RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 CHTOPQ9Y3Y2 248 aaKnown RBP7.15□□□□□ -1.26
HDLBP-239ENST00000483086 IGKV2-28A0A075B6P5 120 aa7.14□□□□□ -1.27
HDLBP-239ENST00000483086 IGKV2D-28P01615 120 aa7.14□□□□□ -1.27
HDLBP-239ENST00000483086 TRGC2P03986 189 aa7.14□□□□□ -1.27
HDLBP-239ENST00000483086 IFI27L1Q96BM0 104 aa7.14□□□□□ -1.27
HDLBP-239ENST00000483086 CHCHD1Q96BP2 118 aaKnown RBP7.14□□□□□ -1.27
HDLBP-239ENST00000483086 TRAV12-1A0A0B4J245 112 aa7.13□□□□□ -1.27
HDLBP-239ENST00000483086 TMEM238C9JI98 176 aa7.13□□□□□ -1.27
HDLBP-239ENST00000483086 KRTAP13-2Q52LG2 175 aa7.12□□□□□ -1.27
HDLBP-239ENST00000483086 A0A0U1RRA0 63 aa7.11□□□□□ -1.27
HDLBP-239ENST00000483086 TSPEAR-AS2P59090 65 aa7.11□□□□□ -1.27
HDLBP-239ENST00000483086 PRLHP81277 87 aa7.11□□□□□ -1.27
HDLBP-239ENST00000483086 NKAPP1Q8N9T2 125 aa7.11□□□□□ -1.27
HDLBP-239ENST00000483086 COLCA2A8K830 154 aa7.1□□□□□ -1.27
HDLBP-239ENST00000483086 M0R378 163 aa7.1□□□□□ -1.27
HDLBP-239ENST00000483086 SERF1AO75920 110 aa7.1□□□□□ -1.27
HDLBP-239ENST00000483086 RPL28P46779 137 aaKnown RBP7.1□□□□□ -1.27
HDLBP-239ENST00000483086 COX17Q14061 63 aa7.1□□□□□ -1.27
HDLBP-239ENST00000483086 TMEM126AQ9H061 195 aa7.09□□□□□ -1.27
HDLBP-239ENST00000483086 MUC17Q685J3 4493 aa7.09□□□□□ -1.27
HDLBP-239ENST00000483086 PCP4L1A6NKN8 68 aa7.08□□□□□ -1.28
HDLBP-239ENST00000483086 H0Y8G0 127 aa7.08□□□□□ -1.28
HDLBP-239ENST00000483086 HSBP1O75506 76 aa7.08□□□□□ -1.28
HDLBP-239ENST00000483086 SMIM13P0DJ93 91 aa7.08□□□□□ -1.28
HDLBP-239ENST00000483086 RPL13AP40429 203 aaKnown RBP7.07□□□□□ -1.28
HDLBP-239ENST00000483086 LINC00158P58513 81 aa7.07□□□□□ -1.28
HDLBP-239ENST00000483086 TSPAN13O95857 204 aa7.06□□□□□ -1.28
HDLBP-239ENST00000483086 UBE2AP49459 152 aa7.06□□□□□ -1.28
HDLBP-239ENST00000483086 PMCHL2Q9BQD1 86 aa7.06□□□□□ -1.28
HDLBP-239ENST00000483086 LEPROTL1O95214 131 aa7.05□□□□□ -1.28
HDLBP-239ENST00000483086 FAM19A1Q7Z5A9 133 aa7.05□□□□□ -1.28
HDLBP-239ENST00000483086 MIR7-3HGQ8N6C7 128 aa7.05□□□□□ -1.28
HDLBP-239ENST00000483086 CRYGAP11844 174 aa7.04□□□□□ -1.28
HDLBP-239ENST00000483086 FABP4P15090 132 aa7.04□□□□□ -1.28
HDLBP-239ENST00000483086 RPL24P83731 157 aaKnown RBP7.04□□□□□ -1.28
HDLBP-239ENST00000483086 NDUFA12Q9UI09 145 aa7.04□□□□□ -1.28
HDLBP-239ENST00000483086 SFTA2Q6UW10 78 aa7.03□□□□□ -1.28
HDLBP-239ENST00000483086 DAND5Q8N907 189 aa7.03□□□□□ -1.28
HDLBP-239ENST00000483086 TYMSOSQ8TAI1 123 aa7.03□□□□□ -1.28
HDLBP-239ENST00000483086 PLEKHB2Q96CS7 222 aa7.03□□□□□ -1.28
HDLBP-239ENST00000483086 NCR3O14931 201 aa7.02□□□□□ -1.29
HDLBP-239ENST00000483086 PRR4Q16378 134 aa7.02□□□□□ -1.29
HDLBP-239ENST00000483086 C3orf22Q8N5N4 141 aa7.02□□□□□ -1.29
HDLBP-239ENST00000483086 KRTAP4-16G5E9R7 235 aaPredicted RBP7.01□□□□□ -1.29
HDLBP-239ENST00000483086 LEPROTO15243 131 aa7.01□□□□□ -1.29
HDLBP-239ENST00000483086 EIF4EBP3O60516 100 aaPredicted RBP7.01□□□□□ -1.29
HDLBP-239ENST00000483086 MEIG1Q5JSS6 88 aa7.01□□□□□ -1.29
HDLBP-239ENST00000483086 BOD1L2Q8IYS8 172 aa7.01□□□□□ -1.29
HDLBP-239ENST00000483086 C12orf57Q99622 126 aa7.01□□□□□ -1.29
HDLBP-239ENST00000483086 SPRR1AP35321 89 aa7□□□□□ -1.29
HDLBP-239ENST00000483086 HERV-K104P63124 156 aa7□□□□□ -1.29
HDLBP-239ENST00000483086 FAM229BQ4G0N7 80 aa7□□□□□ -1.29
HDLBP-239ENST00000483086 FAT4Q6V0I7 4981 aa7□□□□□ -1.29
HDLBP-239ENST00000483086 TRBV10-3A0A0K0K1G6 114 aa6.99□□□□□ -1.29
HDLBP-239ENST00000483086 RETNLBQ9BQ08 111 aa6.99□□□□□ -1.29
HDLBP-239ENST00000483086 HIGD2AQ9BW72 106 aa6.99□□□□□ -1.29
HDLBP-239ENST00000483086 LOC107984156A0A0G2JMH3 177 aa6.98□□□□□ -1.29
HDLBP-239ENST00000483086 MYMXA0A1B0GTQ4 84 aa6.98□□□□□ -1.29
HDLBP-239ENST00000483086 J3QQQ9 107 aa6.98□□□□□ -1.29
HDLBP-239ENST00000483086 HIST1H2BKO60814 126 aa6.98□□□□□ -1.29
HDLBP-239ENST00000483086 DPM2O94777 84 aa6.98□□□□□ -1.29
HDLBP-239ENST00000483086 HIST1H2BJP06899 126 aa6.98□□□□□ -1.29
HDLBP-239ENST00000483086 SMIM6P0DI80 62 aa6.98□□□□□ -1.29
HDLBP-239ENST00000483086 HIST1H2BOP23527 126 aa6.98□□□□□ -1.29
HDLBP-239ENST00000483086 HIST1H2BBP33778 126 aa6.98□□□□□ -1.29
HDLBP-239ENST00000483086 HIST1H2BDP58876 126 aa6.98□□□□□ -1.29
HDLBP-239ENST00000483086 HIST1H2BCP62807 126 aa6.98□□□□□ -1.29
HDLBP-239ENST00000483086 HIST2H2BEQ16778 126 aa6.98□□□□□ -1.29
HDLBP-239ENST00000483086 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.98□□□□□ -1.29
HDLBP-239ENST00000483086 SOSTDC1Q6X4U4 206 aa6.98□□□□□ -1.29
HDLBP-239ENST00000483086 ARL17AQ8IVW1 177 aa6.98□□□□□ -1.29
HDLBP-239ENST00000483086 HIST1H2BHQ93079 126 aa6.98□□□□□ -1.29
HDLBP-239ENST00000483086 HIST1H2BNQ99877 126 aa6.98□□□□□ -1.29
HDLBP-239ENST00000483086 HIST1H2BMQ99879 126 aa6.98□□□□□ -1.29
HDLBP-239ENST00000483086 KCNQ1DNQ9H478 68 aa6.98□□□□□ -1.29
HDLBP-239ENST00000483086 IGKCP01834 107 aa6.97□□□□□ -1.29
HDLBP-239ENST00000483086 PLNP26678 52 aa6.97□□□□□ -1.29
HDLBP-239ENST00000483086 ADAMTSL4-AS1Q5T5F5 129 aa6.97□□□□□ -1.29
HDLBP-239ENST00000483086 SMCR5Q8TEV8 140 aa6.97□□□□□ -1.29
HDLBP-239ENST00000483086 SPRR4Q96PI1 79 aa6.97□□□□□ -1.29
HDLBP-239ENST00000483086 HSPB8Q9UJY1 196 aa6.97□□□□□ -1.29
HDLBP-239ENST00000483086 PRYO14603 147 aa6.96□□□□□ -1.3
HDLBP-239ENST00000483086 AKR1D1P51857 326 aa6.96□□□□□ -1.3
HDLBP-239ENST00000483086 LINC00304Q8N9R0 145 aa6.96□□□□□ -1.3
HDLBP-239ENST00000483086 ERC2-IT1O76042 136 aa6.95□□□□□ -1.3
HDLBP-239ENST00000483086 LINC00337Q8N6G1 96 aa6.95□□□□□ -1.3
HDLBP-239ENST00000483086 IGKV2D-26A0A0A0MRZ7 120 aa6.94□□□□□ -1.3
HDLBP-239ENST00000483086 CBY1Q9Y3M2 126 aa6.94□□□□□ -1.3
HDLBP-239ENST00000483086 A0A0J9YXY3 114 aa6.93□□□□□ -1.3
HDLBP-239ENST00000483086 B5MCH6 92 aa6.93□□□□□ -1.3
HDLBP-239ENST00000483086 SYS1-DBNDD2H3BUS1 97 aa6.93□□□□□ -1.3
HDLBP-239ENST00000483086 NPC2P61916 151 aa6.93□□□□□ -1.3
HDLBP-239ENST00000483086 LITAFQ99732 161 aa6.93□□□□□ -1.3
HDLBP-239ENST00000483086 Q9BRP9 147 aa6.93□□□□□ -1.3
HDLBP-239ENST00000483086 E9PLD3 99 aa6.92□□□□□ -1.3
HDLBP-239ENST00000483086 LGALS3P17931 250 aaKnown RBP6.92□□□□□ -1.3
HDLBP-239ENST00000483086 MAP1LC3CQ9BXW4 147 aa6.92□□□□□ -1.3
HDLBP-239ENST00000483086 TTTY13Q9BZ97 58 aa6.92□□□□□ -1.3
HDLBP-239ENST00000483086 PPDPFQ9H3Y8 114 aa6.92□□□□□ -1.3
HDLBP-239ENST00000483086 LINC00587B1AMM8 73 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms