RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 TMEM223A0PJW6 202 aa11.64□□□□□ -0.55
HPS4-213ENST00000483631 M0R378 163 aa11.63□□□□□ -0.55
HPS4-213ENST00000483631 KRTAP13-2Q52LG2 175 aa11.63□□□□□ -0.55
HPS4-213ENST00000483631 FAM19A1Q7Z5A9 133 aa11.63□□□□□ -0.55
HPS4-213ENST00000483631 TMEM238C9JI98 176 aa11.62□□□□□ -0.55
HPS4-213ENST00000483631 TSPAN13O95857 204 aa11.62□□□□□ -0.55
HPS4-213ENST00000483631 LINC00158P58513 81 aa11.62□□□□□ -0.55
HPS4-213ENST00000483631 PRLHP81277 87 aa11.62□□□□□ -0.55
HPS4-213ENST00000483631 Q8NDZ9 215 aa11.61□□□□□ -0.55
HPS4-213ENST00000483631 ANAPC11Q9NYG5 84 aa11.61□□□□□ -0.55
HPS4-213ENST00000483631 IGKV2D-26A0A0A0MRZ7 120 aa11.59□□□□□ -0.55
HPS4-213ENST00000483631 HERV-K104P63124 156 aa11.59□□□□□ -0.55
HPS4-213ENST00000483631 LINC00587B1AMM8 73 aa11.58□□□□□ -0.56
HPS4-213ENST00000483631 HSBP1O75506 76 aa11.58□□□□□ -0.56
HPS4-213ENST00000483631 LINC00304Q8N9R0 145 aa11.58□□□□□ -0.56
HPS4-213ENST00000483631 PLEKHB2Q96CS7 222 aa11.58□□□□□ -0.56
HPS4-213ENST00000483631 CBLN2Q8IUK8 224 aa11.57□□□□□ -0.56
HPS4-213ENST00000483631 ATP6V1G1O75348 118 aa11.56□□□□□ -0.56
HPS4-213ENST00000483631 SMIM13P0DJ93 91 aa11.54□□□□□ -0.56
HPS4-213ENST00000483631 A0A0U1RRA0 63 aa11.53□□□□□ -0.56
HPS4-213ENST00000483631 PRYO14603 147 aa11.53□□□□□ -0.56
HPS4-213ENST00000483631 MEIG1Q5JSS6 88 aa11.53□□□□□ -0.56
HPS4-213ENST00000483631 BOD1L2Q8IYS8 172 aa11.52□□□□□ -0.57
HPS4-213ENST00000483631 FAM19A2Q8N3H0 131 aa11.52□□□□□ -0.57
HPS4-213ENST00000483631 HIGD2AQ9BW72 106 aa11.52□□□□□ -0.57
HPS4-213ENST00000483631 MAP1LC3CQ9BXW4 147 aa11.52□□□□□ -0.57
HPS4-213ENST00000483631 NDUFA12Q9UI09 145 aa11.52□□□□□ -0.57
HPS4-213ENST00000483631 MYMXA0A1B0GTQ4 84 aa11.51□□□□□ -0.57
HPS4-213ENST00000483631 MIR7-3HGQ8N6C7 128 aa11.51□□□□□ -0.57
HPS4-213ENST00000483631 LINC00337Q8N6G1 96 aa11.51□□□□□ -0.57
HPS4-213ENST00000483631 ZNF706Q9Y5V0 76 aaPredicted RBP11.51□□□□□ -0.57
HPS4-213ENST00000483631 LEPROTL1O95214 131 aa11.5□□□□□ -0.57
HPS4-213ENST00000483631 SPRR1AP35321 89 aa11.5□□□□□ -0.57
HPS4-213ENST00000483631 KCNQ1DNQ9H478 68 aa11.5□□□□□ -0.57
HPS4-213ENST00000483631 TRGC2P03986 189 aa11.49□□□□□ -0.57
HPS4-213ENST00000483631 SPRR4Q96PI1 79 aa11.49□□□□□ -0.57
HPS4-213ENST00000483631 LOC107984156A0A0G2JMH3 177 aa11.48□□□□□ -0.57
HPS4-213ENST00000483631 PLNP26678 52 aa11.48□□□□□ -0.57
HPS4-213ENST00000483631 SPAG11AQ6PDA7 123 aa11.48□□□□□ -0.57
HPS4-213ENST00000483631 ARL17AQ8IVW1 177 aa11.48□□□□□ -0.57
HPS4-213ENST00000483631 LEPROTO15243 131 aa11.46□□□□□ -0.57
HPS4-213ENST00000483631 S100A12P80511 92 aa11.46□□□□□ -0.57
HPS4-213ENST00000483631 HSPB8Q9UJY1 196 aa11.46□□□□□ -0.57
HPS4-213ENST00000483631 A0A0U1RQV1 116 aa11.45□□□□□ -0.58
HPS4-213ENST00000483631 KRTAP4-16G5E9R7 235 aaPredicted RBP11.45□□□□□ -0.58
HPS4-213ENST00000483631 SERF1AO75920 110 aa11.45□□□□□ -0.58
HPS4-213ENST00000483631 LINC00310P59036 64 aa11.45□□□□□ -0.58
HPS4-213ENST00000483631 TPRXLQ17RH7 258 aa11.45□□□□□ -0.58
HPS4-213ENST00000483631 C3orf22Q8N5N4 141 aa11.45□□□□□ -0.58
HPS4-213ENST00000483631 NCR3O14931 201 aa11.44□□□□□ -0.58
HPS4-213ENST00000483631 NMUP48645 174 aa11.44□□□□□ -0.58
HPS4-213ENST00000483631 TRBV10-2A0A0K0K1G8 114 aa11.43□□□□□ -0.58
HPS4-213ENST00000483631 H0Y8G0 127 aa11.43□□□□□ -0.58
HPS4-213ENST00000483631 RETNLBQ9BQ08 111 aa11.43□□□□□ -0.58
HPS4-213ENST00000483631 TRBV10-3A0A0K0K1G6 114 aa11.42□□□□□ -0.58
HPS4-213ENST00000483631 ETDCA0A1B0GVM5 59 aa11.42□□□□□ -0.58
HPS4-213ENST00000483631 DPM2O94777 84 aa11.42□□□□□ -0.58
HPS4-213ENST00000483631 TSPEAR-AS2P59090 65 aa11.42□□□□□ -0.58
HPS4-213ENST00000483631 HERVK_113P61574 105 aa11.42□□□□□ -0.58
HPS4-213ENST00000483631 MUC2Q02817 5179 aa11.41□□□□□ -0.58
HPS4-213ENST00000483631 J3QQQ9 107 aa11.41□□□□□ -0.58
HPS4-213ENST00000483631 IGLV7-46A0A075B6I9 117 aa11.4□□□□□ -0.58
HPS4-213ENST00000483631 SMCR5Q8TEV8 140 aa11.4□□□□□ -0.58
HPS4-213ENST00000483631 IGKCP01834 107 aa11.38□□□□□ -0.59
HPS4-213ENST00000483631 LINC00483Q53H64 154 aa11.38□□□□□ -0.59
HPS4-213ENST00000483631 C4orf48Q5BLP8 95 aa11.38□□□□□ -0.59
HPS4-213ENST00000483631 NDUFC2O95298 119 aa11.37□□□□□ -0.59
HPS4-213ENST00000483631 LGALS3P17931 250 aaKnown RBP11.37□□□□□ -0.59
HPS4-213ENST00000483631 DDTP30046 118 aa11.37□□□□□ -0.59
HPS4-213ENST00000483631 FP248Q71RG6 208 aaPredicted RBP11.37□□□□□ -0.59
HPS4-213ENST00000483631 MIEN1Q9BRT3 115 aa11.37□□□□□ -0.59
HPS4-213ENST00000483631 KRTAP9-2Q9BYQ4 174 aa11.37□□□□□ -0.59
HPS4-213ENST00000483631 CDIP1Q9H305 208 aa11.37□□□□□ -0.59
HPS4-213ENST00000483631 SPANXB1Q9NS25 103 aaPredicted RBP11.37□□□□□ -0.59
HPS4-213ENST00000483631 COLCA2A8K830 154 aa11.36□□□□□ -0.59
HPS4-213ENST00000483631 B5MCH6 92 aa11.36□□□□□ -0.59
HPS4-213ENST00000483631 FABP4P15090 132 aa11.36□□□□□ -0.59
HPS4-213ENST00000483631 DAND5Q8N907 189 aa11.35□□□□□ -0.59
HPS4-213ENST00000483631 SPINK1P00995 79 aa11.33□□□□□ -0.6
HPS4-213ENST00000483631 Q8NBF4 154 aa11.33□□□□□ -0.6
HPS4-213ENST00000483631 PPDPFQ9H3Y8 114 aa11.33□□□□□ -0.6
HPS4-213ENST00000483631 IGLV6-57P01721 117 aa11.32□□□□□ -0.6
HPS4-213ENST00000483631 Q6ZRX8 168 aa11.32□□□□□ -0.6
HPS4-213ENST00000483631 PMCHL2Q9BQD1 86 aa11.32□□□□□ -0.6
HPS4-213ENST00000483631 E9PLD3 99 aa11.31□□□□□ -0.6
HPS4-213ENST00000483631 S100A7L2Q5SY68 101 aa11.3□□□□□ -0.6
HPS4-213ENST00000483631 MUC17Q685J3 4493 aa11.29□□□□□ -0.6
HPS4-213ENST00000483631 RPS29P62273 56 aaKnown RBP11.29□□□□□ -0.6
HPS4-213ENST00000483631 GAGE2AQ6NT46 116 aa11.29□□□□□ -0.6
HPS4-213ENST00000483631 SSBP3-AS1Q7Z2R9 100 aa11.29□□□□□ -0.6
HPS4-213ENST00000483631 SLC7A5P1Q8MH63 180 aa11.29□□□□□ -0.6
HPS4-213ENST00000483631 A0A0J9YXY3 114 aa11.28□□□□□ -0.6
HPS4-213ENST00000483631 JOSD1Q15040 202 aaPredicted RBP11.28□□□□□ -0.6
HPS4-213ENST00000483631 Q9BRP9 147 aa11.28□□□□□ -0.6
HPS4-213ENST00000483631 CBY1Q9Y3M2 126 aa11.28□□□□□ -0.6
HPS4-213ENST00000483631 ERC2-IT1O76042 136 aa11.27□□□□□ -0.61
HPS4-213ENST00000483631 TRAV23DV6A0A075B6W5 121 aa11.26□□□□□ -0.61
HPS4-213ENST00000483631 C5orf52A6NGY3 159 aa11.25□□□□□ -0.61
HPS4-213ENST00000483631 SYS1-DBNDD2H3BUS1 97 aa11.25□□□□□ -0.61
HPS4-213ENST00000483631 SOSTDC1Q6X4U4 206 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms