9UJY1 196 aa7.83□□□□□ -1.16
SCAF4-206ENST00000485790 B5MCH6 92 aa7.82□□□□□ -1.16
SCAF4-206ENST00000485790 NMUP48645 174 aa7.82□□□□□ -1.16
SCAF4-206ENST00000485790 JOSD1Q15040 202 aaPredicted RBP7.82□□□□□ -1.16
SCAF4-206ENST00000485790 LINC00483Q53H64 154 aa7.82□□□□□ -1.16
SCAF4-206ENST00000485790 YPEL4Q96NS1 127 aa7.82□□□□□ -1.16
SCAF4-206ENST00000485790 J3QQQ9 107 aa7.81□□□□□ -1.16
SCAF4-206ENST00000485790 LGALS3P17931 250 aaKnown RBP7.81□□□□□ -1.16
SCAF4-206ENST00000485790 FAT4Q6V0I7 4981 aa7.81□□□□□ -1.16
SCAF4-206ENST00000485790 IGLV9-49A0A0B4J1Y8 123 aa7.8□□□□□ -1.16
SCAF4-206ENST00000485790 DPM2O94777 84 aa7.8□□□□□ -1.16
SCAF4-206ENST00000485790 SPANXB1Q9NS25 103 aaPredicted RBP7.8□□□□□ -1.16
SCAF4-206ENST00000485790 CBY1Q9Y3M2 126 aa7.8□□□□□ -1.16
SCAF4-206ENST00000485790 SLC25A20O43772 301 aa7.79□□□□□ -1.16
SCAF4-206ENST00000485790 NDUFC2O95298 119 aa7.79□□□□□ -1.16
SCAF4-206ENST00000485790 TRGC2P03986 189 aa7.79□□□□□ -1.16
SCAF4-206ENST00000485790 HINT1P49773 126 aaPredicted RBP7.79□□□□□ -1.16
SCAF4-206ENST00000485790 FABP4P15090 132 aa7.78□□□□□ -1.16
SCAF4-206ENST00000485790 SEC61BP60468 96 aaKnown RBP7.78□□□□□ -1.16
SCAF4-206ENST00000485790 RPS29P62273 56 aaKnown RBP7.78□□□□□ -1.16
SCAF4-206ENST00000485790 MOBPQ13875 183 aa7.78□□□□□ -1.16
SCAF4-206ENST00000485790 KRTAP13-3Q3SY46 172 aa7.78□□□□□ -1.16
SCAF4-206ENST00000485790 KRTAP9-2Q9BYQ4 174 aa7.78□□□□□ -1.16
SCAF4-206ENST00000485790 SERF1AO75920 110 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms