RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.66□□□□□ -1.98
RTN4-213ENST00000485749 UNC13CQ8NB66 2214 aa2.65□□□□□ -1.98
RTN4-213ENST00000485749 KLK9Q2XQG4 91 aa2.65□□□□□ -1.99
RTN4-213ENST00000485749 DEFB112Q30KQ8 113 aa2.65□□□□□ -1.99
RTN4-213ENST00000485749 DEFB109BQ30KR1 87 aa2.65□□□□□ -1.99
RTN4-213ENST00000485749 OBSCN-AS1Q96MR7 158 aa2.65□□□□□ -1.99
RTN4-213ENST00000485749 PLAC8Q9NZF1 115 aa2.65□□□□□ -1.99
RTN4-213ENST00000485749 DIDO1Q9BTC0 2240 aaKnown RBP2.65□□□□□ -1.99
RTN4-213ENST00000485749 BRCA2P51587 3418 aa2.65□□□□□ -1.99
RTN4-213ENST00000485749 MED12Q93074 2177 aa2.64□□□□□ -1.99
RTN4-213ENST00000485749 A0A1B0GVY2 172 aa2.64□□□□□ -1.99
RTN4-213ENST00000485749 IGIPA6NJ69 53 aa2.64□□□□□ -1.99
RTN4-213ENST00000485749 RPL37AP61513 92 aaKnown RBP2.64□□□□□ -1.99
RTN4-213ENST00000485749 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
RTN4-213ENST00000485749 MALRD1Q5VYJ5 2156 aa2.64□□□□□ -1.99
RTN4-213ENST00000485749 ASXL3Q9C0F0 2248 aa2.63□□□□□ -1.99
RTN4-213ENST00000485749 TRGV4A0A0C4DH28 118 aa2.63□□□□□ -1.99
RTN4-213ENST00000485749 LCE6AA0A183 80 aa2.63□□□□□ -1.99
RTN4-213ENST00000485749 NDPQ00604 133 aa2.63□□□□□ -1.99
RTN4-213ENST00000485749 RPL39LQ96EH5 51 aaKnown RBP2.63□□□□□ -1.99
RTN4-213ENST00000485749 USF3Q68DE3 2245 aa2.62□□□□□ -1.99
RTN4-213ENST00000485749 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
RTN4-213ENST00000485749 I3L3M4 83 aa2.62□□□□□ -1.99
RTN4-213ENST00000485749 NDUFA4O00483 81 aa2.62□□□□□ -1.99
RTN4-213ENST00000485749 POLR2KP53803 58 aaKnown RBP2.62□□□□□ -1.99
RTN4-213ENST00000485749 SPINK7P58062 85 aa2.62□□□□□ -1.99
RTN4-213ENST00000485749 KRTAP10-3P60369 221 aa2.62□□□□□ -1.99
RTN4-213ENST00000485749 SPATA8Q6RVD6 105 aa2.62□□□□□ -1.99
RTN4-213ENST00000485749 SPRR4Q96PI1 79 aa2.62□□□□□ -1.99
RTN4-213ENST00000485749 RTTNQ86VV8 2226 aa2.62□□□□□ -1.99
RTN4-213ENST00000485749 CABIN1Q9Y6J0 2220 aa2.62□□□□□ -1.99
RTN4-213ENST00000485749 CHD7Q9P2D1 2997 aa2.61□□□□□ -1.99
RTN4-213ENST00000485749 H3BUA1 57 aa2.61□□□□□ -1.99
RTN4-213ENST00000485749 USMG5Q96IX5 58 aa2.61□□□□□ -1.99
RTN4-213ENST00000485749 CHD9Q3L8U1 2897 aa2.61□□□□□ -1.99
RTN4-213ENST00000485749 ASCC3Q8N3C0 2202 aaKnown RBP2.61□□□□□ -1.99
RTN4-213ENST00000485749 ESPL1Q14674 2120 aa2.6□□□□□ -1.99
RTN4-213ENST00000485749 SDK2Q58EX2 2172 aa2.6□□□□□ -1.99
RTN4-213ENST00000485749 A0A1W2PNN7 141 aa2.6□□□□□ -1.99
RTN4-213ENST00000485749 HRES1P13985 223 aa2.6□□□□□ -1.99
RTN4-213ENST00000485749 PRB3Q04118 309 aaPredicted RBP2.6□□□□□ -1.99
RTN4-213ENST00000485749 PRR9Q5T870 116 aa2.6□□□□□ -1.99
RTN4-213ENST00000485749 ZCCHC13Q8WW36 166 aaKnown RBP2.6□□□□□ -1.99
RTN4-213ENST00000485749 HEATR1Q9H583 2144 aaKnown RBP2.6□□□□□ -1.99
RTN4-213ENST00000485749 COL27A1Q8IZC6 1860 aaPredicted RBP2.6□□□□□ -1.99
RTN4-213ENST00000485749 PI4KAP42356 2102 aa2.59□□□□□ -1.99
RTN4-213ENST00000485749 FREM1Q5H8C1 2179 aa2.59□□□□□ -1.99
RTN4-213ENST00000485749 KIAA0100Q14667 2235 aaKnown RBP2.59□□□□□ -1.99
RTN4-213ENST00000485749 IGKV2-29A2NJV5 120 aaPredicted RBP2.59□□□□□ -1.99
RTN4-213ENST00000485749 LYNX1G3V0Z9 82 aa2.59□□□□□ -1.99
RTN4-213ENST00000485749 M0QY20 66 aa2.59□□□□□ -1.99
RTN4-213ENST00000485749 LYNX1P0DP58 116 aa2.59□□□□□ -1.99
RTN4-213ENST00000485749 LINC00315P59091 139 aa2.59□□□□□ -1.99
RTN4-213ENST00000485749 RPL39P62891 51 aaKnown RBP2.59□□□□□ -1.99
RTN4-213ENST00000485749 CACNA1EQ15878 2313 aa2.59□□□□□ -2
RTN4-213ENST00000485749 KNL1Q8NG31 2342 aa2.59□□□□□ -2
RTN4-213ENST00000485749 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.58□□□□□ -2
RTN4-213ENST00000485749 A0A087WTM6 91 aa2.58□□□□□ -2
RTN4-213ENST00000485749 A0A0G2JQZ4 141 aa2.58□□□□□ -2
RTN4-213ENST00000485749 NBDYA0A0U1RRE5 68 aa2.58□□□□□ -2
RTN4-213ENST00000485749 H0YGX0 51 aa2.58□□□□□ -2
RTN4-213ENST00000485749 NDUFA1O15239 70 aa2.58□□□□□ -2
RTN4-213ENST00000485749 HAMPP81172 84 aa2.58□□□□□ -2
RTN4-213ENST00000485749 DEFB114Q30KQ6 69 aa2.58□□□□□ -2
RTN4-213ENST00000485749 C5orf56Q8N8D9 126 aa2.58□□□□□ -2
RTN4-213ENST00000485749 DEFB124Q8NES8 71 aa2.58□□□□□ -2
RTN4-213ENST00000485749 TRGV2A0A075B6R0 118 aa2.57□□□□□ -2
RTN4-213ENST00000485749 TRGV1A0A0A0MS02 117 aa2.57□□□□□ -2
RTN4-213ENST00000485749 G3V318 75 aa2.57□□□□□ -2
RTN4-213ENST00000485749 ACYP2P14621 99 aa2.57□□□□□ -2
RTN4-213ENST00000485749 ZNF625Q96I27 306 aaPredicted RBP2.57□□□□□ -2
RTN4-213ENST00000485749 RHPN1-AS1Q9BWJ2 59 aa2.57□□□□□ -2
RTN4-213ENST00000485749 PRO3102Q9H379 93 aa2.57□□□□□ -2
RTN4-213ENST00000485749 TRANK1O15050 2925 aa2.57□□□□□ -2
RTN4-213ENST00000485749 A0A1B0GU69 56 aa2.56□□□□□ -2
RTN4-213ENST00000485749 IGKV4-1P06312 121 aa2.56□□□□□ -2
RTN4-213ENST00000485749 KRTAP1-4P0C5Y4 121 aa2.56□□□□□ -2
RTN4-213ENST00000485749 COA5Q86WW8 74 aa2.56□□□□□ -2
RTN4-213ENST00000485749 LINC00308Q8TCZ7 52 aa2.56□□□□□ -2
RTN4-213ENST00000485749 UNC80Q8N2C7 3258 aa2.56□□□□□ -2
RTN4-213ENST00000485749 ZGRF1Q86YA3 2104 aa2.56□□□□□ -2
RTN4-213ENST00000485749 CACNA1DQ01668 2161 aa2.56□□□□□ -2
RTN4-213ENST00000485749 CACNA1GO43497 2377 aa2.56□□□□□ -2
RTN4-213ENST00000485749 ETDCA0A1B0GVM5 59 aa2.55□□□□□ -2
RTN4-213ENST00000485749 MKI67P46013 3256 aaKnown RBP2.55□□□□□ -2
RTN4-213ENST00000485749 PRR14LQ5THK1 2151 aa2.55□□□□□ -2
RTN4-213ENST00000485749 DOCK10Q96BY6 2186 aa2.55□□□□□ -2
RTN4-213ENST00000485749 TNCP24821 2201 aa2.54□□□□□ -2
RTN4-213ENST00000485749 C5orf42Q9H799 3197 aa2.54□□□□□ -2
RTN4-213ENST00000485749 COX7BP24311 80 aa2.54□□□□□ -2
RTN4-213ENST00000485749 IGLV4-60A0A075B6I1 120 aa2.53□□□□□ -2
RTN4-213ENST00000485749 LOC110117498A0A087WWA1 95 aa2.53□□□□□ -2
RTN4-213ENST00000485749 TPRXLQ17RH7 258 aa2.53□□□□□ -2
RTN4-213ENST00000485749 SPINK13Q1W4C9 94 aa2.53□□□□□ -2
RTN4-213ENST00000485749 LINC00304Q8N9R0 145 aa2.53□□□□□ -2
RTN4-213ENST00000485749 DEFB104AQ8WTQ1 72 aa2.53□□□□□ -2
RTN4-213ENST00000485749 Q96NJ1 140 aa2.53□□□□□ -2
RTN4-213ENST00000485749 ANAPC11Q9NYG5 84 aa2.53□□□□□ -2
RTN4-213ENST00000485749 CDKN2A-AS1Q9UH64 79 aa2.53□□□□□ -2
RTN4-213ENST00000485749 BRWD1Q9NSI6 2320 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms