RNA–Protein interactions for RNA: ENST00000481004.1

LINC02040-201, Transcript of long intergenic non-protein coding RNA 2040, humanhuman

TSL 5 BASIC

Gene LINC02040, Length 556 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02040-201ENST00000481004 VCX2Q9H322 139 aa3.31□□□□□ -1.88
LINC02040-201ENST00000481004 XAGE1AQ9HD64 81 aa3.31□□□□□ -1.88
LINC02040-201ENST00000481004 NXT2Q9NPJ8 142 aaKnown RBP3.31□□□□□ -1.88
LINC02040-201ENST00000481004 TOMM7Q9P0U1 55 aa3.31□□□□□ -1.88
LINC02040-201ENST00000481004 C5orf52A6NGY3 159 aa3.3□□□□□ -1.88
LINC02040-201ENST00000481004 K7EMI3 77 aa3.3□□□□□ -1.88
LINC02040-201ENST00000481004 SCGB1D1O95968 90 aa3.3□□□□□ -1.88
LINC02040-201ENST00000481004 Q6ZN92 141 aa3.3□□□□□ -1.88
LINC02040-201ENST00000481004 ERASQ7Z444 233 aa3.3□□□□□ -1.88
LINC02040-201ENST00000481004 Q8IZM0 81 aa3.3□□□□□ -1.88
LINC02040-201ENST00000481004 Q8NDZ9 215 aa3.3□□□□□ -1.88
LINC02040-201ENST00000481004 LITAFQ99732 161 aa3.3□□□□□ -1.88
LINC02040-201ENST00000481004 C2orf88Q9BSF0 95 aa3.3□□□□□ -1.88
LINC02040-201ENST00000481004 GNB1LQ9BYB4 327 aa3.3□□□□□ -1.88
LINC02040-201ENST00000481004 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
LINC02040-201ENST00000481004 CST9LQ9H4G1 147 aa3.3□□□□□ -1.88
LINC02040-201ENST00000481004 SPINK8P0C7L1 97 aa3.29□□□□□ -1.88
LINC02040-201ENST00000481004 S100PP25815 95 aa3.29□□□□□ -1.88
LINC02040-201ENST00000481004 RAB5BP61020 215 aa3.29□□□□□ -1.88
LINC02040-201ENST00000481004 HERVK_113P63121 156 aa3.29□□□□□ -1.88
LINC02040-201ENST00000481004 PMCHL1Q16048 86 aa3.29□□□□□ -1.88
LINC02040-201ENST00000481004 COX19Q49B96 90 aa3.29□□□□□ -1.88
LINC02040-201ENST00000481004 SCGB3A1Q96QR1 104 aa3.29□□□□□ -1.88
LINC02040-201ENST00000481004 C22orf24Q9Y442 160 aa3.29□□□□□ -1.88
LINC02040-201ENST00000481004 MUC2Q02817 5179 aa3.28□□□□□ -1.88
LINC02040-201ENST00000481004 TINCRA0A1B0GVN0 87 aa3.28□□□□□ -1.88
LINC02040-201ENST00000481004 F8VRH5 84 aa3.28□□□□□ -1.88
LINC02040-201ENST00000481004 HIST1H2BKO60814 126 aa3.28□□□□□ -1.88
LINC02040-201ENST00000481004 HIST1H2BJP06899 126 aa3.28□□□□□ -1.88
LINC02040-201ENST00000481004 HIST1H2BOP23527 126 aa3.28□□□□□ -1.88
LINC02040-201ENST00000481004 HIST1H2BBP33778 126 aa3.28□□□□□ -1.88
LINC02040-201ENST00000481004 HIST1H2BDP58876 126 aa3.28□□□□□ -1.88
LINC02040-201ENST00000481004 CKS1BP61024 79 aa3.28□□□□□ -1.88
LINC02040-201ENST00000481004 HIST1H2BCP62807 126 aa3.28□□□□□ -1.88
LINC02040-201ENST00000481004 UBE2V1Q13404 147 aa3.28□□□□□ -1.88
LINC02040-201ENST00000481004 HIST2H2BEQ16778 126 aa3.28□□□□□ -1.88
LINC02040-201ENST00000481004 C6orf226Q5I0X4 101 aa3.28□□□□□ -1.88
LINC02040-201ENST00000481004 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.28□□□□□ -1.88
LINC02040-201ENST00000481004 GAGE2AQ6NT46 116 aa3.28□□□□□ -1.88
LINC02040-201ENST00000481004 COX7B2Q8TF08 81 aa3.28□□□□□ -1.88
LINC02040-201ENST00000481004 HIST1H2BHQ93079 126 aa3.28□□□□□ -1.88
LINC02040-201ENST00000481004 DIRC1Q969H9 104 aa3.28□□□□□ -1.88
LINC02040-201ENST00000481004 PACRGQ96M98 296 aaPredicted RBP3.28□□□□□ -1.88
LINC02040-201ENST00000481004 HIST1H2BNQ99877 126 aa3.28□□□□□ -1.88
LINC02040-201ENST00000481004 HIST1H2BMQ99879 126 aa3.28□□□□□ -1.88
LINC02040-201ENST00000481004 A0A087X002 238 aa3.27□□□□□ -1.89
LINC02040-201ENST00000481004 RPL37AP8A6NKH3 93 aa3.27□□□□□ -1.89
LINC02040-201ENST00000481004 TRGC2P03986 189 aa3.27□□□□□ -1.89
LINC02040-201ENST00000481004 UBE2BP63146 152 aa3.27□□□□□ -1.89
LINC02040-201ENST00000481004 FABP9Q0Z7S8 132 aa3.27□□□□□ -1.89
LINC02040-201ENST00000481004 PDZD11Q5EBL8 140 aa3.27□□□□□ -1.89
LINC02040-201ENST00000481004 KRTAP13-1Q8IUC0 172 aa3.27□□□□□ -1.89
LINC02040-201ENST00000481004 C18orf32Q8TCD1 76 aa3.27□□□□□ -1.89
LINC02040-201ENST00000481004 LINC00167Q96N53 147 aa3.27□□□□□ -1.89
LINC02040-201ENST00000481004 GEMIN7Q9H840 131 aaKnown RBP3.27□□□□□ -1.89
LINC02040-201ENST00000481004 C11orf86A6NJI1 115 aa3.26□□□□□ -1.89
LINC02040-201ENST00000481004 ZNF861PO60384 105 aa3.26□□□□□ -1.89
LINC02040-201ENST00000481004 IGLC3P0DOY3 106 aa3.26□□□□□ -1.89
LINC02040-201ENST00000481004 ZNF22P17026 224 aaPredicted RBP3.26□□□□□ -1.89
LINC02040-201ENST00000481004 PMVKQ15126 192 aa3.26□□□□□ -1.89
LINC02040-201ENST00000481004 MRPL55Q7Z7F7 128 aaKnown RBP3.26□□□□□ -1.89
LINC02040-201ENST00000481004 ANAPC11Q9NYG5 84 aa3.26□□□□□ -1.89
LINC02040-201ENST00000481004 IGLV1-50A0A075B6I6 118 aa3.25□□□□□ -1.89
LINC02040-201ENST00000481004 SNRPEP62304 92 aaKnown RBP3.25□□□□□ -1.89
LINC02040-201ENST00000481004 SEC11AP67812 179 aa3.25□□□□□ -1.89
LINC02040-201ENST00000481004 KRTAP13-2Q52LG2 175 aa3.25□□□□□ -1.89
LINC02040-201ENST00000481004 FA2HQ7L5A8 372 aa3.25□□□□□ -1.89
LINC02040-201ENST00000481004 HIST3H2BBQ8N257 126 aa3.25□□□□□ -1.89
LINC02040-201ENST00000481004 TP73-AS1Q9UF72 201 aa3.25□□□□□ -1.89
LINC02040-201ENST00000481004 BCE1O60756 84 aa3.24□□□□□ -1.89
LINC02040-201ENST00000481004 LINC00614P0C842 121 aa3.24□□□□□ -1.89
LINC02040-201ENST00000481004 SMIM6P0DI80 62 aa3.24□□□□□ -1.89
LINC02040-201ENST00000481004 VPREB1P12018 145 aa3.24□□□□□ -1.89
LINC02040-201ENST00000481004 G0S2P27469 103 aa3.24□□□□□ -1.89
LINC02040-201ENST00000481004 PFN2P35080 140 aa3.24□□□□□ -1.89
LINC02040-201ENST00000481004 CXCL5P42830 114 aa3.24□□□□□ -1.89
LINC02040-201ENST00000481004 LINC00518Q8N0U6 118 aa3.24□□□□□ -1.89
LINC02040-201ENST00000481004 ZNF625Q96I27 306 aaPredicted RBP3.24□□□□□ -1.89
LINC02040-201ENST00000481004 TRAPPC1Q9Y5R8 145 aa3.24□□□□□ -1.89
LINC02040-201ENST00000481004 IGKV2-28A0A075B6P5 120 aa3.23□□□□□ -1.89
LINC02040-201ENST00000481004 TMEM238C9JI98 176 aa3.23□□□□□ -1.89
LINC02040-201ENST00000481004 NUPR1O60356 82 aa3.23□□□□□ -1.89
LINC02040-201ENST00000481004 IGKV2D-28P01615 120 aa3.23□□□□□ -1.89
LINC02040-201ENST00000481004 HBDP02042 147 aa3.23□□□□□ -1.89
LINC02040-201ENST00000481004 S100A6P06703 90 aa3.23□□□□□ -1.89
LINC02040-201ENST00000481004 NDUFA6P56556 154 aa3.23□□□□□ -1.89
LINC02040-201ENST00000481004 LBHQ53QV2 105 aaPredicted RBP3.23□□□□□ -1.89
LINC02040-201ENST00000481004 SND1-IT1Q9HBX3 110 aa3.23□□□□□ -1.89
LINC02040-201ENST00000481004 M0R378 163 aa3.22□□□□□ -1.89
LINC02040-201ENST00000481004 PRLHP81277 87 aa3.22□□□□□ -1.89
LINC02040-201ENST00000481004 NOTCH2NLQ7Z3S9 236 aa3.22□□□□□ -1.89
LINC02040-201ENST00000481004 BAGE3Q86Y29 109 aa3.22□□□□□ -1.89
LINC02040-201ENST00000481004 HIST1H2BLQ99880 126 aa3.22□□□□□ -1.89
LINC02040-201ENST00000481004 ERG28Q9UKR5 140 aa3.22□□□□□ -1.89
LINC02040-201ENST00000481004 TMEM223A0PJW6 202 aa3.21□□□□□ -1.9
LINC02040-201ENST00000481004 LINC01549A6NIU2 74 aa3.21□□□□□ -1.9
LINC02040-201ENST00000481004 H3BRM9 83 aa3.21□□□□□ -1.9
LINC02040-201ENST00000481004 ATP5LO75964 103 aa3.21□□□□□ -1.9
LINC02040-201ENST00000481004 TSPAN13O95857 204 aa3.21□□□□□ -1.9
LINC02040-201ENST00000481004 RPL28P46779 137 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms