RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 TMEM170BQ5T4T1 132 aa10.4□□□□□ -0.74
ATG4B-221ENST00000483778 IGKV2D-26A0A0A0MRZ7 120 aa10.38□□□□□ -0.75
ATG4B-221ENST00000483778 A0A0U1RRA0 63 aa10.38□□□□□ -0.75
ATG4B-221ENST00000483778 RPL24P83731 157 aaKnown RBP10.38□□□□□ -0.75
ATG4B-221ENST00000483778 LINC00158P58513 81 aa10.36□□□□□ -0.75
ATG4B-221ENST00000483778 CBLN2Q8IUK8 224 aa10.36□□□□□ -0.75
ATG4B-221ENST00000483778 CHTOPQ9Y3Y2 248 aaKnown RBP10.35□□□□□ -0.75
ATG4B-221ENST00000483778 TMEM223A0PJW6 202 aa10.34□□□□□ -0.75
ATG4B-221ENST00000483778 HIGD2AQ9BW72 106 aa10.34□□□□□ -0.75
ATG4B-221ENST00000483778 IGLV7-46A0A075B6I9 117 aa10.33□□□□□ -0.76
ATG4B-221ENST00000483778 APOC3P02656 99 aa10.32□□□□□ -0.76
ATG4B-221ENST00000483778 SMIM13P0DJ93 91 aa10.32□□□□□ -0.76
ATG4B-221ENST00000483778 LCE2AQ5TA79 106 aaPredicted RBP10.32□□□□□ -0.76
ATG4B-221ENST00000483778 YPEL4Q96NS1 127 aa10.31□□□□□ -0.76
ATG4B-221ENST00000483778 SPRR4Q96PI1 79 aa10.31□□□□□ -0.76
ATG4B-221ENST00000483778 IFI27L1Q96BM0 104 aa10.3□□□□□ -0.76
ATG4B-221ENST00000483778 TPRXLQ17RH7 258 aa10.29□□□□□ -0.76
ATG4B-221ENST00000483778 CDIP1Q9H305 208 aa10.29□□□□□ -0.76
ATG4B-221ENST00000483778 TRAV12-1A0A0B4J245 112 aa10.28□□□□□ -0.76
ATG4B-221ENST00000483778 SFTA2Q6UW10 78 aa10.28□□□□□ -0.76
ATG4B-221ENST00000483778 A0A0U1RQV1 116 aa10.27□□□□□ -0.77
ATG4B-221ENST00000483778 NCR3O14931 201 aa10.27□□□□□ -0.77
ATG4B-221ENST00000483778 BOD1L2Q8IYS8 172 aa10.27□□□□□ -0.77
ATG4B-221ENST00000483778 FAM19A2Q8N3H0 131 aa10.27□□□□□ -0.77
ATG4B-221ENST00000483778 FAT4Q6V0I7 4981 aa10.27□□□□□ -0.77
ATG4B-221ENST00000483778 MIR7-3HGQ8N6C7 128 aa10.26□□□□□ -0.77
ATG4B-221ENST00000483778 DAND5Q8N907 189 aa10.26□□□□□ -0.77
ATG4B-221ENST00000483778 SMCR5Q8TEV8 140 aa10.26□□□□□ -0.77
ATG4B-221ENST00000483778 KRTAP9-2Q9BYQ4 174 aa10.26□□□□□ -0.77
ATG4B-221ENST00000483778 PPDPFQ9H3Y8 114 aa10.26□□□□□ -0.77
ATG4B-221ENST00000483778 MUC17Q685J3 4493 aa10.25□□□□□ -0.77
ATG4B-221ENST00000483778 KRTAP4-16G5E9R7 235 aaPredicted RBP10.25□□□□□ -0.77
ATG4B-221ENST00000483778 SPRR1AP35321 89 aa10.25□□□□□ -0.77
ATG4B-221ENST00000483778 CHCHD1Q96BP2 118 aaKnown RBP10.25□□□□□ -0.77
ATG4B-221ENST00000483778 SNAPINO95295 136 aa10.24□□□□□ -0.77
ATG4B-221ENST00000483778 KCNQ1DNQ9H478 68 aa10.24□□□□□ -0.77
ATG4B-221ENST00000483778 CTAG1AP78358 180 aa10.23□□□□□ -0.77
ATG4B-221ENST00000483778 MEIG1Q5JSS6 88 aa10.23□□□□□ -0.77
ATG4B-221ENST00000483778 TRBV10-3A0A0K0K1G6 114 aa10.22□□□□□ -0.77
ATG4B-221ENST00000483778 PRYO14603 147 aa10.22□□□□□ -0.77
ATG4B-221ENST00000483778 ATP6V1G1O75348 118 aa10.22□□□□□ -0.77
ATG4B-221ENST00000483778 TSPEAR-AS2P59090 65 aa10.22□□□□□ -0.77
ATG4B-221ENST00000483778 SVBPQ8N300 66 aa10.22□□□□□ -0.77
ATG4B-221ENST00000483778 Q8NBF4 154 aa10.22□□□□□ -0.77
ATG4B-221ENST00000483778 NDUFA12Q9UI09 145 aa10.22□□□□□ -0.77
ATG4B-221ENST00000483778 LINC00337Q8N6G1 96 aa10.21□□□□□ -0.77
ATG4B-221ENST00000483778 ERC2-IT1O76042 136 aa10.2□□□□□ -0.78
ATG4B-221ENST00000483778 SPAG11AQ6PDA7 123 aa10.2□□□□□ -0.78
ATG4B-221ENST00000483778 H0Y8G0 127 aa10.19□□□□□ -0.78
ATG4B-221ENST00000483778 LINC00310P59036 64 aa10.19□□□□□ -0.78
ATG4B-221ENST00000483778 HERV-K104P63124 156 aa10.19□□□□□ -0.78
ATG4B-221ENST00000483778 ETDCA0A1B0GVM5 59 aa10.18□□□□□ -0.78
ATG4B-221ENST00000483778 NDUFA5Q16718 116 aa10.17□□□□□ -0.78
ATG4B-221ENST00000483778 ZNF706Q9Y5V0 76 aaPredicted RBP10.17□□□□□ -0.78
ATG4B-221ENST00000483778 MYMXA0A1B0GTQ4 84 aa10.16□□□□□ -0.78
ATG4B-221ENST00000483778 B5MCH6 92 aa10.16□□□□□ -0.78
ATG4B-221ENST00000483778 HSBP1O75506 76 aa10.16□□□□□ -0.78
ATG4B-221ENST00000483778 KRTAP13-3Q3SY46 172 aa10.16□□□□□ -0.78
ATG4B-221ENST00000483778 C4orf48Q5BLP8 95 aa10.16□□□□□ -0.78
ATG4B-221ENST00000483778 LINC00483Q53H64 154 aa10.15□□□□□ -0.78
ATG4B-221ENST00000483778 GAGE2AQ6NT46 116 aa10.15□□□□□ -0.78
ATG4B-221ENST00000483778 LOC107984156A0A0G2JMH3 177 aa10.14□□□□□ -0.79
ATG4B-221ENST00000483778 LEPROTO15243 131 aa10.14□□□□□ -0.79
ATG4B-221ENST00000483778 TRGC2P03986 189 aa10.14□□□□□ -0.79
ATG4B-221ENST00000483778 ARL17AQ8IVW1 177 aa10.14□□□□□ -0.79
ATG4B-221ENST00000483778 PMCHL2Q9BQD1 86 aa10.14□□□□□ -0.79
ATG4B-221ENST00000483778 Q9BRP9 147 aa10.14□□□□□ -0.79
ATG4B-221ENST00000483778 KRTAP4-1Q9BYQ7 146 aa10.14□□□□□ -0.79
ATG4B-221ENST00000483778 EIF4EBP3O60516 100 aaPredicted RBP10.13□□□□□ -0.79
ATG4B-221ENST00000483778 FP248Q71RG6 208 aaPredicted RBP10.13□□□□□ -0.79
ATG4B-221ENST00000483778 SERF1AO75920 110 aa10.12□□□□□ -0.79
ATG4B-221ENST00000483778 IGLV9-49A0A0B4J1Y8 123 aa10.11□□□□□ -0.79
ATG4B-221ENST00000483778 LINC00587B1AMM8 73 aa10.11□□□□□ -0.79
ATG4B-221ENST00000483778 DDTP30046 118 aa10.11□□□□□ -0.79
ATG4B-221ENST00000483778 MOBPQ13875 183 aa10.11□□□□□ -0.79
ATG4B-221ENST00000483778 MAP1LC3CQ9BXW4 147 aa10.11□□□□□ -0.79
ATG4B-221ENST00000483778 J3QQQ9 107 aa10.1□□□□□ -0.79
ATG4B-221ENST00000483778 LEPROTL1O95214 131 aa10.1□□□□□ -0.79
ATG4B-221ENST00000483778 SPINK1P00995 79 aa10.1□□□□□ -0.79
ATG4B-221ENST00000483778 FABP4P15090 132 aa10.1□□□□□ -0.79
ATG4B-221ENST00000483778 TRBV10-2A0A0K0K1G8 114 aa10.08□□□□□ -0.8
ATG4B-221ENST00000483778 SOSTDC1Q6X4U4 206 aa10.08□□□□□ -0.8
ATG4B-221ENST00000483778 ASB16-AS1Q495Z4 193 aa10.07□□□□□ -0.8
ATG4B-221ENST00000483778 ADAMTSL4-AS1Q5T5F5 129 aa10.07□□□□□ -0.8
ATG4B-221ENST00000483778 Q6ZRX8 168 aa10.07□□□□□ -0.8
ATG4B-221ENST00000483778 Q8N377 158 aa10.07□□□□□ -0.8
ATG4B-221ENST00000483778 DPM2O94777 84 aa10.06□□□□□ -0.8
ATG4B-221ENST00000483778 IGLV6-57P01721 117 aa10.06□□□□□ -0.8
ATG4B-221ENST00000483778 SLC7A5P1Q8MH63 180 aa10.06□□□□□ -0.8
ATG4B-221ENST00000483778 PLNP26678 52 aa10.05□□□□□ -0.8
ATG4B-221ENST00000483778 NPC2P61916 151 aa10.05□□□□□ -0.8
ATG4B-221ENST00000483778 SSBP3-AS1Q7Z2R9 100 aa10.05□□□□□ -0.8
ATG4B-221ENST00000483778 SPANXB1Q9NS25 103 aaPredicted RBP10.04□□□□□ -0.8
ATG4B-221ENST00000483778 IGKCP01834 107 aa10.03□□□□□ -0.8
ATG4B-221ENST00000483778 ST20-AS1Q8NBB2 130 aa10.03□□□□□ -0.8
ATG4B-221ENST00000483778 LGALS3P17931 250 aaKnown RBP10.02□□□□□ -0.81
ATG4B-221ENST00000483778 S100A12P80511 92 aa10.02□□□□□ -0.81
ATG4B-221ENST00000483778 A0A0J9YXY3 114 aa10.01□□□□□ -0.81
ATG4B-221ENST00000483778 NDUFC2O95298 119 aa10.01□□□□□ -0.81
ATG4B-221ENST00000483778 S100A7L2Q5SY68 101 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 217 ms