RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 VPS13DQ5THJ4 4388 aa-0.29□□□□□ -2.46
SCAF11-207ENST00000484275 ACACBO00763 2458 aa-0.29□□□□□ -2.46
SCAF11-207ENST00000484275 CCDC141Q6ZP82 1450 aa-0.29□□□□□ -2.46
SCAF11-207ENST00000484275 TRIOO75962 3097 aa-0.29□□□□□ -2.46
SCAF11-207ENST00000484275 CFAP46Q8IYW2 2715 aa-0.29□□□□□ -2.46
SCAF11-207ENST00000484275 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.29□□□□□ -2.46
SCAF11-207ENST00000484275 KNDC1Q76NI1 1749 aa-0.3□□□□□ -2.46
SCAF11-207ENST00000484275 COL4A6Q14031 1691 aa-0.3□□□□□ -2.46
SCAF11-207ENST00000484275 LINC00959A0A1B0GUT2 108 aa-0.3□□□□□ -2.46
SCAF11-207ENST00000484275 NAP1L6A6NFF2 107 aa-0.3□□□□□ -2.46
SCAF11-207ENST00000484275 UBE2D3P61077 147 aa-0.3□□□□□ -2.46
SCAF11-207ENST00000484275 GNG11P61952 73 aa-0.3□□□□□ -2.46
SCAF11-207ENST00000484275 UBE2D2P62837 147 aa-0.3□□□□□ -2.46
SCAF11-207ENST00000484275 UBA52P62987 128 aaKnown RBP-0.3□□□□□ -2.46
SCAF11-207ENST00000484275 Q0VG73 95 aa-0.3□□□□□ -2.46
SCAF11-207ENST00000484275 RPL13AP3Q6NVV1 102 aa-0.3□□□□□ -2.46
SCAF11-207ENST00000484275 USMG5Q96IX5 58 aa-0.3□□□□□ -2.46
SCAF11-207ENST00000484275 LINC01600Q96MT4 127 aa-0.3□□□□□ -2.46
SCAF11-207ENST00000484275 FXYD6Q9H0Q3 95 aa-0.3□□□□□ -2.46
SCAF11-207ENST00000484275 ARL2-SNX15V9GYD0 113 aa-0.3□□□□□ -2.46
SCAF11-207ENST00000484275 FAM186AA6NE01 2351 aa-0.3□□□□□ -2.46
SCAF11-207ENST00000484275 PLEKHH2Q8IVE3 1493 aa-0.3□□□□□ -2.46
SCAF11-207ENST00000484275 BOD1L1Q8NFC6 3051 aa-0.3□□□□□ -2.46
SCAF11-207ENST00000484275 PKD1L3Q7Z443 1732 aa-0.3□□□□□ -2.46
SCAF11-207ENST00000484275 DYNC1H1Q14204 4646 aaKnown RBP-0.3□□□□□ -2.46
SCAF11-207ENST00000484275 DNAH6Q9C0G6 4158 aa-0.31□□□□□ -2.46
SCAF11-207ENST00000484275 CNOT1A5YKK6 2376 aaKnown RBP-0.31□□□□□ -2.46
SCAF11-207ENST00000484275 APOBP04114 4563 aaKnown RBP-0.31□□□□□ -2.46
SCAF11-207ENST00000484275 CFAP54Q96N23 3096 aa-0.31□□□□□ -2.46
SCAF11-207ENST00000484275 PCNX1Q96RV3 2341 aa-0.31□□□□□ -2.46
SCAF11-207ENST00000484275 KALRNO60229 2985 aa-0.31□□□□□ -2.46
SCAF11-207ENST00000484275 DNAH5Q8TE73 4624 aa-0.31□□□□□ -2.46
SCAF11-207ENST00000484275 BCORQ6W2J9 1755 aa-0.31□□□□□ -2.46
SCAF11-207ENST00000484275 EFCAB10A6NFE3 127 aa-0.31□□□□□ -2.46
SCAF11-207ENST00000484275 SYS1-DBNDD2H3BUS1 97 aa-0.31□□□□□ -2.46
SCAF11-207ENST00000484275 SNAPC5O75971 98 aa-0.31□□□□□ -2.46
SCAF11-207ENST00000484275 COX8AP10176 69 aa-0.31□□□□□ -2.46
SCAF11-207ENST00000484275 GNG4P50150 75 aa-0.31□□□□□ -2.46
SCAF11-207ENST00000484275 DPH3P1Q9H4G8 78 aa-0.31□□□□□ -2.46
SCAF11-207ENST00000484275 IER3IP1Q9Y5U9 82 aa-0.31□□□□□ -2.46
SCAF11-207ENST00000484275 MUC3AQ02505 3323 aa-0.31□□□□□ -2.46
SCAF11-207ENST00000484275 PZPP20742 1482 aa-0.31□□□□□ -2.46
SCAF11-207ENST00000484275 NLRP1Q9C000 1473 aa-0.31□□□□□ -2.46
SCAF11-207ENST00000484275 EDC4Q6P2E9 1401 aaKnown RBP-0.31□□□□□ -2.46
SCAF11-207ENST00000484275 EP400Q96L91 3159 aa-0.31□□□□□ -2.46
SCAF11-207ENST00000484275 UTP20O75691 2785 aaKnown RBP-0.32□□□□□ -2.46
SCAF11-207ENST00000484275 VCANP13611 3396 aa-0.32□□□□□ -2.46
SCAF11-207ENST00000484275 QSER1Q2KHR3 1735 aa-0.32□□□□□ -2.46
SCAF11-207ENST00000484275 CENPEQ02224 2701 aa-0.32□□□□□ -2.46
SCAF11-207ENST00000484275 M0R2T5 61 aa-0.32□□□□□ -2.46
SCAF11-207ENST00000484275 DLEU1O43261 78 aa-0.32□□□□□ -2.46
SCAF11-207ENST00000484275 TRAPPC2P0DI81 140 aa-0.32□□□□□ -2.46
SCAF11-207ENST00000484275 TRAPPC2BP0DI82 140 aa-0.32□□□□□ -2.46
SCAF11-207ENST00000484275 KRTAP19-6Q3LI70 58 aa-0.32□□□□□ -2.46
SCAF11-207ENST00000484275 KRTAP19-7Q3SYF9 63 aa-0.32□□□□□ -2.46
SCAF11-207ENST00000484275 SVBPQ8N300 66 aa-0.32□□□□□ -2.46
SCAF11-207ENST00000484275 FDCSPQ8NFU4 85 aa-0.32□□□□□ -2.46
SCAF11-207ENST00000484275 DEFB105AQ8NG35 78 aa-0.32□□□□□ -2.46
SCAF11-207ENST00000484275 MANBALQ9NQG1 85 aa-0.32□□□□□ -2.46
SCAF11-207ENST00000484275 PRO1854Q9UHT4 67 aa-0.32□□□□□ -2.46
SCAF11-207ENST00000484275 EYSQ5T1H1 3165 aa-0.32□□□□□ -2.46
SCAF11-207ENST00000484275 CRYBG3Q68DQ2 2970 aa-0.32□□□□□ -2.46
SCAF11-207ENST00000484275 DNAH17Q9UFH2 4485 aa-0.32□□□□□ -2.46
SCAF11-207ENST00000484275 CRYBG1Q9Y4K1 1723 aa-0.33□□□□□ -2.46
SCAF11-207ENST00000484275 ZZEF1O43149 2961 aa-0.33□□□□□ -2.46
SCAF11-207ENST00000484275 HTTP42858 3142 aa-0.33□□□□□ -2.46
SCAF11-207ENST00000484275 CLTCQ00610 1675 aaKnown RBP-0.33□□□□□ -2.46
SCAF11-207ENST00000484275 AKAP9Q99996 3911 aa-0.33□□□□□ -2.46
SCAF11-207ENST00000484275 LRBAP50851 2863 aa-0.33□□□□□ -2.46
SCAF11-207ENST00000484275 A0A1B0GWA3 101 aa-0.33□□□□□ -2.46
SCAF11-207ENST00000484275 FAM223BA6NKX1 122 aa-0.33□□□□□ -2.46
SCAF11-207ENST00000484275 SAA2P0DJI9 122 aaPredicted RBP-0.33□□□□□ -2.46
SCAF11-207ENST00000484275 PPP3R1P63098 170 aa-0.33□□□□□ -2.46
SCAF11-207ENST00000484275 C12orf57Q99622 126 aa-0.33□□□□□ -2.46
SCAF11-207ENST00000484275 SPEGQ15772 3267 aa-0.33□□□□□ -2.46
SCAF11-207ENST00000484275 DMDP11532 3685 aa-0.33□□□□□ -2.46
SCAF11-207ENST00000484275 RELNP78509 3460 aa-0.33□□□□□ -2.46
SCAF11-207ENST00000484275 REV3LO60673 3130 aa-0.33□□□□□ -2.46
SCAF11-207ENST00000484275 WDFY3Q8IZQ1 3526 aa-0.34□□□□□ -2.46
SCAF11-207ENST00000484275 MGAQ8IWI9 3026 aa-0.34□□□□□ -2.46
SCAF11-207ENST00000484275 C5orf42Q9H799 3197 aa-0.34□□□□□ -2.46
SCAF11-207ENST00000484275 MYH4Q9Y623 1939 aa-0.34□□□□□ -2.46
SCAF11-207ENST00000484275 DNAH8Q96JB1 4490 aa-0.34□□□□□ -2.46
SCAF11-207ENST00000484275 H3BQ15 152 aa-0.34□□□□□ -2.46
SCAF11-207ENST00000484275 LINC00846Q9NV44 126 aa-0.34□□□□□ -2.46
SCAF11-207ENST00000484275 PCNTO95613 3336 aa-0.34□□□□□ -2.46
SCAF11-207ENST00000484275 SZT2Q5T011 3432 aa-0.34□□□□□ -2.46
SCAF11-207ENST00000484275 CUX1P39880 1505 aa-0.34□□□□□ -2.46
SCAF11-207ENST00000484275 ZFYVE16Q7Z3T8 1539 aa-0.34□□□□□ -2.46
SCAF11-207ENST00000484275 DNAH9Q9NYC9 4486 aa-0.34□□□□□ -2.46
SCAF11-207ENST00000484275 NKTRP30414 1462 aaKnown RBP-0.35□□□□□ -2.46
SCAF11-207ENST00000484275 TIAM2Q8IVF5 1701 aa-0.35□□□□□ -2.47
SCAF11-207ENST00000484275 LOC400499M0QZD8 3231 aa-0.35□□□□□ -2.47
SCAF11-207ENST00000484275 PEG3Q9GZU2 1588 aa-0.35□□□□□ -2.47
SCAF11-207ENST00000484275 FREM2Q5SZK8 3169 aa-0.35□□□□□ -2.47
SCAF11-207ENST00000484275 A0A1B0GV90 55 aa-0.35□□□□□ -2.47
SCAF11-207ENST00000484275 CRYM-AS1A6NIL9 109 aa-0.35□□□□□ -2.47
SCAF11-207ENST00000484275 CORTO00230 105 aa-0.35□□□□□ -2.47
SCAF11-207ENST00000484275 KRTDAPP60985 99 aa-0.35□□□□□ -2.47
SCAF11-207ENST00000484275 SEC11AP67812 179 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms