RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 LRP2P98164 4655 aa7.28□□□□□ -1.24
SNRNP200-206ENST00000484372 H0Y9J4 135 aa7.28□□□□□ -1.24
SNRNP200-206ENST00000484372 CXCL5P42830 114 aa7.28□□□□□ -1.24
SNRNP200-206ENST00000484372 TMA7Q9Y2S6 64 aaKnown RBP7.28□□□□□ -1.24
SNRNP200-206ENST00000484372 C20orf202A1L168 122 aa7.27□□□□□ -1.25
SNRNP200-206ENST00000484372 AKR1D1P51857 326 aa7.27□□□□□ -1.25
SNRNP200-206ENST00000484372 LBHQ53QV2 105 aaPredicted RBP7.27□□□□□ -1.25
SNRNP200-206ENST00000484372 KRTAP3-3Q9BYR6 98 aa7.27□□□□□ -1.25
SNRNP200-206ENST00000484372 KRTAP3-2Q9BYR7 98 aa7.27□□□□□ -1.25
SNRNP200-206ENST00000484372 IGLV1-50A0A075B6I6 118 aa7.26□□□□□ -1.25
SNRNP200-206ENST00000484372 C9orf129Q5T035 196 aaKnown RBP7.26□□□□□ -1.25
SNRNP200-206ENST00000484372 PRR26Q8N8Z3 221 aa7.25□□□□□ -1.25
SNRNP200-206ENST00000484372 E9PLD3 99 aa7.24□□□□□ -1.25
SNRNP200-206ENST00000484372 LEPROTO15243 131 aa7.24□□□□□ -1.25
SNRNP200-206ENST00000484372 HERVK_113P61574 105 aa7.24□□□□□ -1.25
SNRNP200-206ENST00000484372 SFTA2Q6UW10 78 aa7.24□□□□□ -1.25
SNRNP200-206ENST00000484372 KRTAP11-1Q8IUC1 163 aa7.24□□□□□ -1.25
SNRNP200-206ENST00000484372 RPL13AP40429 203 aaKnown RBP7.23□□□□□ -1.25
SNRNP200-206ENST00000484372 KRTAP7-1Q8IUC3 87 aa7.23□□□□□ -1.25
SNRNP200-206ENST00000484372 PLEKHB2Q96CS7 222 aa7.23□□□□□ -1.25
SNRNP200-206ENST00000484372 ZNF625Q96I27 306 aaPredicted RBP7.23□□□□□ -1.25
SNRNP200-206ENST00000484372 XAGE1AQ9HD64 81 aa7.23□□□□□ -1.25
SNRNP200-206ENST00000484372 C22orf24Q9Y442 160 aa7.23□□□□□ -1.25
SNRNP200-206ENST00000484372 J3QQQ9 107 aa7.22□□□□□ -1.25
SNRNP200-206ENST00000484372 ZNF861PO60384 105 aa7.22□□□□□ -1.25
SNRNP200-206ENST00000484372 TSPEAR-AS2P59090 65 aa7.21□□□□□ -1.26
SNRNP200-206ENST00000484372 ATOH7Q8N100 152 aa7.21□□□□□ -1.26
SNRNP200-206ENST00000484372 TP73-AS1Q9UF72 201 aa7.21□□□□□ -1.26
SNRNP200-206ENST00000484372 SCGB1D1O95968 90 aa7.2□□□□□ -1.26
SNRNP200-206ENST00000484372 NMUP48645 174 aa7.2□□□□□ -1.26
SNRNP200-206ENST00000484372 JOSD1Q15040 202 aaPredicted RBP7.2□□□□□ -1.26
SNRNP200-206ENST00000484372 MRPL55Q7Z7F7 128 aaKnown RBP7.2□□□□□ -1.26
SNRNP200-206ENST00000484372 NDUFA12Q9UI09 145 aa7.2□□□□□ -1.26
SNRNP200-206ENST00000484372 RNF213Q63HN8 5207 aa7.2□□□□□ -1.26
SNRNP200-206ENST00000484372 IGKV2D-26A0A0A0MRZ7 120 aa7.19□□□□□ -1.26
SNRNP200-206ENST00000484372 MYMXA0A1B0GTQ4 84 aa7.19□□□□□ -1.26
SNRNP200-206ENST00000484372 RPL28P46779 137 aaKnown RBP7.19□□□□□ -1.26
SNRNP200-206ENST00000484372 HERV-K104P63124 156 aa7.19□□□□□ -1.26
SNRNP200-206ENST00000484372 COX17Q14061 63 aa7.19□□□□□ -1.26
SNRNP200-206ENST00000484372 ANKRD39Q53RE8 183 aa7.19□□□□□ -1.26
SNRNP200-206ENST00000484372 KRTAP1-4P0C5Y4 121 aa7.18□□□□□ -1.26
SNRNP200-206ENST00000484372 LGALS3P17931 250 aaKnown RBP7.18□□□□□ -1.26
SNRNP200-206ENST00000484372 ERG28Q9UKR5 140 aa7.18□□□□□ -1.26
SNRNP200-206ENST00000484372 NKAPP1Q8N9T2 125 aa7.17□□□□□ -1.26
SNRNP200-206ENST00000484372 LINC00587B1AMM8 73 aa7.16□□□□□ -1.26
SNRNP200-206ENST00000484372 BCE1O60756 84 aa7.16□□□□□ -1.26
SNRNP200-206ENST00000484372 PYY3Q5JQD4 70 aa7.16□□□□□ -1.26
SNRNP200-206ENST00000484372 HSBP1L1C9JCN9 74 aa7.15□□□□□ -1.26
SNRNP200-206ENST00000484372 PFN2P35080 140 aa7.15□□□□□ -1.26
SNRNP200-206ENST00000484372 LINC00167Q96N53 147 aa7.14□□□□□ -1.27
SNRNP200-206ENST00000484372 TTTY13Q9BZ97 58 aa7.14□□□□□ -1.27
SNRNP200-206ENST00000484372 A0A0J9YXY3 114 aa7.13□□□□□ -1.27
SNRNP200-206ENST00000484372 GAGE10A6NGK3 116 aa7.13□□□□□ -1.27
SNRNP200-206ENST00000484372 RPL37AP8A6NKH3 93 aa7.13□□□□□ -1.27
SNRNP200-206ENST00000484372 ZNF815PA8K554 130 aa7.13□□□□□ -1.27
SNRNP200-206ENST00000484372 SMIM13P0DJ93 91 aa7.13□□□□□ -1.27
SNRNP200-206ENST00000484372 LINC00158P58513 81 aa7.13□□□□□ -1.27
SNRNP200-206ENST00000484372 PRR4Q16378 134 aa7.13□□□□□ -1.27
SNRNP200-206ENST00000484372 MEIG1Q5JSS6 88 aa7.13□□□□□ -1.27
SNRNP200-206ENST00000484372 PCP2Q8IVA1 136 aa7.13□□□□□ -1.27
SNRNP200-206ENST00000484372 IGLV5-37A0A075B6J1 123 aa7.12□□□□□ -1.27
SNRNP200-206ENST00000484372 CRYGAP11844 174 aa7.12□□□□□ -1.27
SNRNP200-206ENST00000484372 UBE2AP49459 152 aa7.12□□□□□ -1.27
SNRNP200-206ENST00000484372 SND1-IT1Q9HBX3 110 aa7.12□□□□□ -1.27
SNRNP200-206ENST00000484372 A0A0U1RRA0 63 aa7.11□□□□□ -1.27
SNRNP200-206ENST00000484372 TIMM17BO60830 172 aa7.11□□□□□ -1.27
SNRNP200-206ENST00000484372 RPL24P83731 157 aaKnown RBP7.11□□□□□ -1.27
SNRNP200-206ENST00000484372 MIR7-3HGQ8N6C7 128 aa7.11□□□□□ -1.27
SNRNP200-206ENST00000484372 LOC107984156A0A0G2JMH3 177 aa7.1□□□□□ -1.27
SNRNP200-206ENST00000484372 ARL17AQ8IVW1 177 aa7.1□□□□□ -1.27
SNRNP200-206ENST00000484372 TYMSOSQ8TAI1 123 aa7.1□□□□□ -1.27
SNRNP200-206ENST00000484372 LITAFQ99732 161 aa7.1□□□□□ -1.27
SNRNP200-206ENST00000484372 VAMP8Q9BV40 100 aa7.1□□□□□ -1.27
SNRNP200-206ENST00000484372 COX8AP10176 69 aa7.09□□□□□ -1.27
SNRNP200-206ENST00000484372 ADAMTSL4-AS1Q5T5F5 129 aa7.09□□□□□ -1.27
SNRNP200-206ENST00000484372 BOD1L2Q8IYS8 172 aa7.09□□□□□ -1.27
SNRNP200-206ENST00000484372 PAM16Q9Y3D7 125 aa7.09□□□□□ -1.27
SNRNP200-206ENST00000484372 LPAP08519 4548 aa7.09□□□□□ -1.28
SNRNP200-206ENST00000484372 IGKV2-28A0A075B6P5 120 aa7.08□□□□□ -1.28
SNRNP200-206ENST00000484372 LOC105371267A0A1B0GV96 52 aa7.08□□□□□ -1.28
SNRNP200-206ENST00000484372 DLEU1O43261 78 aa7.08□□□□□ -1.28
SNRNP200-206ENST00000484372 TSPAN13O95857 204 aa7.08□□□□□ -1.28
SNRNP200-206ENST00000484372 IGKV2D-28P01615 120 aa7.08□□□□□ -1.28
SNRNP200-206ENST00000484372 SPATA45Q537H7 98 aa7.08□□□□□ -1.28
SNRNP200-206ENST00000484372 SCGB1D4Q6XE38 83 aa7.07□□□□□ -1.28
SNRNP200-206ENST00000484372 DAND5Q8N907 189 aa7.07□□□□□ -1.28
SNRNP200-206ENST00000484372 A0A087X002 238 aa7.06□□□□□ -1.28
SNRNP200-206ENST00000484372 TMEM238C9JI98 176 aa7.05□□□□□ -1.28
SNRNP200-206ENST00000484372 VPREB1P12018 145 aa7.05□□□□□ -1.28
SNRNP200-206ENST00000484372 FAM229BQ4G0N7 80 aa7.05□□□□□ -1.28
SNRNP200-206ENST00000484372 Q6ZVH6 145 aa7.05□□□□□ -1.28
SNRNP200-206ENST00000484372 FAM19A1Q7Z5A9 133 aa7.05□□□□□ -1.28
SNRNP200-206ENST00000484372 Q8NDZ9 215 aa7.05□□□□□ -1.28
SNRNP200-206ENST00000484372 C14orf144Q96I85 54 aa7.05□□□□□ -1.28
SNRNP200-206ENST00000484372 SPANXDQ9BXN6 97 aa7.05□□□□□ -1.28
SNRNP200-206ENST00000484372 SPANXCQ9NY87 97 aa7.05□□□□□ -1.28
SNRNP200-206ENST00000484372 EIF4EBP3O60516 100 aaPredicted RBP7.04□□□□□ -1.28
SNRNP200-206ENST00000484372 SOSTDC1Q6X4U4 206 aa7.04□□□□□ -1.28
SNRNP200-206ENST00000484372 KRTAP13-1Q8IUC0 172 aa7.04□□□□□ -1.28
SNRNP200-206ENST00000484372 LINC00308Q8TCZ7 52 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms