RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 HERV-K104P63124 156 aa7.63□□□□□ -1.19
PTCD1-205ENST00000485746 HIST2H2BEQ16778 126 aa7.63□□□□□ -1.19
PTCD1-205ENST00000485746 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.63□□□□□ -1.19
PTCD1-205ENST00000485746 HIST1H2BHQ93079 126 aa7.63□□□□□ -1.19
PTCD1-205ENST00000485746 PLEKHB2Q96CS7 222 aa7.63□□□□□ -1.19
PTCD1-205ENST00000485746 HIST1H2BNQ99877 126 aa7.63□□□□□ -1.19
PTCD1-205ENST00000485746 HIST1H2BMQ99879 126 aa7.63□□□□□ -1.19
PTCD1-205ENST00000485746 PMCHL2Q9BQD1 86 aa7.63□□□□□ -1.19
PTCD1-205ENST00000485746 NDUFA12Q9UI09 145 aa7.63□□□□□ -1.19
PTCD1-205ENST00000485746 LRP1Q07954 4544 aaKnown RBP7.62□□□□□ -1.19
PTCD1-205ENST00000485746 IGLV5-37A0A075B6J1 123 aa7.62□□□□□ -1.19
PTCD1-205ENST00000485746 H0Y9J4 135 aa7.62□□□□□ -1.19
PTCD1-205ENST00000485746 LEPROTO15243 131 aa7.62□□□□□ -1.19
PTCD1-205ENST00000485746 HERC1Q15751 4861 aa7.61□□□□□ -1.19
PTCD1-205ENST00000485746 ZNF861PO60384 105 aa7.61□□□□□ -1.19
PTCD1-205ENST00000485746 BCE1O60756 84 aa7.61□□□□□ -1.19
PTCD1-205ENST00000485746 SMIM13P0DJ93 91 aa7.61□□□□□ -1.19
PTCD1-205ENST00000485746 IGKV2-28A0A075B6P5 120 aa7.6□□□□□ -1.19
PTCD1-205ENST00000485746 IGKV2D-28P01615 120 aa7.6□□□□□ -1.19
PTCD1-205ENST00000485746 LGALS3P17931 250 aaKnown RBP7.6□□□□□ -1.19
PTCD1-205ENST00000485746 RPL28P46779 137 aaKnown RBP7.6□□□□□ -1.19
PTCD1-205ENST00000485746 LCE2DQ5TA82 110 aaPredicted RBP7.6□□□□□ -1.19
PTCD1-205ENST00000485746 VPREB1P12018 145 aa7.59□□□□□ -1.19
PTCD1-205ENST00000485746 UBE2AP49459 152 aa7.59□□□□□ -1.19
PTCD1-205ENST00000485746 J3QQQ9 107 aa7.58□□□□□ -1.2
PTCD1-205ENST00000485746 KRTAP10-8P60410 259 aa7.58□□□□□ -1.2
PTCD1-205ENST00000485746 MIR7-3HGQ8N6C7 128 aa7.58□□□□□ -1.2
PTCD1-205ENST00000485746 SYS1-DBNDD2H3BUS1 97 aa7.57□□□□□ -1.2
PTCD1-205ENST00000485746 BOD1L2Q8IYS8 172 aa7.57□□□□□ -1.2
PTCD1-205ENST00000485746 PRR26Q8N8Z3 221 aa7.57□□□□□ -1.2
PTCD1-205ENST00000485746 S100A1P23297 94 aa7.56□□□□□ -1.2
PTCD1-205ENST00000485746 NMUP48645 174 aa7.56□□□□□ -1.2
PTCD1-205ENST00000485746 TSPEAR-AS2P59090 65 aa7.56□□□□□ -1.2
PTCD1-205ENST00000485746 IGLV1-50A0A075B6I6 118 aa7.55□□□□□ -1.2
PTCD1-205ENST00000485746 M0R378 163 aa7.55□□□□□ -1.2
PTCD1-205ENST00000485746 PET117Q6UWS5 81 aa7.55□□□□□ -1.2
PTCD1-205ENST00000485746 FAM19A1Q7Z5A9 133 aa7.55□□□□□ -1.2
PTCD1-205ENST00000485746 NCR3O14931 201 aa7.54□□□□□ -1.2
PTCD1-205ENST00000485746 KRTDAPP60985 99 aa7.54□□□□□ -1.2
PTCD1-205ENST00000485746 MIEN1Q9BRT3 115 aa7.54□□□□□ -1.2
PTCD1-205ENST00000485746 TMEM238C9JI98 176 aa7.53□□□□□ -1.2
PTCD1-205ENST00000485746 E9PLD3 99 aa7.53□□□□□ -1.2
PTCD1-205ENST00000485746 Q8NDZ9 215 aa7.53□□□□□ -1.2
PTCD1-205ENST00000485746 TMEM126AQ9H061 195 aa7.53□□□□□ -1.2
PTCD1-205ENST00000485746 C20orf202A1L168 122 aa7.52□□□□□ -1.21
PTCD1-205ENST00000485746 C3orf79P0CE67 100 aa7.52□□□□□ -1.21
PTCD1-205ENST00000485746 S100A12P80511 92 aa7.52□□□□□ -1.21
PTCD1-205ENST00000485746 LINC01545Q5VT33 79 aa7.52□□□□□ -1.21
PTCD1-205ENST00000485746 DAND5Q8N907 189 aa7.52□□□□□ -1.21
PTCD1-205ENST00000485746 RPL13AP40429 203 aaKnown RBP7.51□□□□□ -1.21
PTCD1-205ENST00000485746 PRLHP81277 87 aa7.51□□□□□ -1.21
PTCD1-205ENST00000485746 COA6Q5JTJ3 125 aaKnown RBP7.51□□□□□ -1.21
PTCD1-205ENST00000485746 KRTAP1-4P0C5Y4 121 aa7.5□□□□□ -1.21
PTCD1-205ENST00000485746 IGKV2D-26A0A0A0MRZ7 120 aa7.49□□□□□ -1.21
PTCD1-205ENST00000485746 A0A0J9YXY3 114 aa7.49□□□□□ -1.21
PTCD1-205ENST00000485746 PRYO14603 147 aa7.48□□□□□ -1.21
PTCD1-205ENST00000485746 CRYGAP11844 174 aa7.48□□□□□ -1.21
PTCD1-205ENST00000485746 S100A2P29034 98 aa7.48□□□□□ -1.21
PTCD1-205ENST00000485746 NPC2P61916 151 aa7.48□□□□□ -1.21
PTCD1-205ENST00000485746 KRTAP3-3Q9BYR6 98 aa7.48□□□□□ -1.21
PTCD1-205ENST00000485746 KRTAP3-2Q9BYR7 98 aa7.48□□□□□ -1.21
PTCD1-205ENST00000485746 ZNF815PA8K554 130 aa7.47□□□□□ -1.21
PTCD1-205ENST00000485746 S100A7L2Q5SY68 101 aa7.47□□□□□ -1.21
PTCD1-205ENST00000485746 KRTAP13-1Q8IUC0 172 aa7.47□□□□□ -1.21
PTCD1-205ENST00000485746 HIGD2AQ9BW72 106 aa7.47□□□□□ -1.21
PTCD1-205ENST00000485746 TRBV10-3A0A0K0K1G6 114 aa7.46□□□□□ -1.22
PTCD1-205ENST00000485746 ETDCA0A1B0GVM5 59 aa7.46□□□□□ -1.22
PTCD1-205ENST00000485746 DDTP30046 118 aa7.46□□□□□ -1.22
PTCD1-205ENST00000485746 TYMSOSQ8TAI1 123 aa7.46□□□□□ -1.22
PTCD1-205ENST00000485746 ANAPC11Q9NYG5 84 aa7.46□□□□□ -1.22
PTCD1-205ENST00000485746 LOC107984156A0A0G2JMH3 177 aa7.45□□□□□ -1.22
PTCD1-205ENST00000485746 S100A6P06703 90 aa7.45□□□□□ -1.22
PTCD1-205ENST00000485746 AKR1D1P51857 326 aa7.45□□□□□ -1.22
PTCD1-205ENST00000485746 ARL17AQ8IVW1 177 aa7.45□□□□□ -1.22
PTCD1-205ENST00000485746 SPANXB1Q9NS25 103 aaPredicted RBP7.45□□□□□ -1.22
PTCD1-205ENST00000485746 TNXBP22105 4242 aa7.44□□□□□ -1.22
PTCD1-205ENST00000485746 TRBV10-2A0A0K0K1G8 114 aa7.44□□□□□ -1.22
PTCD1-205ENST00000485746 ADAMTSL4-AS1Q5T5F5 129 aa7.44□□□□□ -1.22
PTCD1-205ENST00000485746 ATOH7Q8N100 152 aa7.44□□□□□ -1.22
PTCD1-205ENST00000485746 KCNQ1DNQ9H478 68 aa7.44□□□□□ -1.22
PTCD1-205ENST00000485746 NDUFC2O95298 119 aa7.43□□□□□ -1.22
PTCD1-205ENST00000485746 SCGB1D4Q6XE38 83 aa7.43□□□□□ -1.22
PTCD1-205ENST00000485746 TIMM17BO60830 172 aa7.42□□□□□ -1.22
PTCD1-205ENST00000485746 LINC00337Q8N6G1 96 aa7.42□□□□□ -1.22
PTCD1-205ENST00000485746 TTTY13Q9BZ97 58 aa7.42□□□□□ -1.22
PTCD1-205ENST00000485746 A0A087X002 238 aa7.41□□□□□ -1.22
PTCD1-205ENST00000485746 FAM229BQ4G0N7 80 aa7.41□□□□□ -1.22
PTCD1-205ENST00000485746 SOSTDC1Q6X4U4 206 aa7.41□□□□□ -1.22
PTCD1-205ENST00000485746 HIST3H2BBQ8N257 126 aa7.41□□□□□ -1.22
PTCD1-205ENST00000485746 OR13C6PQ8NH95 151 aa7.41□□□□□ -1.22
PTCD1-205ENST00000485746 ZNF706Q9Y5V0 76 aaPredicted RBP7.41□□□□□ -1.22
PTCD1-205ENST00000485746 TSPAN13O95857 204 aa7.4□□□□□ -1.22
PTCD1-205ENST00000485746 LINC00308Q8TCZ7 52 aa7.4□□□□□ -1.22
PTCD1-205ENST00000485746 SMCR5Q8TEV8 140 aa7.4□□□□□ -1.22
PTCD1-205ENST00000485746 CBY1Q9Y3M2 126 aa7.4□□□□□ -1.22
PTCD1-205ENST00000485746 HSBP1L1C9JCN9 74 aa7.39□□□□□ -1.23
PTCD1-205ENST00000485746 SPRR1AP35321 89 aa7.39□□□□□ -1.23
PTCD1-205ENST00000485746 ANKRD39Q53RE8 183 aa7.39□□□□□ -1.23
PTCD1-205ENST00000485746 TRAV23DV6A0A075B6W5 121 aa7.38□□□□□ -1.23
PTCD1-205ENST00000485746 EIF4EBP3O60516 100 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms