RNA–Protein interactions for RNA: ENST00000483938.1

LPP-215, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 368 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-215ENST00000483938 GVINP1Q7Z2Y8 2422 aa0.37□□□□□ -2.35
LPP-215ENST00000483938 NKTRP30414 1462 aaKnown RBP0.37□□□□□ -2.35
LPP-215ENST00000483938 NCOA2Q15596 1464 aa0.37□□□□□ -2.35
LPP-215ENST00000483938 SPTBN1Q01082 2364 aaKnown RBP0.37□□□□□ -2.35
LPP-215ENST00000483938 KIF20BQ96Q89 1820 aa0.37□□□□□ -2.35
LPP-215ENST00000483938 A0A1B0GU69 56 aa0.37□□□□□ -2.35
LPP-215ENST00000483938 PHGR1C9JFL3 82 aa0.37□□□□□ -2.35
LPP-215ENST00000483938 IGLC3P0DOY3 106 aa0.37□□□□□ -2.35
LPP-215ENST00000483938 COX6B1P14854 86 aa0.37□□□□□ -2.35
LPP-215ENST00000483938 DEFB107AQ8IZN7 70 aa0.37□□□□□ -2.35
LPP-215ENST00000483938 USMG5Q96IX5 58 aa0.37□□□□□ -2.35
LPP-215ENST00000483938 ZNF292O60281 2723 aa0.37□□□□□ -2.35
LPP-215ENST00000483938 KIAA0556O60303 1618 aa0.37□□□□□ -2.35
LPP-215ENST00000483938 RGPD8O14715 1765 aaPredicted RBP0.37□□□□□ -2.35
LPP-215ENST00000483938 RGPD5Q99666 1765 aa0.37□□□□□ -2.35
LPP-215ENST00000483938 NCOR2Q9Y618 2525 aa0.36□□□□□ -2.35
LPP-215ENST00000483938 USF3Q68DE3 2245 aa0.36□□□□□ -2.35
LPP-215ENST00000483938 LINC00959A0A1B0GUT2 108 aa0.36□□□□□ -2.35
LPP-215ENST00000483938 A0A1B0GUT8 65 aa0.36□□□□□ -2.35
LPP-215ENST00000483938 CEBPZOSA8MTT3 80 aa0.36□□□□□ -2.35
LPP-215ENST00000483938 IGLC2P0DOY2 106 aa0.36□□□□□ -2.35
LPP-215ENST00000483938 COX8AP10176 69 aa0.36□□□□□ -2.35
LPP-215ENST00000483938 Q5VSD8 79 aa0.36□□□□□ -2.35
LPP-215ENST00000483938 FRAS1Q86XX4 4008 aa0.36□□□□□ -2.35
LPP-215ENST00000483938 ANKARQ7Z5J8 1434 aa0.36□□□□□ -2.35
LPP-215ENST00000483938 ZFHX3Q15911 3703 aa0.36□□□□□ -2.35
LPP-215ENST00000483938 KMT2DO14686 5537 aa0.36□□□□□ -2.35
LPP-215ENST00000483938 QSER1Q2KHR3 1735 aa0.35□□□□□ -2.35
LPP-215ENST00000483938 DMBT1Q9UGM3 2413 aaPredicted RBP0.35□□□□□ -2.35
LPP-215ENST00000483938 MDN1Q9NU22 5596 aa0.35□□□□□ -2.35
LPP-215ENST00000483938 URB2Q14146 1524 aaKnown RBP0.35□□□□□ -2.35
LPP-215ENST00000483938 PTPN13Q12923 2485 aa0.35□□□□□ -2.35
LPP-215ENST00000483938 NDUFB1O75438 58 aa0.35□□□□□ -2.35
LPP-215ENST00000483938 HMGA1P17096 107 aaKnown RBP0.35□□□□□ -2.35
LPP-215ENST00000483938 DEFB121Q5J5C9 76 aa0.35□□□□□ -2.35
LPP-215ENST00000483938 BVES-AS1Q5T3Y7 98 aa0.35□□□□□ -2.35
LPP-215ENST00000483938 ATP5EP2Q5VTU8 51 aa0.35□□□□□ -2.35
LPP-215ENST00000483938 IGSF10Q6WRI0 2623 aa0.35□□□□□ -2.35
LPP-215ENST00000483938 UNC79Q9P2D8 2635 aa0.34□□□□□ -2.35
LPP-215ENST00000483938 CNOT1A5YKK6 2376 aaKnown RBP0.34□□□□□ -2.35
LPP-215ENST00000483938 SLIT1O75093 1534 aa0.34□□□□□ -2.35
LPP-215ENST00000483938 MAGI3Q5TCQ9 1506 aa0.34□□□□□ -2.35
LPP-215ENST00000483938 SPTA1P02549 2419 aa0.34□□□□□ -2.35
LPP-215ENST00000483938 ABCA8O94911 1581 aa0.34□□□□□ -2.36
LPP-215ENST00000483938 SPRR1AP35321 89 aa0.34□□□□□ -2.36
LPP-215ENST00000483938 CELSR2Q9HCU4 2923 aa0.34□□□□□ -2.36
LPP-215ENST00000483938 RGPD2P0DJD1 1756 aa0.34□□□□□ -2.36
LPP-215ENST00000483938 COL14A1Q05707 1796 aaKnown RBP0.34□□□□□ -2.36
LPP-215ENST00000483938 SCN11AQ9UI33 1791 aa0.34□□□□□ -2.36
LPP-215ENST00000483938 CCDC88BA6NC98 1476 aa0.34□□□□□ -2.36
LPP-215ENST00000483938 SYNE2Q8WXH0 6885 aaKnown RBP0.34□□□□□ -2.36
LPP-215ENST00000483938 ANK2Q01484 3957 aa0.33□□□□□ -2.36
LPP-215ENST00000483938 UBR3Q6ZT12 1888 aa0.33□□□□□ -2.36
LPP-215ENST00000483938 RGPD1P0DJD0 1748 aa0.33□□□□□ -2.36
LPP-215ENST00000483938 TIAM2Q8IVF5 1701 aa0.33□□□□□ -2.36
LPP-215ENST00000483938 CEP170BQ9Y4F5 1589 aaPredicted RBP0.33□□□□□ -2.36
LPP-215ENST00000483938 LTN1O94822 1766 aa0.33□□□□□ -2.36
LPP-215ENST00000483938 H3BUT2 72 aa0.33□□□□□ -2.36
LPP-215ENST00000483938 K7EQZ3 153 aa0.33□□□□□ -2.36
LPP-215ENST00000483938 SPINK4O60575 86 aa0.33□□□□□ -2.36
LPP-215ENST00000483938 DEFB112Q30KQ8 113 aa0.33□□□□□ -2.36
LPP-215ENST00000483938 C18orf32Q8TCD1 76 aa0.33□□□□□ -2.36
LPP-215ENST00000483938 PIK3C2BO00750 1634 aa0.33□□□□□ -2.36
LPP-215ENST00000483938 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.33□□□□□ -2.36
LPP-215ENST00000483938 LRRC7Q96NW7 1537 aa0.33□□□□□ -2.36
LPP-215ENST00000483938 NCOR1O75376 2440 aa0.33□□□□□ -2.36
LPP-215ENST00000483938 SPTY2D1-AS1A0A0U1RR47 76 aa0.32□□□□□ -2.36
LPP-215ENST00000483938 RPL38P63173 70 aaKnown RBP0.32□□□□□ -2.36
LPP-215ENST00000483938 CRIPTQ9P021 101 aa0.32□□□□□ -2.36
LPP-215ENST00000483938 PPRC1Q5VV67 1664 aaKnown RBP0.32□□□□□ -2.36
LPP-215ENST00000483938 POLR1AO95602 1720 aaPredicted RBP0.32□□□□□ -2.36
LPP-215ENST00000483938 LRRIQ1Q96JM4 1722 aa0.32□□□□□ -2.36
LPP-215ENST00000483938 TSC2P49815 1807 aa0.31□□□□□ -2.36
LPP-215ENST00000483938 CHD6Q8TD26 2715 aa0.31□□□□□ -2.36
LPP-215ENST00000483938 CLIP1P30622 1438 aa0.31□□□□□ -2.36
LPP-215ENST00000483938 CHD9Q3L8U1 2897 aa0.31□□□□□ -2.36
LPP-215ENST00000483938 ABCA2Q9BZC7 2435 aa0.31□□□□□ -2.36
LPP-215ENST00000483938 TRAV21A0A0B4J279 112 aa0.31□□□□□ -2.36
LPP-215ENST00000483938 LOC730098B7Z3J9 87 aa0.31□□□□□ -2.36
LPP-215ENST00000483938 UMAD1C9J7I0 102 aa0.31□□□□□ -2.36
LPP-215ENST00000483938 I3L3M4 83 aa0.31□□□□□ -2.36
LPP-215ENST00000483938 CCL22O00626 93 aa0.31□□□□□ -2.36
LPP-215ENST00000483938 COX7BP24311 80 aa0.31□□□□□ -2.36
LPP-215ENST00000483938 GAFA1Q96PS6 74 aa0.31□□□□□ -2.36
LPP-215ENST00000483938 SMCO4Q9NRQ5 59 aa0.31□□□□□ -2.36
LPP-215ENST00000483938 BCORQ6W2J9 1755 aa0.31□□□□□ -2.36
LPP-215ENST00000483938 ARFGEF2Q9Y6D5 1785 aa0.31□□□□□ -2.36
LPP-215ENST00000483938 ATRQ13535 2644 aa0.31□□□□□ -2.36
LPP-215ENST00000483938 USP32Q8NFA0 1604 aa0.31□□□□□ -2.36
LPP-215ENST00000483938 ANKRD50Q9ULJ7 1429 aa0.3□□□□□ -2.36
LPP-215ENST00000483938 LCE6AA0A183 80 aa0.3□□□□□ -2.36
LPP-215ENST00000483938 PDCD5O14737 125 aa0.3□□□□□ -2.36
LPP-215ENST00000483938 SMIM13P0DJ93 91 aa0.3□□□□□ -2.36
LPP-215ENST00000483938 IFI27P40305 119 aaPredicted RBP0.3□□□□□ -2.36
LPP-215ENST00000483938 COX6B2Q6YFQ2 88 aa0.3□□□□□ -2.36
LPP-215ENST00000483938 UBR5O95071 2799 aaPredicted RBP0.3□□□□□ -2.36
LPP-215ENST00000483938 CFAP43Q8NDM7 1665 aa0.3□□□□□ -2.36
LPP-215ENST00000483938 PREX1Q8TCU6 1659 aa0.3□□□□□ -2.36
LPP-215ENST00000483938 OTOGQ6ZRI0 2925 aa0.3□□□□□ -2.36
LPP-215ENST00000483938 MYO5CQ9NQX4 1742 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms