RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 PFN2P35080 140 aa5.98□□□□□ -1.45
SMARCC1-205ENST00000483847 Q8N377 158 aa5.98□□□□□ -1.45
SMARCC1-205ENST00000483847 NAT8Q9UHE5 227 aa5.98□□□□□ -1.45
SMARCC1-205ENST00000483847 ORMDL2Q53FV1 153 aa5.97□□□□□ -1.45
SMARCC1-205ENST00000483847 SND1-IT1Q9HBX3 110 aa5.97□□□□□ -1.45
SMARCC1-205ENST00000483847 IGLV5-45A0A087WSX0 123 aa5.96□□□□□ -1.46
SMARCC1-205ENST00000483847 COMMD7Q86VX2 200 aa5.96□□□□□ -1.46
SMARCC1-205ENST00000483847 NDUFA12Q9UI09 145 aa5.96□□□□□ -1.46
SMARCC1-205ENST00000483847 LAMTOR2Q9Y2Q5 125 aa5.96□□□□□ -1.46
SMARCC1-205ENST00000483847 IGLV8-61A0A075B6I0 122 aa5.95□□□□□ -1.46
SMARCC1-205ENST00000483847 TINCRA0A1B0GVN0 87 aa5.95□□□□□ -1.46
SMARCC1-205ENST00000483847 ATP5LO75964 103 aa5.95□□□□□ -1.46
SMARCC1-205ENST00000483847 PCOTHQ58A44 107 aa5.95□□□□□ -1.46
SMARCC1-205ENST00000483847 PAPPA-AS1Q5QFB9 102 aa5.95□□□□□ -1.46
SMARCC1-205ENST00000483847 TIMM17AQ99595 171 aa5.95□□□□□ -1.46
SMARCC1-205ENST00000483847 ZNF706Q9Y5V0 76 aaPredicted RBP5.95□□□□□ -1.46
SMARCC1-205ENST00000483847 FLGP20930 4061 aaPredicted RBP5.94□□□□□ -1.46
SMARCC1-205ENST00000483847 ADCYAP1P18509 176 aa5.94□□□□□ -1.46
SMARCC1-205ENST00000483847 RPL24P83731 157 aaKnown RBP5.94□□□□□ -1.46
SMARCC1-205ENST00000483847 ATP5L2Q7Z4Y8 100 aa5.94□□□□□ -1.46
SMARCC1-205ENST00000483847 TOMM6Q96B49 74 aa5.94□□□□□ -1.46
SMARCC1-205ENST00000483847 K7EMI3 77 aa5.93□□□□□ -1.46
SMARCC1-205ENST00000483847 M0R2T5 61 aa5.93□□□□□ -1.46
SMARCC1-205ENST00000483847 FAM19A2Q8N3H0 131 aa5.93□□□□□ -1.46
SMARCC1-205ENST00000483847 SSPOA2VEC9 5147 aa5.92□□□□□ -1.46
SMARCC1-205ENST00000483847 SLC25A20O43772 301 aa5.92□□□□□ -1.46
SMARCC1-205ENST00000483847 RPS29P62273 56 aaKnown RBP5.92□□□□□ -1.46
SMARCC1-205ENST00000483847 MOBPQ13875 183 aa5.92□□□□□ -1.46
SMARCC1-205ENST00000483847 ERASQ7Z444 233 aa5.92□□□□□ -1.46
SMARCC1-205ENST00000483847 SMCR5Q8TEV8 140 aa5.92□□□□□ -1.46
SMARCC1-205ENST00000483847 ERG28Q9UKR5 140 aa5.92□□□□□ -1.46
SMARCC1-205ENST00000483847 LINC00483Q53H64 154 aa5.91□□□□□ -1.46
SMARCC1-205ENST00000483847 ZNF625Q96I27 306 aaPredicted RBP5.91□□□□□ -1.46
SMARCC1-205ENST00000483847 SCGB3A1Q96QR1 104 aa5.91□□□□□ -1.46
SMARCC1-205ENST00000483847 CST9LQ9H4G1 147 aa5.91□□□□□ -1.46
SMARCC1-205ENST00000483847 NXT2Q9NPJ8 142 aaKnown RBP5.91□□□□□ -1.46
SMARCC1-205ENST00000483847 USH2AO75445 5202 aa5.91□□□□□ -1.46
SMARCC1-205ENST00000483847 IGLV9-49A0A0B4J1Y8 123 aa5.9□□□□□ -1.46
SMARCC1-205ENST00000483847 IGLV5-39A0A0G2JS06 123 aa5.9□□□□□ -1.46
SMARCC1-205ENST00000483847 GAGE2AQ6NT46 116 aa5.89□□□□□ -1.47
SMARCC1-205ENST00000483847 G0S2P27469 103 aa5.88□□□□□ -1.47
SMARCC1-205ENST00000483847 COX17Q14061 63 aa5.88□□□□□ -1.47
SMARCC1-205ENST00000483847 KRTAP4-16G5E9R7 235 aaPredicted RBP5.87□□□□□ -1.47
SMARCC1-205ENST00000483847 H3BRM9 83 aa5.87□□□□□ -1.47
SMARCC1-205ENST00000483847 PRYO14603 147 aa5.87□□□□□ -1.47
SMARCC1-205ENST00000483847 SPRR1AP35321 89 aa5.87□□□□□ -1.47
SMARCC1-205ENST00000483847 UQCC3Q6UW78 93 aa5.87□□□□□ -1.47
SMARCC1-205ENST00000483847 SSBP3-AS1Q7Z2R9 100 aa5.87□□□□□ -1.47
SMARCC1-205ENST00000483847 C9orf92A6NGG3 77 aa5.86□□□□□ -1.47
SMARCC1-205ENST00000483847 ERC2-IT1O76042 136 aa5.86□□□□□ -1.47
SMARCC1-205ENST00000483847 PMVKQ15126 192 aa5.86□□□□□ -1.47
SMARCC1-205ENST00000483847 PEA15Q15121 130 aa5.85□□□□□ -1.47
SMARCC1-205ENST00000483847 FCGBPQ9Y6R7 5405 aaPredicted RBP5.84□□□□□ -1.47
SMARCC1-205ENST00000483847 A0A0U1RRA0 63 aa5.84□□□□□ -1.47
SMARCC1-205ENST00000483847 ETDCA0A1B0GVM5 59 aa5.84□□□□□ -1.47
SMARCC1-205ENST00000483847 IGLC3P0DOY3 106 aa5.84□□□□□ -1.47
SMARCC1-205ENST00000483847 ZNF22P17026 224 aaPredicted RBP5.84□□□□□ -1.47
SMARCC1-205ENST00000483847 KIAA1644Q3SXP7 199 aa5.84□□□□□ -1.47
SMARCC1-205ENST00000483847 KCNQ1DNQ9H478 68 aa5.84□□□□□ -1.47
SMARCC1-205ENST00000483847 NCR3O14931 201 aa5.83□□□□□ -1.48
SMARCC1-205ENST00000483847 COX6B2Q6YFQ2 88 aa5.83□□□□□ -1.48
SMARCC1-205ENST00000483847 APOC3P02656 99 aa5.82□□□□□ -1.48
SMARCC1-205ENST00000483847 LINC00158P58513 81 aa5.82□□□□□ -1.48
SMARCC1-205ENST00000483847 SVBPQ8N300 66 aa5.82□□□□□ -1.48
SMARCC1-205ENST00000483847 TRBV10-3A0A0K0K1G6 114 aa5.81□□□□□ -1.48
SMARCC1-205ENST00000483847 LOC105371267A0A1B0GV96 52 aa5.81□□□□□ -1.48
SMARCC1-205ENST00000483847 LINC01546A6NGU7 62 aa5.81□□□□□ -1.48
SMARCC1-205ENST00000483847 B5MCH6 92 aa5.81□□□□□ -1.48
SMARCC1-205ENST00000483847 BOD1L2Q8IYS8 172 aa5.81□□□□□ -1.48
SMARCC1-205ENST00000483847 Q9BRP9 147 aa5.81□□□□□ -1.48
SMARCC1-205ENST00000483847 TMEM218A2RU14 115 aa5.8□□□□□ -1.48
SMARCC1-205ENST00000483847 C9orf153Q5TBE3 101 aa5.8□□□□□ -1.48
SMARCC1-205ENST00000483847 SYNE2Q8WXH0 6885 aaKnown RBP5.79□□□□□ -1.48
SMARCC1-205ENST00000483847 LINC01549A6NIU2 74 aa5.79□□□□□ -1.48
SMARCC1-205ENST00000483847 SNAPINO95295 136 aa5.79□□□□□ -1.48
SMARCC1-205ENST00000483847 NDUFA6P56556 154 aa5.79□□□□□ -1.48
SMARCC1-205ENST00000483847 SEC11CQ9BY50 192 aa5.79□□□□□ -1.48
SMARCC1-205ENST00000483847 C11orf86A6NJI1 115 aa5.78□□□□□ -1.48
SMARCC1-205ENST00000483847 C10orf91Q5T1B1 145 aa5.78□□□□□ -1.48
SMARCC1-205ENST00000483847 IGLV6-57P01721 117 aa5.77□□□□□ -1.49
SMARCC1-205ENST00000483847 MT-ND4LP03901 98 aa5.77□□□□□ -1.49
SMARCC1-205ENST00000483847 SMIM13P0DJ93 91 aa5.77□□□□□ -1.49
SMARCC1-205ENST00000483847 SFTA2Q6UW10 78 aa5.77□□□□□ -1.49
SMARCC1-205ENST00000483847 MACF1Q9UPN3 7388 aaKnown RBP5.76□□□□□ -1.49
SMARCC1-205ENST00000483847 A0A096LNJ9 63 aa5.76□□□□□ -1.49
SMARCC1-205ENST00000483847 TMEM170BQ5T4T1 132 aa5.76□□□□□ -1.49
SMARCC1-205ENST00000483847 HRCT1Q6UXD1 115 aa5.76□□□□□ -1.49
SMARCC1-205ENST00000483847 MIR7-3HGQ8N6C7 128 aa5.76□□□□□ -1.49
SMARCC1-205ENST00000483847 TRAV9-1A0A075B6T8 112 aa5.75□□□□□ -1.49
SMARCC1-205ENST00000483847 Q6ZRX8 168 aa5.75□□□□□ -1.49
SMARCC1-205ENST00000483847 FA2HQ7L5A8 372 aa5.74□□□□□ -1.49
SMARCC1-205ENST00000483847 ST20-AS1Q8NBB2 130 aa5.74□□□□□ -1.49
SMARCC1-205ENST00000483847 RPL37P61927 97 aaKnown RBP5.73□□□□□ -1.49
SMARCC1-205ENST00000483847 LIMD2Q9BT23 127 aa5.73□□□□□ -1.49
SMARCC1-205ENST00000483847 SMCO4Q9NRQ5 59 aa5.73□□□□□ -1.49
SMARCC1-205ENST00000483847 DDTP30046 118 aa5.72□□□□□ -1.49
SMARCC1-205ENST00000483847 S100A12P80511 92 aa5.72□□□□□ -1.49
SMARCC1-205ENST00000483847 MEIG1Q5JSS6 88 aa5.72□□□□□ -1.49
SMARCC1-205ENST00000483847 BAGE3Q86Y29 109 aa5.72□□□□□ -1.49
SMARCC1-205ENST00000483847 KRTAP9-8Q9BYQ0 159 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms