RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 CARD19Q96LW7 228 aa6.29□□□□□ -1.4
CTSA-208ENST00000485627 SND1-IT1Q9HBX3 110 aa6.29□□□□□ -1.4
CTSA-208ENST00000485627 C6orf48Q9UBA6 75 aa6.29□□□□□ -1.4
CTSA-208ENST00000485627 PRO1854Q9UHT4 67 aa6.29□□□□□ -1.4
CTSA-208ENST00000485627 H3BUT2 72 aa6.28□□□□□ -1.4
CTSA-208ENST00000485627 LECT2O14960 151 aa6.28□□□□□ -1.4
CTSA-208ENST00000485627 Q1RN00 199 aa6.28□□□□□ -1.4
CTSA-208ENST00000485627 SOSTDC1Q6X4U4 206 aa6.28□□□□□ -1.4
CTSA-208ENST00000485627 Q6ZRU5 148 aa6.28□□□□□ -1.4
CTSA-208ENST00000485627 RYR1P21817 5038 aa6.27□□□□□ -1.4
CTSA-208ENST00000485627 VAMP3Q15836 100 aa6.27□□□□□ -1.41
CTSA-208ENST00000485627 RNF151Q2KHN1 245 aa6.27□□□□□ -1.41
CTSA-208ENST00000485627 PLA2G2DQ9UNK4 145 aa6.27□□□□□ -1.41
CTSA-208ENST00000485627 TRAV13-2A0A0B4J235 113 aa6.26□□□□□ -1.41
CTSA-208ENST00000485627 H7C2G1 150 aa6.26□□□□□ -1.41
CTSA-208ENST00000485627 FABP2P12104 132 aa6.26□□□□□ -1.41
CTSA-208ENST00000485627 NAA38Q9BRA0 125 aaKnown RBP6.26□□□□□ -1.41
CTSA-208ENST00000485627 VPS13DQ5THJ4 4388 aa6.25□□□□□ -1.41
CTSA-208ENST00000485627 LOC107984156A0A0G2JMH3 177 aa6.25□□□□□ -1.41
CTSA-208ENST00000485627 NDUFC2-KCTD14E9PQ53 114 aa6.25□□□□□ -1.41
CTSA-208ENST00000485627 RPL13AP40429 203 aaKnown RBP6.25□□□□□ -1.41
CTSA-208ENST00000485627 PSMB2P49721 201 aa6.25□□□□□ -1.41
CTSA-208ENST00000485627 LYRM7Q5U5X0 104 aa6.25□□□□□ -1.41
CTSA-208ENST00000485627 ARL17AQ8IVW1 177 aa6.25□□□□□ -1.41
CTSA-208ENST00000485627 LINC00476Q8WZB0 136 aa6.25□□□□□ -1.41
CTSA-208ENST00000485627 A0A1W2PPM0 123 aa6.24□□□□□ -1.41
CTSA-208ENST00000485627 NDUFC2O95298 119 aa6.24□□□□□ -1.41
CTSA-208ENST00000485627 TSPAN13O95857 204 aa6.24□□□□□ -1.41
CTSA-208ENST00000485627 SCGB1C2P0DMR2 95 aa6.24□□□□□ -1.41
CTSA-208ENST00000485627 RPL18AQ02543 176 aaKnown RBP6.24□□□□□ -1.41
CTSA-208ENST00000485627 GAGE2EQ4V326 116 aa6.24□□□□□ -1.41
CTSA-208ENST00000485627 OR13C6PQ8NH95 151 aa6.24□□□□□ -1.41
CTSA-208ENST00000485627 GAGE2DQ9UEU5 116 aa6.24□□□□□ -1.41
CTSA-208ENST00000485627 ALMS1Q8TCU4 4167 aa6.24□□□□□ -1.41
CTSA-208ENST00000485627 COX6CP09669 75 aa6.23□□□□□ -1.41
CTSA-208ENST00000485627 C1orf134Q5TEV5 83 aa6.23□□□□□ -1.41
CTSA-208ENST00000485627 Q6ZR54 194 aa6.23□□□□□ -1.41
CTSA-208ENST00000485627 GTF2H5Q6ZYL4 71 aa6.23□□□□□ -1.41
CTSA-208ENST00000485627 GAGE10A6NGK3 116 aa6.22□□□□□ -1.41
CTSA-208ENST00000485627 TLX1NBP0CAT3 122 aa6.22□□□□□ -1.41
CTSA-208ENST00000485627 WFDC2Q14508 124 aa6.22□□□□□ -1.41
CTSA-208ENST00000485627 XAGE1AQ9HD64 81 aa6.22□□□□□ -1.41
CTSA-208ENST00000485627 PKIGQ9Y2B9 76 aa6.22□□□□□ -1.41
CTSA-208ENST00000485627 SPCS1Q9Y6A9 102 aa6.22□□□□□ -1.41
CTSA-208ENST00000485627 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.21□□□□□ -1.42
CTSA-208ENST00000485627 LOC107984640A0A0U1RRK4 108 aa6.21□□□□□ -1.42
CTSA-208ENST00000485627 SLPIP03973 132 aa6.21□□□□□ -1.42
CTSA-208ENST00000485627 CNBPP62633 177 aaKnown RBP6.21□□□□□ -1.42
CTSA-208ENST00000485627 S100A7L2Q5SY68 101 aa6.21□□□□□ -1.42
CTSA-208ENST00000485627 Q6ZRN7 208 aaPredicted RBP6.21□□□□□ -1.42
CTSA-208ENST00000485627 Q6ZRP5 223 aa6.21□□□□□ -1.42
CTSA-208ENST00000485627 IGKV2-28A0A075B6P5 120 aa6.2□□□□□ -1.42
CTSA-208ENST00000485627 NCR3O14931 201 aa6.2□□□□□ -1.42
CTSA-208ENST00000485627 IGKV2D-28P01615 120 aa6.2□□□□□ -1.42
CTSA-208ENST00000485627 GAGE2BQ13066 116 aa6.2□□□□□ -1.42
CTSA-208ENST00000485627 LINC00337Q8N6G1 96 aa6.2□□□□□ -1.42
CTSA-208ENST00000485627 KIAA1109Q2LD37 5005 aa6.19□□□□□ -1.42
CTSA-208ENST00000485627 TRBV10-2A0A0K0K1G8 114 aa6.19□□□□□ -1.42
CTSA-208ENST00000485627 LRCOL1A6NCL2 159 aa6.19□□□□□ -1.42
CTSA-208ENST00000485627 K7EP34 96 aa6.19□□□□□ -1.42
CTSA-208ENST00000485627 UBE2V1Q13404 147 aa6.19□□□□□ -1.42
CTSA-208ENST00000485627 TMEM126AQ9H061 195 aa6.19□□□□□ -1.42
CTSA-208ENST00000485627 TRBV20-1A0A075B6N2 111 aa6.18□□□□□ -1.42
CTSA-208ENST00000485627 TRIAP1O43715 76 aa6.18□□□□□ -1.42
CTSA-208ENST00000485627 PRR3P79522 188 aaKnown RBP6.18□□□□□ -1.42
CTSA-208ENST00000485627 Q8N814 137 aa6.18□□□□□ -1.42
CTSA-208ENST00000485627 NKAPP1Q8N9T2 125 aa6.18□□□□□ -1.42
CTSA-208ENST00000485627 DNAH10Q8IVF4 4471 aa6.17□□□□□ -1.42
CTSA-208ENST00000485627 A0A087WTM6 91 aa6.17□□□□□ -1.42
CTSA-208ENST00000485627 M0R378 163 aa6.17□□□□□ -1.42
CTSA-208ENST00000485627 CBY1Q9Y3M2 126 aa6.17□□□□□ -1.42
CTSA-208ENST00000485627 VPREB1P12018 145 aa6.16□□□□□ -1.42
CTSA-208ENST00000485627 RPL28P46779 137 aaKnown RBP6.16□□□□□ -1.42
CTSA-208ENST00000485627 C9orf129Q5T035 196 aaKnown RBP6.16□□□□□ -1.42
CTSA-208ENST00000485627 SMIM11BQ8TCY0 68 aa6.16□□□□□ -1.42
CTSA-208ENST00000485627 C16orf90A8MZG2 172 aa6.15□□□□□ -1.42
CTSA-208ENST00000485627 ATXN8Q156A1 80 aa6.15□□□□□ -1.42
CTSA-208ENST00000485627 C9orf163Q8N9P6 203 aa6.15□□□□□ -1.42
CTSA-208ENST00000485627 Q8NDZ9 215 aa6.15□□□□□ -1.42
CTSA-208ENST00000485627 HECTD4Q9Y4D8 3996 aa6.15□□□□□ -1.43
CTSA-208ENST00000485627 KMT2AQ03164 3969 aa6.14□□□□□ -1.43
CTSA-208ENST00000485627 IGKV2-24A0A0C4DH68 120 aa6.14□□□□□ -1.43
CTSA-208ENST00000485627 TCL1BO95988 128 aa6.14□□□□□ -1.43
CTSA-208ENST00000485627 KRTAP4-5Q9BYR2 181 aa6.14□□□□□ -1.43
CTSA-208ENST00000485627 DNAH6Q9C0G6 4158 aa6.14□□□□□ -1.43
CTSA-208ENST00000485627 H0YGX0 51 aa6.13□□□□□ -1.43
CTSA-208ENST00000485627 H3BMG7 143 aa6.13□□□□□ -1.43
CTSA-208ENST00000485627 IGLV6-57P01721 117 aa6.13□□□□□ -1.43
CTSA-208ENST00000485627 LINC00474Q9P2X8 69 aa6.13□□□□□ -1.43
CTSA-208ENST00000485627 A0A096LNI7 61 aa6.12□□□□□ -1.43
CTSA-208ENST00000485627 TRBV10-3A0A0K0K1G6 114 aa6.12□□□□□ -1.43
CTSA-208ENST00000485627 RTL8CO15255 209 aa6.12□□□□□ -1.43
CTSA-208ENST00000485627 SNCGO76070 127 aa6.12□□□□□ -1.43
CTSA-208ENST00000485627 SERTAD4-AS1Q5TG53 156 aa6.12□□□□□ -1.43
CTSA-208ENST00000485627 FAM19A5Q7Z5A7 132 aaPredicted RBP6.12□□□□□ -1.43
CTSA-208ENST00000485627 CLEC2BQ92478 149 aa6.12□□□□□ -1.43
CTSA-208ENST00000485627 DPH3Q96FX2 82 aa6.12□□□□□ -1.43
CTSA-208ENST00000485627 ABCA13Q86UQ4 5058 aa6.11□□□□□ -1.43
CTSA-208ENST00000485627 IGLV5-37A0A075B6J1 123 aa6.11□□□□□ -1.43
CTSA-208ENST00000485627 TRAV23DV6A0A075B6W5 121 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms