RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 CCL8P80075 99 aa-0.56□□□□□ -2.5
CCDC66-219ENST00000484441 TAF1AQ15573 450 aaPredicted RBP-0.56□□□□□ -2.5
CCDC66-219ENST00000484441 SAMD13Q5VXD3 122 aa-0.56□□□□□ -2.5
CCDC66-219ENST00000484441 Q6JHZ5 121 aa-0.56□□□□□ -2.5
CCDC66-219ENST00000484441 SERP2Q8N6R1 65 aa-0.56□□□□□ -2.5
CCDC66-219ENST00000484441 GDPD1Q8N9F7 314 aa-0.56□□□□□ -2.5
CCDC66-219ENST00000484441 TMEM263Q8WUH6 116 aaKnown RBP-0.56□□□□□ -2.5
CCDC66-219ENST00000484441 LINC00208Q96KT6 92 aa-0.56□□□□□ -2.5
CCDC66-219ENST00000484441 CCDC115Q96NT0 180 aa-0.56□□□□□ -2.5
CCDC66-219ENST00000484441 GPX7Q96SL4 187 aaPredicted RBP-0.56□□□□□ -2.5
CCDC66-219ENST00000484441 PHB2Q99623 299 aa-0.56□□□□□ -2.5
CCDC66-219ENST00000484441 SMIM2Q9BVW6 85 aa-0.56□□□□□ -2.5
CCDC66-219ENST00000484441 KCNQ1DNQ9H478 68 aa-0.56□□□□□ -2.5
CCDC66-219ENST00000484441 NDUFA4L2Q9NRX3 87 aa-0.56□□□□□ -2.5
CCDC66-219ENST00000484441 SCN3BQ9NY72 215 aa-0.56□□□□□ -2.5
CCDC66-219ENST00000484441 MRPL36Q9P0J6 103 aaKnown RBP-0.56□□□□□ -2.5
CCDC66-219ENST00000484441 PCTPQ9UKL6 214 aa-0.56□□□□□ -2.5
CCDC66-219ENST00000484441 HILPDAQ9Y5L2 63 aa-0.56□□□□□ -2.5
CCDC66-219ENST00000484441 MPC1Q9Y5U8 109 aa-0.56□□□□□ -2.5
CCDC66-219ENST00000484441 V9GYQ6 96 aa-0.56□□□□□ -2.5
CCDC66-219ENST00000484441 CNTLNQ9NXG0 1405 aa-0.56□□□□□ -2.5
CCDC66-219ENST00000484441 SAMD9LQ8IVG5 1584 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 TCRBV3S1A0A5B6 114 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 ARL5CA6NH57 179 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 M0R135 149 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 M0R1W7 72 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 M0R2Z0 102 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 DEGS1O15121 323 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 CST8O60676 142 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 GADD45GO95257 159 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 PPYP01298 95 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 RBP4P02753 201 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 TTRP02766 147 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 S100A8P05109 93 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 SERPINA6P08185 405 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 CST2P09228 141 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 IL7P13232 177 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 VBP1P61758 197 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 PKIAP61925 76 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 PLGLB1Q02325 96 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 RHOHQ15669 191 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 HSD17B12Q53GQ0 312 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 PSMG4Q5JS54 123 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 NCBP2-AS2Q69YL0 99 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 Q6AWC8 147 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 XAF1Q6GPH4 301 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 SPTSSBQ8NFR3 76 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 OR4K15Q8NH41 348 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 ZHX1-C8orf76Q96EF9 292 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 TCEAL4Q96EI5 215 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 ARL5BQ96KC2 179 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 AP1S3Q96PC3 154 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 AQP10Q96PS8 301 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 MGST2Q99735 147 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 WFDC6Q9BQY6 131 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 VPS25Q9BRG1 176 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 LLPHQ9BRT6 129 aaKnown RBP-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 PRADC1Q9BSG0 188 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 TCEAL2Q9H3H9 227 aaPredicted RBP-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 RNF122Q9H9V4 155 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 TPT1P8Q9HAU6 139 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 C19orf12Q9NSK7 152 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 TAS2R8Q9NYW2 309 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 VPS29Q9UBQ0 182 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 SCP2D1Q9UJQ7 156 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 CCDC141Q6ZP82 1450 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 NAIPQ13075 1403 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 CEP162Q5TB80 1403 aa-0.57□□□□□ -2.5
CCDC66-219ENST00000484441 UQCRHLA0A096LP55 91 aa-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 TRAV13-2A0A0B4J235 113 aa-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 TRAV4A0A0B4J268 109 aa-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 SPTY2D1-AS1A0A0U1RR47 76 aa-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 TRDV1A0A1B0GX56 115 aa-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 C9JAW5 83 aa-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 H0YJX3 145 aa-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 H3BUT2 72 aa-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 H7C1C5 153 aa-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 PGRMC1O00264 195 aaKnown RBP-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 MFSD11O43934 449 aa-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 NDUFB1O75438 58 aa-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 NDUFC2O95298 119 aa-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 PPP1R17O96001 155 aa-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 SERPINA1P01009 418 aa-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 CALB1P05937 261 aa-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 RPS17P08708 135 aaKnown RBP-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 FABP2P12104 132 aa-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 FCER1GP30273 86 aa-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 TMBIM6P55061 237 aa-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 ELOF1P60002 83 aaKnown RBP-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 RANP62826 216 aaKnown RBP-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 PRCDQ00LT1 54 aa-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 HIST1H1AQ02539 215 aaPredicted RBP-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 EMX2Q04743 252 aa-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 SSBP1Q04837 148 aaKnown RBP-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 FXYD3Q14802 87 aa-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 IAH1Q2TAA2 248 aaPredicted RBP-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 TMEM128Q5BJH2 165 aa-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 CLLU1Q5K131 121 aa-0.58□□□□□ -2.5
CCDC66-219ENST00000484441 C10orf128Q5T292 105 aa-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms