RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 ZNF22P17026 224 aaPredicted RBP11.54□□□□□ -0.56
NDUFA3-213ENST00000484103 KRTDAPP60985 99 aa11.54□□□□□ -0.56
NDUFA3-213ENST00000484103 COX7B2Q8TF08 81 aa11.54□□□□□ -0.56
NDUFA3-213ENST00000484103 GAGE10A6NGK3 116 aa11.53□□□□□ -0.56
NDUFA3-213ENST00000484103 RPL37AP8A6NKH3 93 aa11.52□□□□□ -0.57
NDUFA3-213ENST00000484103 LBHQ53QV2 105 aaPredicted RBP11.52□□□□□ -0.57
NDUFA3-213ENST00000484103 IGLV1-50A0A075B6I6 118 aa11.51□□□□□ -0.57
NDUFA3-213ENST00000484103 PLNP26678 52 aa11.51□□□□□ -0.57
NDUFA3-213ENST00000484103 CXCL5P42830 114 aa11.51□□□□□ -0.57
NDUFA3-213ENST00000484103 MRPL55Q7Z7F7 128 aaKnown RBP11.51□□□□□ -0.57
NDUFA3-213ENST00000484103 PMCHL2Q9BQD1 86 aa11.51□□□□□ -0.57
NDUFA3-213ENST00000484103 ZNF861PO60384 105 aa11.5□□□□□ -0.57
NDUFA3-213ENST00000484103 DPM2O94777 84 aa11.5□□□□□ -0.57
NDUFA3-213ENST00000484103 H3BRM9 83 aa11.49□□□□□ -0.57
NDUFA3-213ENST00000484103 IGKCP01834 107 aa11.49□□□□□ -0.57
NDUFA3-213ENST00000484103 TMEM170BQ5T4T1 132 aa11.48□□□□□ -0.57
NDUFA3-213ENST00000484103 IGLV5-39A0A0G2JS06 123 aa11.47□□□□□ -0.57
NDUFA3-213ENST00000484103 TMEM223A0PJW6 202 aa11.47□□□□□ -0.57
NDUFA3-213ENST00000484103 C20orf202A1L168 122 aa11.47□□□□□ -0.57
NDUFA3-213ENST00000484103 PRR4Q16378 134 aa11.46□□□□□ -0.57
NDUFA3-213ENST00000484103 LINC00167Q96N53 147 aa11.46□□□□□ -0.57
NDUFA3-213ENST00000484103 TSPAN13O95857 204 aa11.45□□□□□ -0.58
NDUFA3-213ENST00000484103 PFN2P35080 140 aa11.45□□□□□ -0.58
NDUFA3-213ENST00000484103 BCE1O60756 84 aa11.44□□□□□ -0.58
NDUFA3-213ENST00000484103 RPL13AP40429 203 aaKnown RBP11.44□□□□□ -0.58
NDUFA3-213ENST00000484103 AKR1D1P51857 326 aa11.43□□□□□ -0.58
NDUFA3-213ENST00000484103 NKAPP1Q8N9T2 125 aa11.43□□□□□ -0.58
NDUFA3-213ENST00000484103 ANAPC11Q9NYG5 84 aa11.43□□□□□ -0.58
NDUFA3-213ENST00000484103 TP73-AS1Q9UF72 201 aa11.43□□□□□ -0.58
NDUFA3-213ENST00000484103 RPL28P46779 137 aaKnown RBP11.42□□□□□ -0.58
NDUFA3-213ENST00000484103 IGKV2-28A0A075B6P5 120 aa11.41□□□□□ -0.58
NDUFA3-213ENST00000484103 IGKV2D-28P01615 120 aa11.41□□□□□ -0.58
NDUFA3-213ENST00000484103 ZNF625Q96I27 306 aaPredicted RBP11.41□□□□□ -0.58
NDUFA3-213ENST00000484103 A0A087X002 238 aa11.4□□□□□ -0.58
NDUFA3-213ENST00000484103 UBE2AP49459 152 aa11.4□□□□□ -0.58
NDUFA3-213ENST00000484103 HERVK_113P61574 105 aa11.39□□□□□ -0.59
NDUFA3-213ENST00000484103 JOSD1Q15040 202 aaPredicted RBP11.38□□□□□ -0.59
NDUFA3-213ENST00000484103 ATOH7Q8N100 152 aa11.38□□□□□ -0.59
NDUFA3-213ENST00000484103 E9PLD3 99 aa11.37□□□□□ -0.59
NDUFA3-213ENST00000484103 LEPROTO15243 131 aa11.36□□□□□ -0.59
NDUFA3-213ENST00000484103 SCGB1D1O95968 90 aa11.36□□□□□ -0.59
NDUFA3-213ENST00000484103 TSPEAR-AS2P59090 65 aa11.36□□□□□ -0.59
NDUFA3-213ENST00000484103 TYMSOSQ8TAI1 123 aa11.36□□□□□ -0.59
NDUFA3-213ENST00000484103 PLEKHB2Q96CS7 222 aa11.35□□□□□ -0.59
NDUFA3-213ENST00000484103 ERG28Q9UKR5 140 aa11.35□□□□□ -0.59
NDUFA3-213ENST00000484103 IGLV5-37A0A075B6J1 123 aa11.34□□□□□ -0.59
NDUFA3-213ENST00000484103 CRYGAP11844 174 aa11.34□□□□□ -0.59
NDUFA3-213ENST00000484103 PRLHP81277 87 aa11.34□□□□□ -0.59
NDUFA3-213ENST00000484103 SND1-IT1Q9HBX3 110 aa11.34□□□□□ -0.59
NDUFA3-213ENST00000484103 TMEM238C9JI98 176 aa11.33□□□□□ -0.6
NDUFA3-213ENST00000484103 ANKRD39Q53RE8 183 aa11.33□□□□□ -0.6
NDUFA3-213ENST00000484103 PYY3Q5JQD4 70 aa11.33□□□□□ -0.6
NDUFA3-213ENST00000484103 IGKV2D-26A0A0A0MRZ7 120 aa11.32□□□□□ -0.6
NDUFA3-213ENST00000484103 J3QQQ9 107 aa11.32□□□□□ -0.6
NDUFA3-213ENST00000484103 SFTA2Q6UW10 78 aa11.32□□□□□ -0.6
NDUFA3-213ENST00000484103 A0A0U1RRA0 63 aa11.31□□□□□ -0.6
NDUFA3-213ENST00000484103 FAM19A1Q7Z5A9 133 aa11.31□□□□□ -0.6
NDUFA3-213ENST00000484103 LOC105371267A0A1B0GV96 52 aa11.3□□□□□ -0.6
NDUFA3-213ENST00000484103 VPREB1P12018 145 aa11.3□□□□□ -0.6
NDUFA3-213ENST00000484103 Q8NDZ9 215 aa11.3□□□□□ -0.6
NDUFA3-213ENST00000484103 LGALS3P17931 250 aaKnown RBP11.29□□□□□ -0.6
NDUFA3-213ENST00000484103 NMUP48645 174 aa11.29□□□□□ -0.6
NDUFA3-213ENST00000484103 KRTAP13-1Q8IUC0 172 aa11.29□□□□□ -0.6
NDUFA3-213ENST00000484103 NDUFA12Q9UI09 145 aa11.29□□□□□ -0.6
NDUFA3-213ENST00000484103 LINC00158P58513 81 aa11.28□□□□□ -0.6
NDUFA3-213ENST00000484103 KRTAP13-2Q52LG2 175 aa11.28□□□□□ -0.6
NDUFA3-213ENST00000484103 HSBP1L1C9JCN9 74 aa11.27□□□□□ -0.61
NDUFA3-213ENST00000484103 RETNLBQ9BQ08 111 aa11.27□□□□□ -0.61
NDUFA3-213ENST00000484103 TMEM126AQ9H061 195 aa11.27□□□□□ -0.61
NDUFA3-213ENST00000484103 MYMXA0A1B0GTQ4 84 aa11.26□□□□□ -0.61
NDUFA3-213ENST00000484103 HERV-K104P63124 156 aa11.26□□□□□ -0.61
NDUFA3-213ENST00000484103 RPL24P83731 157 aaKnown RBP11.26□□□□□ -0.61
NDUFA3-213ENST00000484103 COX17Q14061 63 aa11.24□□□□□ -0.61
NDUFA3-213ENST00000484103 TTTY13Q9BZ97 58 aa11.24□□□□□ -0.61
NDUFA3-213ENST00000484103 M0R378 163 aa11.23□□□□□ -0.61
NDUFA3-213ENST00000484103 VAMP8Q9BV40 100 aa11.23□□□□□ -0.61
NDUFA3-213ENST00000484103 PCP2Q8IVA1 136 aa11.22□□□□□ -0.61
NDUFA3-213ENST00000484103 HIGD2AQ9BW72 106 aa11.22□□□□□ -0.61
NDUFA3-213ENST00000484103 MUC2Q02817 5179 aa11.22□□□□□ -0.61
NDUFA3-213ENST00000484103 ZNF815PA8K554 130 aa11.21□□□□□ -0.61
NDUFA3-213ENST00000484103 LINC00304Q8N9R0 145 aa11.21□□□□□ -0.61
NDUFA3-213ENST00000484103 PAM16Q9Y3D7 125 aa11.21□□□□□ -0.61
NDUFA3-213ENST00000484103 A0A0J9YXY3 114 aa11.2□□□□□ -0.62
NDUFA3-213ENST00000484103 SPATA45Q537H7 98 aa11.2□□□□□ -0.62
NDUFA3-213ENST00000484103 SMIM6P0DI80 62 aa11.19□□□□□ -0.62
NDUFA3-213ENST00000484103 SMIM13P0DJ93 91 aa11.19□□□□□ -0.62
NDUFA3-213ENST00000484103 MEIG1Q5JSS6 88 aa11.19□□□□□ -0.62
NDUFA3-213ENST00000484103 LINC00587B1AMM8 73 aa11.18□□□□□ -0.62
NDUFA3-213ENST00000484103 NCR3O14931 201 aa11.18□□□□□ -0.62
NDUFA3-213ENST00000484103 FAM229BQ4G0N7 80 aa11.18□□□□□ -0.62
NDUFA3-213ENST00000484103 C3orf22Q8N5N4 141 aa11.18□□□□□ -0.62
NDUFA3-213ENST00000484103 COX8AP10176 69 aa11.17□□□□□ -0.62
NDUFA3-213ENST00000484103 BOD1L2Q8IYS8 172 aa11.16□□□□□ -0.62
NDUFA3-213ENST00000484103 LITAFQ99732 161 aa11.16□□□□□ -0.62
NDUFA3-213ENST00000484103 DLEU1O43261 78 aa11.15□□□□□ -0.62
NDUFA3-213ENST00000484103 TIMM17BO60830 172 aa11.15□□□□□ -0.62
NDUFA3-213ENST00000484103 MIR7-3HGQ8N6C7 128 aa11.14□□□□□ -0.63
NDUFA3-213ENST00000484103 S100A12P80511 92 aa11.12□□□□□ -0.63
NDUFA3-213ENST00000484103 ADAMTSL4-AS1Q5T5F5 129 aa11.12□□□□□ -0.63
NDUFA3-213ENST00000484103 SCGB1D4Q6XE38 83 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms