RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 TAX1BP3O14907 124 aa6.88□□□□□ -1.31
LINC00173-203ENST00000480237 LECT2O14960 151 aa6.88□□□□□ -1.31
LINC00173-203ENST00000480237 SOSTDC1Q6X4U4 206 aa6.88□□□□□ -1.31
LINC00173-203ENST00000480237 C6orf48Q9UBA6 75 aa6.88□□□□□ -1.31
LINC00173-203ENST00000480237 A0A1B0GWB2 263 aa6.87□□□□□ -1.31
LINC00173-203ENST00000480237 LY6G6CO95867 125 aa6.87□□□□□ -1.31
LINC00173-203ENST00000480237 RNF151Q2KHN1 245 aa6.87□□□□□ -1.31
LINC00173-203ENST00000480237 Q6ZRU5 148 aa6.87□□□□□ -1.31
LINC00173-203ENST00000480237 A0A0B4J2C4 111 aa6.86□□□□□ -1.31
LINC00173-203ENST00000480237 CFC1BP0CG36 223 aa6.86□□□□□ -1.31
LINC00173-203ENST00000480237 CFC1P0CG37 223 aa6.86□□□□□ -1.31
LINC00173-203ENST00000480237 SYCNQ0VAF6 134 aa6.86□□□□□ -1.31
LINC00173-203ENST00000480237 CARD19Q96LW7 228 aa6.86□□□□□ -1.31
LINC00173-203ENST00000480237 PPDPFQ9H3Y8 114 aa6.86□□□□□ -1.31
LINC00173-203ENST00000480237 LINC00476Q8WZB0 136 aa6.86□□□□□ -1.31
LINC00173-203ENST00000480237 NAA38Q9BRA0 125 aaKnown RBP6.85□□□□□ -1.31
LINC00173-203ENST00000480237 SND1-IT1Q9HBX3 110 aa6.85□□□□□ -1.31
LINC00173-203ENST00000480237 PRO1854Q9UHT4 67 aa6.85□□□□□ -1.31
LINC00173-203ENST00000480237 H3BUT2 72 aa6.84□□□□□ -1.31
LINC00173-203ENST00000480237 Q1RN00 199 aa6.84□□□□□ -1.31
LINC00173-203ENST00000480237 C14orf177Q52M58 125 aa6.84□□□□□ -1.31
LINC00173-203ENST00000480237 KMT2AQ03164 3969 aa6.84□□□□□ -1.31
LINC00173-203ENST00000480237 H7C2G1 150 aa6.83□□□□□ -1.32
LINC00173-203ENST00000480237 WFDC2Q14508 124 aa6.83□□□□□ -1.32
LINC00173-203ENST00000480237 KRTAP9-7A8MTY7 169 aa6.82□□□□□ -1.32
LINC00173-203ENST00000480237 TSPAN13O95857 204 aa6.82□□□□□ -1.32
LINC00173-203ENST00000480237 RPL13AP40429 203 aaKnown RBP6.82□□□□□ -1.32
LINC00173-203ENST00000480237 NDUFC2-KCTD14E9PQ53 114 aa6.82□□□□□ -1.32
LINC00173-203ENST00000480237 Q6ZR54 194 aa6.82□□□□□ -1.32
LINC00173-203ENST00000480237 Q6ZRN7 208 aaPredicted RBP6.82□□□□□ -1.32
LINC00173-203ENST00000480237 RPL18AQ02543 176 aaKnown RBP6.81□□□□□ -1.32
LINC00173-203ENST00000480237 VAMP3Q15836 100 aa6.81□□□□□ -1.32
LINC00173-203ENST00000480237 FRAS1Q86XX4 4008 aa6.8□□□□□ -1.32
LINC00173-203ENST00000480237 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.8□□□□□ -1.32
LINC00173-203ENST00000480237 KRTAP4-8A0A0G2JLE6 195 aa6.8□□□□□ -1.32
LINC00173-203ENST00000480237 LOC107984156A0A0G2JMH3 177 aa6.8□□□□□ -1.32
LINC00173-203ENST00000480237 A0A1W2PPM0 123 aa6.8□□□□□ -1.32
LINC00173-203ENST00000480237 FABP2P12104 132 aa6.8□□□□□ -1.32
LINC00173-203ENST00000480237 GAGE2EQ4V326 116 aa6.8□□□□□ -1.32
LINC00173-203ENST00000480237 ARL17AQ8IVW1 177 aa6.8□□□□□ -1.32
LINC00173-203ENST00000480237 XAGE1AQ9HD64 81 aa6.8□□□□□ -1.32
LINC00173-203ENST00000480237 GAGE2DQ9UEU5 116 aa6.8□□□□□ -1.32
LINC00173-203ENST00000480237 TRAV13-2A0A0B4J235 113 aa6.79□□□□□ -1.32
LINC00173-203ENST00000480237 SLPIP03973 132 aa6.79□□□□□ -1.32
LINC00173-203ENST00000480237 PSMB2P49721 201 aa6.79□□□□□ -1.32
LINC00173-203ENST00000480237 IGKV2-28A0A075B6P5 120 aa6.78□□□□□ -1.32
LINC00173-203ENST00000480237 LRCOL1A6NCL2 159 aa6.78□□□□□ -1.32
LINC00173-203ENST00000480237 NDUFC2O95298 119 aa6.78□□□□□ -1.32
LINC00173-203ENST00000480237 IGKV2D-28P01615 120 aa6.78□□□□□ -1.32
LINC00173-203ENST00000480237 CNBPP62633 177 aaKnown RBP6.78□□□□□ -1.32
LINC00173-203ENST00000480237 C1orf134Q5TEV5 83 aa6.78□□□□□ -1.32
LINC00173-203ENST00000480237 LYRM7Q5U5X0 104 aa6.78□□□□□ -1.32
LINC00173-203ENST00000480237 LINC00337Q8N6G1 96 aa6.78□□□□□ -1.32
LINC00173-203ENST00000480237 LOC107984640A0A0U1RRK4 108 aa6.78□□□□□ -1.32
LINC00173-203ENST00000480237 NCR3O14931 201 aa6.78□□□□□ -1.32
LINC00173-203ENST00000480237 TLX1NBP0CAT3 122 aa6.78□□□□□ -1.32
LINC00173-203ENST00000480237 Q6ZRP5 223 aa6.78□□□□□ -1.32
LINC00173-203ENST00000480237 OR13C6PQ8NH95 151 aa6.78□□□□□ -1.32
LINC00173-203ENST00000480237 DNAH2Q9P225 4427 aa6.77□□□□□ -1.33
LINC00173-203ENST00000480237 SPCS1Q9Y6A9 102 aa6.77□□□□□ -1.33
LINC00173-203ENST00000480237 HECTD4Q9Y4D8 3996 aa6.76□□□□□ -1.33
LINC00173-203ENST00000480237 DNAH17Q9UFH2 4485 aa6.76□□□□□ -1.33
LINC00173-203ENST00000480237 A0A087WTM6 91 aa6.75□□□□□ -1.33
LINC00173-203ENST00000480237 TRIAP1O43715 76 aa6.75□□□□□ -1.33
LINC00173-203ENST00000480237 SCGB1C2P0DMR2 95 aa6.75□□□□□ -1.33
LINC00173-203ENST00000480237 PRR3P79522 188 aaKnown RBP6.75□□□□□ -1.33
LINC00173-203ENST00000480237 GAGE2BQ13066 116 aa6.75□□□□□ -1.33
LINC00173-203ENST00000480237 GTF2H5Q6ZYL4 71 aa6.75□□□□□ -1.33
LINC00173-203ENST00000480237 Q8N814 137 aa6.75□□□□□ -1.33
LINC00173-203ENST00000480237 Q8NDZ9 215 aa6.75□□□□□ -1.33
LINC00173-203ENST00000480237 GAGE10A6NGK3 116 aa6.74□□□□□ -1.33
LINC00173-203ENST00000480237 K7EP34 96 aa6.74□□□□□ -1.33
LINC00173-203ENST00000480237 S100A7L2Q5SY68 101 aa6.74□□□□□ -1.33
LINC00173-203ENST00000480237 C9orf129Q5T035 196 aaKnown RBP6.74□□□□□ -1.33
LINC00173-203ENST00000480237 PKIGQ9Y2B9 76 aa6.74□□□□□ -1.33
LINC00173-203ENST00000480237 COX6CP09669 75 aa6.74□□□□□ -1.33
LINC00173-203ENST00000480237 UBE2V1Q13404 147 aa6.74□□□□□ -1.33
LINC00173-203ENST00000480237 TRBV10-2A0A0K0K1G8 114 aa6.73□□□□□ -1.33
LINC00173-203ENST00000480237 VPREB1P12018 145 aa6.73□□□□□ -1.33
LINC00173-203ENST00000480237 LCE1DQ5T752 114 aa6.73□□□□□ -1.33
LINC00173-203ENST00000480237 NKAPP1Q8N9T2 125 aa6.73□□□□□ -1.33
LINC00173-203ENST00000480237 TMEM126AQ9H061 195 aa6.73□□□□□ -1.33
LINC00173-203ENST00000480237 A0A096LNI7 61 aa6.71□□□□□ -1.34
LINC00173-203ENST00000480237 IGKV2-24A0A0C4DH68 120 aa6.71□□□□□ -1.34
LINC00173-203ENST00000480237 RPL28P46779 137 aaKnown RBP6.71□□□□□ -1.34
LINC00173-203ENST00000480237 C9orf163Q8N9P6 203 aa6.71□□□□□ -1.34
LINC00173-203ENST00000480237 SMIM11BQ8TCY0 68 aa6.71□□□□□ -1.34
LINC00173-203ENST00000480237 C16orf90A8MZG2 172 aa6.7□□□□□ -1.34
LINC00173-203ENST00000480237 M0R378 163 aa6.7□□□□□ -1.34
LINC00173-203ENST00000480237 TCL1BO95988 128 aa6.7□□□□□ -1.34
LINC00173-203ENST00000480237 SERTAD4-AS1Q5TG53 156 aa6.7□□□□□ -1.34
LINC00173-203ENST00000480237 HYDINQ4G0P3 5121 aa6.7□□□□□ -1.34
LINC00173-203ENST00000480237 SACSQ9NZJ4 4579 aa6.7□□□□□ -1.34
LINC00173-203ENST00000480237 TRBV20-1A0A075B6N2 111 aa6.69□□□□□ -1.34
LINC00173-203ENST00000480237 TRBV10-3A0A0K0K1G6 114 aa6.69□□□□□ -1.34
LINC00173-203ENST00000480237 FAM19A5Q7Z5A7 132 aaPredicted RBP6.69□□□□□ -1.34
LINC00173-203ENST00000480237 LCE6AA0A183 80 aa6.69□□□□□ -1.34
LINC00173-203ENST00000480237 FAM168BA1KXE4 195 aa6.69□□□□□ -1.34
LINC00173-203ENST00000480237 RTL8CO15255 209 aa6.69□□□□□ -1.34
LINC00173-203ENST00000480237 ATXN8Q156A1 80 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms