RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-211ENST00000481154 LCE6AA0A183 80 aa1.47□□□□□ -2.17
PTPN12-211ENST00000481154 RPL38P63173 70 aaKnown RBP1.47□□□□□ -2.17
PTPN12-211ENST00000481154 LRP6O75581 1613 aa1.47□□□□□ -2.17
PTPN12-211ENST00000481154 ALKQ9UM73 1620 aa1.47□□□□□ -2.17
PTPN12-211ENST00000481154 FREM1Q5H8C1 2179 aa1.47□□□□□ -2.17
PTPN12-211ENST00000481154 ALPK2Q86TB3 2170 aa1.47□□□□□ -2.17
PTPN12-211ENST00000481154 NWD1Q149M9 1564 aa1.47□□□□□ -2.17
PTPN12-211ENST00000481154 POLR1AO95602 1720 aaPredicted RBP1.46□□□□□ -2.18
PTPN12-211ENST00000481154 TJP1Q07157 1748 aa1.46□□□□□ -2.18
PTPN12-211ENST00000481154 TRPM2O94759 1503 aa1.46□□□□□ -2.18
PTPN12-211ENST00000481154 RREB1Q92766 1687 aa1.46□□□□□ -2.18
PTPN12-211ENST00000481154 A0A087WTM6 91 aa1.46□□□□□ -2.18
PTPN12-211ENST00000481154 A0A1B0GU69 56 aa1.46□□□□□ -2.18
PTPN12-211ENST00000481154 H0YGX0 51 aa1.46□□□□□ -2.18
PTPN12-211ENST00000481154 I3L3M4 83 aa1.46□□□□□ -2.18
PTPN12-211ENST00000481154 COA5Q86WW8 74 aa1.46□□□□□ -2.18
PTPN12-211ENST00000481154 INTS1Q8N201 2190 aaKnown RBP1.46□□□□□ -2.18
PTPN12-211ENST00000481154 CICQ96RK0 1608 aaPredicted RBP1.46□□□□□ -2.18
PTPN12-211ENST00000481154 EIF2AK4Q9P2K8 1649 aaKnown RBP1.46□□□□□ -2.18
PTPN12-211ENST00000481154 ANKRD36CQ5JPF3 1778 aa1.46□□□□□ -2.18
PTPN12-211ENST00000481154 DLEC1Q9Y238 1755 aa1.46□□□□□ -2.18
PTPN12-211ENST00000481154 CEP192Q8TEP8 1941 aa1.45□□□□□ -2.18
PTPN12-211ENST00000481154 NCOA6Q14686 2063 aaPredicted RBP1.45□□□□□ -2.18
PTPN12-211ENST00000481154 M0R1W7 72 aa1.45□□□□□ -2.18
PTPN12-211ENST00000481154 NDUFA4O00483 81 aa1.45□□□□□ -2.18
PTPN12-211ENST00000481154 NCR3O14931 201 aa1.45□□□□□ -2.18
PTPN12-211ENST00000481154 HAMPP81172 84 aa1.45□□□□□ -2.18
PTPN12-211ENST00000481154 Q6ZQY7 126 aa1.45□□□□□ -2.18
PTPN12-211ENST00000481154 Q96NJ1 140 aa1.45□□□□□ -2.18
PTPN12-211ENST00000481154 TIMM8BQ9Y5J9 83 aaPredicted RBP1.45□□□□□ -2.18
PTPN12-211ENST00000481154 ERCC6L2Q5T890 1561 aa1.45□□□□□ -2.18
PTPN12-211ENST00000481154 RICTORQ6R327 1708 aa1.45□□□□□ -2.18
PTPN12-211ENST00000481154 LINC01546A6NGU7 62 aa1.44□□□□□ -2.18
PTPN12-211ENST00000481154 SPINK4O60575 86 aa1.44□□□□□ -2.18
PTPN12-211ENST00000481154 MRPL33O75394 65 aaKnown RBP1.44□□□□□ -2.18
PTPN12-211ENST00000481154 ARL14EPLP0DKL9 152 aa1.44□□□□□ -2.18
PTPN12-211ENST00000481154 DEFB114Q30KQ6 69 aa1.44□□□□□ -2.18
PTPN12-211ENST00000481154 LINC00472Q9H8W2 130 aa1.44□□□□□ -2.18
PTPN12-211ENST00000481154 NHSL1Q5SYE7 1610 aa1.44□□□□□ -2.18
PTPN12-211ENST00000481154 TIAM2Q8IVF5 1701 aa1.43□□□□□ -2.18
PTPN12-211ENST00000481154 ABCC8Q09428 1581 aa1.43□□□□□ -2.18
PTPN12-211ENST00000481154 SAMD9Q5K651 1589 aa1.43□□□□□ -2.18
PTPN12-211ENST00000481154 C3P01024 1663 aa1.43□□□□□ -2.18
PTPN12-211ENST00000481154 ETDCA0A1B0GVM5 59 aa1.43□□□□□ -2.18
PTPN12-211ENST00000481154 IGIPA6NJ69 53 aa1.43□□□□□ -2.18
PTPN12-211ENST00000481154 PIN1P1O15428 100 aa1.43□□□□□ -2.18
PTPN12-211ENST00000481154 COX7BP24311 80 aa1.43□□□□□ -2.18
PTPN12-211ENST00000481154 FXYD6P3P58550 94 aa1.43□□□□□ -2.18
PTPN12-211ENST00000481154 PKD1L3Q7Z443 1732 aa1.43□□□□□ -2.18
PTPN12-211ENST00000481154 FMN2Q9NZ56 1722 aa1.43□□□□□ -2.18
PTPN12-211ENST00000481154 COL14A1Q05707 1796 aaKnown RBP1.42□□□□□ -2.18
PTPN12-211ENST00000481154 LINC00959A0A1B0GUT2 108 aa1.42□□□□□ -2.18
PTPN12-211ENST00000481154 COX6B1P14854 86 aa1.42□□□□□ -2.18
PTPN12-211ENST00000481154 PLAC4Q8WY50 150 aa1.42□□□□□ -2.18
PTPN12-211ENST00000481154 CCL19Q99731 98 aa1.42□□□□□ -2.18
PTPN12-211ENST00000481154 TMEM167BQ9NRX6 74 aa1.42□□□□□ -2.18
PTPN12-211ENST00000481154 COL6A6A6NMZ7 2263 aa1.42□□□□□ -2.18
PTPN12-211ENST00000481154 FLG2Q5D862 2391 aaPredicted RBP1.42□□□□□ -2.18
PTPN12-211ENST00000481154 TULP4Q9NRJ4 1543 aa1.41□□□□□ -2.18
PTPN12-211ENST00000481154 PHRF1Q9P1Y6 1649 aaKnown RBP1.41□□□□□ -2.18
PTPN12-211ENST00000481154 NDUFA3O95167 84 aa1.41□□□□□ -2.18
PTPN12-211ENST00000481154 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.41□□□□□ -2.18
PTPN12-211ENST00000481154 Q6ZRX8 168 aa1.41□□□□□ -2.18
PTPN12-211ENST00000481154 SSBP3-AS1Q7Z2R9 100 aa1.41□□□□□ -2.18
PTPN12-211ENST00000481154 SMIM11BQ8TCY0 68 aa1.41□□□□□ -2.18
PTPN12-211ENST00000481154 BRWD1Q9NSI6 2320 aa1.41□□□□□ -2.18
PTPN12-211ENST00000481154 COL4A5P29400 1685 aa1.41□□□□□ -2.18
PTPN12-211ENST00000481154 SCN7AQ01118 1682 aa1.41□□□□□ -2.18
PTPN12-211ENST00000481154 BCORQ6W2J9 1755 aa1.41□□□□□ -2.18
PTPN12-211ENST00000481154 PAPPA2Q9BXP8 1791 aa1.41□□□□□ -2.18
PTPN12-211ENST00000481154 ATP7AQ04656 1500 aa1.4□□□□□ -2.18
PTPN12-211ENST00000481154 C5P01031 1676 aa1.4□□□□□ -2.19
PTPN12-211ENST00000481154 FAM208AQ9UK61 1670 aaKnown RBP1.4□□□□□ -2.19
PTPN12-211ENST00000481154 C10orf99Q6UWK7 81 aa1.4□□□□□ -2.19
PTPN12-211ENST00000481154 KCNQ1DNQ9H478 68 aa1.4□□□□□ -2.19
PTPN12-211ENST00000481154 TNCP24821 2201 aa1.4□□□□□ -2.19
PTPN12-211ENST00000481154 CPSF4LA6NMK7 179 aaKnown RBP1.39□□□□□ -2.19
PTPN12-211ENST00000481154 ANGP03950 147 aaKnown RBP1.39□□□□□ -2.19
PTPN12-211ENST00000481154 SPINK13Q1W4C9 94 aa1.39□□□□□ -2.19
PTPN12-211ENST00000481154 PARP4Q9UKK3 1724 aaKnown RBP1.38□□□□□ -2.19
PTPN12-211ENST00000481154 NRXN3Q9Y4C0 1643 aa1.38□□□□□ -2.19
PTPN12-211ENST00000481154 DEFB131BA0A096LNP1 70 aa1.38□□□□□ -2.19
PTPN12-211ENST00000481154 SPTY2D1-AS1A0A0U1RR47 76 aa1.38□□□□□ -2.19
PTPN12-211ENST00000481154 LRRC37A2A6NM11 1700 aa1.37□□□□□ -2.19
PTPN12-211ENST00000481154 LY75O60449 1722 aa1.37□□□□□ -2.19
PTPN12-211ENST00000481154 SAMD9LQ8IVG5 1584 aa1.37□□□□□ -2.19
PTPN12-211ENST00000481154 A0A096LNT2 108 aa1.36□□□□□ -2.19
PTPN12-211ENST00000481154 GVQW2A0A096LPI5 108 aaPredicted RBP1.36□□□□□ -2.19
PTPN12-211ENST00000481154 LY6G6CO95867 125 aa1.36□□□□□ -2.19
PTPN12-211ENST00000481154 LYNX1P0DP58 116 aa1.36□□□□□ -2.19
PTPN12-211ENST00000481154 QSER1Q2KHR3 1735 aa1.36□□□□□ -2.19
PTPN12-211ENST00000481154 CRIPTQ9P021 101 aa1.36□□□□□ -2.19
PTPN12-211ENST00000481154 MED13LQ71F56 2210 aa1.36□□□□□ -2.19
PTPN12-211ENST00000481154 DEPDC5O75140 1603 aa1.36□□□□□ -2.19
PTPN12-211ENST00000481154 SLIT1O75093 1534 aa1.35□□□□□ -2.19
PTPN12-211ENST00000481154 DDX60Q8IY21 1712 aaKnown RBP1.35□□□□□ -2.19
PTPN12-211ENST00000481154 DOT1LQ8TEK3 1739 aa1.35□□□□□ -2.19
PTPN12-211ENST00000481154 ZNF831Q5JPB2 1677 aa1.35□□□□□ -2.19
PTPN12-211ENST00000481154 NRAPQ86VF7 1730 aa1.35□□□□□ -2.19
PTPN12-211ENST00000481154 MROH2BQ7Z745 1585 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms