RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, human

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTFDC1-208	ENST00000484084	ERAS	Q7Z444	233 aa		4.69	□□□□□ -1.66
RTFDC1-208	ENST00000484084	SMCR5	Q8TEV8	140 aa		4.69	□□□□□ -1.66
RTFDC1-208	ENST00000484084	LINC01546	A6NGU7	62 aa		4.68	□□□□□ -1.66
RTFDC1-208	ENST00000484084	RAB14	P61106	215 aa		4.68	□□□□□ -1.66
RTFDC1-208	ENST00000484084	PCOTH	Q58A44	107 aa		4.68	□□□□□ -1.66
RTFDC1-208	ENST00000484084	C4orf48	Q5BLP8	95 aa		4.68	□□□□□ -1.66
RTFDC1-208	ENST00000484084	ERG28	Q9UKR5	140 aa		4.68	□□□□□ -1.66
RTFDC1-208	ENST00000484084	MACF1	Q9UPN3	7388 aa	Known RBP	4.67	□□□□□ -1.66
RTFDC1-208	ENST00000484084	ATP5L	O75964	103 aa		4.67	□□□□□ -1.66
RTFDC1-208	ENST00000484084	PAPPA-AS1	Q5QFB9	102 aa		4.67	□□□□□ -1.66
RTFDC1-208	ENST00000484084	NXT2	Q9NPJ8	142 aa	Known RBP	4.67	□□□□□ -1.66
RTFDC1-208	ENST00000484084	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.67	□□□□□ -1.66
RTFDC1-208	ENST00000484084	ERC2-IT1	O76042	136 aa		4.66	□□□□□ -1.66
RTFDC1-208	ENST00000484084	RPL24	P83731	157 aa	Known RBP	4.66	□□□□□ -1.66
RTFDC1-208	ENST00000484084	SCGB3A1	Q96QR1	104 aa		4.66	□□□□□ -1.66
RTFDC1-208	ENST00000484084	IGLV8-61	A0A075B6I0	122 aa		4.65	□□□□□ -1.67
RTFDC1-208	ENST00000484084	SLC25A20	O43772	301 aa		4.65	□□□□□ -1.67
RTFDC1-208	ENST00000484084	COX17	Q14061	63 aa		4.65	□□□□□ -1.67
RTFDC1-208	ENST00000484084	ZNF625	Q96I27	306 aa	Predicted RBP	4.65	□□□□□ -1.67
RTFDC1-208	ENST00000484084	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.65	□□□□□ -1.67
RTFDC1-208	ENST00000484084	IGLC3	P0DOY3	106 aa		4.64	□□□□□ -1.67
RTFDC1-208	ENST00000484084	ZNF22	P17026	224 aa	Predicted RBP	4.64	□□□□□ -1.67
RTFDC1-208	ENST00000484084	MOBP	Q13875	183 aa		4.64	□□□□□ -1.67
RTFDC1-208	ENST00000484084	PMVK	Q15126	192 aa		4.64	□□□□□ -1.67
RTFDC1-208	ENST00000484084	MRPL18	Q9H0U6	180 aa	Known RBP	4.64	□□□□□ -1.67
RTFDC1-208	ENST00000484084	KCNQ1DN	Q9H478	68 aa		4.64	□□□□□ -1.67
RTFDC1-208	ENST00000484084		A0A096LNJ9	63 aa		4.63	□□□□□ -1.67
RTFDC1-208	ENST00000484084		A0A1B0GVG6	124 aa		4.63	□□□□□ -1.67
RTFDC1-208	ENST00000484084	PEA15	Q15121	130 aa		4.63	□□□□□ -1.67
RTFDC1-208	ENST00000484084	KIAA1644	Q3SXP7	199 aa		4.63	□□□□□ -1.67
RTFDC1-208	ENST00000484084	SSBP3-AS1	Q7Z2R9	100 aa		4.63	□□□□□ -1.67
RTFDC1-208	ENST00000484084	IGLV9-49	A0A0B4J1Y8	123 aa		4.62	□□□□□ -1.67
RTFDC1-208	ENST00000484084	G0S2	P27469	103 aa		4.62	□□□□□ -1.67
RTFDC1-208	ENST00000484084	GAGE2A	Q6NT46	116 aa		4.62	□□□□□ -1.67
RTFDC1-208	ENST00000484084	AKAP14	Q86UN6	197 aa		4.62	□□□□□ -1.67
RTFDC1-208	ENST00000484084	FAM19A2	Q8N3H0	131 aa		4.62	□□□□□ -1.67
RTFDC1-208	ENST00000484084		Q9BRP9	147 aa		4.62	□□□□□ -1.67
RTFDC1-208	ENST00000484084	NDUFA12	Q9UI09	145 aa		4.62	□□□□□ -1.67
RTFDC1-208	ENST00000484084		B5MCH6	92 aa		4.61	□□□□□ -1.67
RTFDC1-208	ENST00000484084	PRY	O14603	147 aa		4.61	□□□□□ -1.67
RTFDC1-208	ENST00000484084		H3BRM9	83 aa		4.6	□□□□□ -1.67
RTFDC1-208	ENST00000484084	TRBV10-3	A0A0K0K1G6	114 aa		4.59	□□□□□ -1.67
RTFDC1-208	ENST00000484084	ANAPC16	Q96DE5	110 aa		4.59	□□□□□ -1.67
RTFDC1-208	ENST00000484084	URB1-AS1	Q96HZ7	61 aa		4.59	□□□□□ -1.67
RTFDC1-208	ENST00000484084		A0A0U1RRA0	63 aa		4.58	□□□□□ -1.68
RTFDC1-208	ENST00000484084	C9orf92	A6NGG3	77 aa		4.58	□□□□□ -1.68
RTFDC1-208	ENST00000484084	C11orf86	A6NJI1	115 aa		4.58	□□□□□ -1.68
RTFDC1-208	ENST00000484084		M0R2T5	61 aa		4.58	□□□□□ -1.68
RTFDC1-208	ENST00000484084	NCR3	O14931	201 aa		4.58	□□□□□ -1.68
RTFDC1-208	ENST00000484084	KRTAP9-8	Q9BYQ0	159 aa		4.58	□□□□□ -1.68
RTFDC1-208	ENST00000484084	LINC00158	P58513	81 aa		4.57	□□□□□ -1.68
RTFDC1-208	ENST00000484084	hCG_2014768	A0A024R1R8	64 aa		4.56	□□□□□ -1.68
RTFDC1-208	ENST00000484084	ETDC	A0A1B0GVM5	59 aa		4.56	□□□□□ -1.68
RTFDC1-208	ENST00000484084	LINC01549	A6NIU2	74 aa		4.56	□□□□□ -1.68
RTFDC1-208	ENST00000484084	MT-ND4L	P03901	98 aa		4.56	□□□□□ -1.68
RTFDC1-208	ENST00000484084	SMIM13	P0DJ93	91 aa		4.56	□□□□□ -1.68
RTFDC1-208	ENST00000484084	BOD1L2	Q8IYS8	172 aa		4.56	□□□□□ -1.68
RTFDC1-208	ENST00000484084		Q6ZRX8	168 aa		4.55	□□□□□ -1.68
RTFDC1-208	ENST00000484084	ST20-AS1	Q8NBB2	130 aa		4.55	□□□□□ -1.68
RTFDC1-208	ENST00000484084	LOC107984156	A0A0G2JMH3	177 aa		4.54	□□□□□ -1.68
RTFDC1-208	ENST00000484084	TMEM223	A0PJW6	202 aa		4.54	□□□□□ -1.68
RTFDC1-208	ENST00000484084	SFTA2	Q6UW10	78 aa		4.54	□□□□□ -1.68
RTFDC1-208	ENST00000484084	ARL17A	Q8IVW1	177 aa		4.54	□□□□□ -1.68
RTFDC1-208	ENST00000484084	MIR7-3HG	Q8N6C7	128 aa		4.54	□□□□□ -1.68
RTFDC1-208	ENST00000484084	NDUFA6	P56556	154 aa		4.53	□□□□□ -1.68
RTFDC1-208	ENST00000484084	RPL37	P61927	97 aa	Known RBP	4.53	□□□□□ -1.68
RTFDC1-208	ENST00000484084	TRAV9-1	A0A075B6T8	112 aa		4.52	□□□□□ -1.69
RTFDC1-208	ENST00000484084	IGLV6-57	P01721	117 aa		4.52	□□□□□ -1.69
RTFDC1-208	ENST00000484084	PMCHL1	Q16048	86 aa		4.52	□□□□□ -1.69
RTFDC1-208	ENST00000484084	TMEM170B	Q5T4T1	132 aa		4.52	□□□□□ -1.69
RTFDC1-208	ENST00000484084	C9orf153	Q5TBE3	101 aa		4.51	□□□□□ -1.69
RTFDC1-208	ENST00000484084	BAGE3	Q86Y29	109 aa		4.51	□□□□□ -1.69
RTFDC1-208	ENST00000484084	KRTAP19-1	Q8IUB9	90 aa		4.51	□□□□□ -1.69
RTFDC1-208	ENST00000484084	LCE2B	O14633	110 aa		4.5	□□□□□ -1.69
RTFDC1-208	ENST00000484084	EIF4EBP3	O60516	100 aa	Predicted RBP	4.5	□□□□□ -1.69
RTFDC1-208	ENST00000484084	SPRR1B	P22528	89 aa		4.5	□□□□□ -1.69
RTFDC1-208	ENST00000484084	DDT	P30046	118 aa		4.5	□□□□□ -1.69
RTFDC1-208	ENST00000484084	HRCT1	Q6UXD1	115 aa		4.5	□□□□□ -1.69
RTFDC1-208	ENST00000484084	FA2H	Q7L5A8	372 aa		4.5	□□□□□ -1.69
RTFDC1-208	ENST00000484084	TRBV10-2	A0A0K0K1G8	114 aa		4.49	□□□□□ -1.69
RTFDC1-208	ENST00000484084	TSPEAR-AS2	P59090	65 aa		4.49	□□□□□ -1.69
RTFDC1-208	ENST00000484084	COX6B2	Q6YFQ2	88 aa		4.49	□□□□□ -1.69
RTFDC1-208	ENST00000484084	C18orf32	Q8TCD1	76 aa		4.49	□□□□□ -1.69
RTFDC1-208	ENST00000484084	HBD	P02042	147 aa		4.48	□□□□□ -1.69
RTFDC1-208	ENST00000484084	LINC00614	P0C842	121 aa		4.48	□□□□□ -1.69
RTFDC1-208	ENST00000484084	C1orf195	Q5TG92	126 aa		4.48	□□□□□ -1.69
RTFDC1-208	ENST00000484084	SMCO4	Q9NRQ5	59 aa		4.48	□□□□□ -1.69
RTFDC1-208	ENST00000484084	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.48	□□□□□ -1.69
RTFDC1-208	ENST00000484084	MEIG1	Q5JSS6	88 aa		4.47	□□□□□ -1.69
RTFDC1-208	ENST00000484084		Q5XG85	94 aa		4.47	□□□□□ -1.69
RTFDC1-208	ENST00000484084	LIMD2	Q9BT23	127 aa		4.47	□□□□□ -1.69
RTFDC1-208	ENST00000484084	RPS10P5	Q9NQ39	176 aa		4.47	□□□□□ -1.69
RTFDC1-208	ENST00000484084	C5orf52	A6NGY3	159 aa		4.46	□□□□□ -1.7
RTFDC1-208	ENST00000484084	HERV-K104	P63124	156 aa		4.46	□□□□□ -1.7
RTFDC1-208	ENST00000484084	FABP9	Q0Z7S8	132 aa		4.46	□□□□□ -1.7
RTFDC1-208	ENST00000484084	SOSTDC1	Q6X4U4	206 aa		4.46	□□□□□ -1.7
RTFDC1-208	ENST00000484084	TRAV23DV6	A0A075B6W5	121 aa		4.45	□□□□□ -1.7
RTFDC1-208	ENST00000484084	TRAV12-1	A0A0B4J245	112 aa		4.45	□□□□□ -1.7
RTFDC1-208	ENST00000484084		A0A0G2JQZ4	141 aa		4.45	□□□□□ -1.7
RTFDC1-208	ENST00000484084		H7C2G1	150 aa		4.45	□□□□□ -1.7

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms