RNA–Protein interactions for RNA: ENST00000480181.1

CLIC3-202, Transcript of chloride intracellular channel 3, humanhuman

TSL 3

Gene CLIC3, Length 794 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-202ENST00000480181 DPM2O94777 84 aa12.42□□□□□ -0.42
CLIC3-202ENST00000480181 PLNP26678 52 aa12.42□□□□□ -0.42
CLIC3-202ENST00000480181 MAP1LC3CQ9BXW4 147 aa12.42□□□□□ -0.42
CLIC3-202ENST00000480181 MUC2Q02817 5179 aa12.41□□□□□ -0.42
CLIC3-202ENST00000480181 SYS1-DBNDD2H3BUS1 97 aa12.41□□□□□ -0.42
CLIC3-202ENST00000480181 SFTA2Q6UW10 78 aa12.41□□□□□ -0.42
CLIC3-202ENST00000480181 TSPEAR-AS2P59090 65 aa12.4□□□□□ -0.42
CLIC3-202ENST00000480181 ERG28Q9UKR5 140 aa12.4□□□□□ -0.42
CLIC3-202ENST00000480181 IGKCP01834 107 aa12.39□□□□□ -0.43
CLIC3-202ENST00000480181 LINC01545Q5VT33 79 aa12.39□□□□□ -0.43
CLIC3-202ENST00000480181 ZNF861PO60384 105 aa12.38□□□□□ -0.43
CLIC3-202ENST00000480181 COX17Q14061 63 aa12.38□□□□□ -0.43
CLIC3-202ENST00000480181 C3orf79P0CE67 100 aa12.36□□□□□ -0.43
CLIC3-202ENST00000480181 PFN2P35080 140 aa12.36□□□□□ -0.43
CLIC3-202ENST00000480181 LBHQ53QV2 105 aaPredicted RBP12.36□□□□□ -0.43
CLIC3-202ENST00000480181 C22orf24Q9Y442 160 aa12.36□□□□□ -0.43
CLIC3-202ENST00000480181 IGLV5-37A0A075B6J1 123 aa12.35□□□□□ -0.43
CLIC3-202ENST00000480181 LEPROTO15243 131 aa12.35□□□□□ -0.43
CLIC3-202ENST00000480181 PET117Q6UWS5 81 aa12.35□□□□□ -0.43
CLIC3-202ENST00000480181 SND1-IT1Q9HBX3 110 aa12.35□□□□□ -0.43
CLIC3-202ENST00000480181 TP73-AS1Q9UF72 201 aa12.35□□□□□ -0.43
CLIC3-202ENST00000480181 NDUFA12Q9UI09 145 aa12.34□□□□□ -0.43
CLIC3-202ENST00000480181 Q8NDZ9 215 aa12.33□□□□□ -0.44
CLIC3-202ENST00000480181 PLEKHB2Q96CS7 222 aa12.32□□□□□ -0.44
CLIC3-202ENST00000480181 J3QQQ9 107 aa12.31□□□□□ -0.44
CLIC3-202ENST00000480181 HERV-K104P63124 156 aa12.31□□□□□ -0.44
CLIC3-202ENST00000480181 E9PLD3 99 aa12.3□□□□□ -0.44
CLIC3-202ENST00000480181 VPREB1P12018 145 aa12.3□□□□□ -0.44
CLIC3-202ENST00000480181 HERVK_113P61574 105 aa12.3□□□□□ -0.44
CLIC3-202ENST00000480181 HIST3H2BBQ8N257 126 aa12.3□□□□□ -0.44
CLIC3-202ENST00000480181 RPL28P46779 137 aaKnown RBP12.29□□□□□ -0.44
CLIC3-202ENST00000480181 MRPL55Q7Z7F7 128 aaKnown RBP12.29□□□□□ -0.44
CLIC3-202ENST00000480181 MYMXA0A1B0GTQ4 84 aa12.28□□□□□ -0.44
CLIC3-202ENST00000480181 SMIM13P0DJ93 91 aa12.28□□□□□ -0.44
CLIC3-202ENST00000480181 TSPAN13O95857 204 aa12.27□□□□□ -0.45
CLIC3-202ENST00000480181 KRTDAPP60985 99 aa12.27□□□□□ -0.45
CLIC3-202ENST00000480181 CRYGAP11844 174 aa12.26□□□□□ -0.45
CLIC3-202ENST00000480181 NMUP48645 174 aa12.26□□□□□ -0.45
CLIC3-202ENST00000480181 LINC00158P58513 81 aa12.26□□□□□ -0.45
CLIC3-202ENST00000480181 LINC00167Q96N53 147 aa12.26□□□□□ -0.45
CLIC3-202ENST00000480181 HIST1H2BLQ99880 126 aa12.26□□□□□ -0.45
CLIC3-202ENST00000480181 A0A0U1RRA0 63 aa12.25□□□□□ -0.45
CLIC3-202ENST00000480181 MIR7-3HGQ8N6C7 128 aa12.24□□□□□ -0.45
CLIC3-202ENST00000480181 TYMSOSQ8TAI1 123 aa12.24□□□□□ -0.45
CLIC3-202ENST00000480181 BCE1O60756 84 aa12.23□□□□□ -0.45
CLIC3-202ENST00000480181 MEIG1Q5JSS6 88 aa12.23□□□□□ -0.45
CLIC3-202ENST00000480181 KRTAP9-2Q9BYQ4 174 aa12.23□□□□□ -0.45
CLIC3-202ENST00000480181 IGKV2D-26A0A0A0MRZ7 120 aa12.22□□□□□ -0.45
CLIC3-202ENST00000480181 LGALS3P17931 250 aaKnown RBP12.22□□□□□ -0.45
CLIC3-202ENST00000480181 LOC107984156A0A0G2JMH3 177 aa12.21□□□□□ -0.45
CLIC3-202ENST00000480181 LINC00587B1AMM8 73 aa12.21□□□□□ -0.45
CLIC3-202ENST00000480181 ARL17AQ8IVW1 177 aa12.21□□□□□ -0.45
CLIC3-202ENST00000480181 NKAPP1Q8N9T2 125 aa12.21□□□□□ -0.45
CLIC3-202ENST00000480181 GAGE10A6NGK3 116 aa12.2□□□□□ -0.46
CLIC3-202ENST00000480181 A0A087X002 238 aa12.19□□□□□ -0.46
CLIC3-202ENST00000480181 A0A0J9YXY3 114 aa12.19□□□□□ -0.46
CLIC3-202ENST00000480181 RPL37AP8A6NKH3 93 aa12.19□□□□□ -0.46
CLIC3-202ENST00000480181 RPL24P83731 157 aaKnown RBP12.19□□□□□ -0.46
CLIC3-202ENST00000480181 C20orf202A1L168 122 aa12.17□□□□□ -0.46
CLIC3-202ENST00000480181 C5orf52A6NGY3 159 aa12.17□□□□□ -0.46
CLIC3-202ENST00000480181 ANKRD39Q53RE8 183 aa12.17□□□□□ -0.46
CLIC3-202ENST00000480181 DAND5Q8N907 189 aa12.17□□□□□ -0.46
CLIC3-202ENST00000480181 LITAFQ99732 161 aa12.17□□□□□ -0.46
CLIC3-202ENST00000480181 S100A6P06703 90 aa12.16□□□□□ -0.46
CLIC3-202ENST00000480181 SNRPEP62304 92 aaKnown RBP12.16□□□□□ -0.46
CLIC3-202ENST00000480181 KRTAP13-1Q8IUC0 172 aa12.16□□□□□ -0.46
CLIC3-202ENST00000480181 TTTY13Q9BZ97 58 aa12.16□□□□□ -0.46
CLIC3-202ENST00000480181 S100A2P29034 98 aa12.15□□□□□ -0.46
CLIC3-202ENST00000480181 ADAMTSL4-AS1Q5T5F5 129 aa12.15□□□□□ -0.46
CLIC3-202ENST00000480181 BOD1L2Q8IYS8 172 aa12.15□□□□□ -0.46
CLIC3-202ENST00000480181 EIF4EBP3O60516 100 aaPredicted RBP12.14□□□□□ -0.47
CLIC3-202ENST00000480181 CTAG1AP78358 180 aa12.14□□□□□ -0.47
CLIC3-202ENST00000480181 FAM229BQ4G0N7 80 aa12.14□□□□□ -0.47
CLIC3-202ENST00000480181 SOSTDC1Q6X4U4 206 aa12.14□□□□□ -0.47
CLIC3-202ENST00000480181 ATOH7Q8N100 152 aa12.14□□□□□ -0.47
CLIC3-202ENST00000480181 IGKV2-28A0A075B6P5 120 aa12.13□□□□□ -0.47
CLIC3-202ENST00000480181 IGKV2D-28P01615 120 aa12.13□□□□□ -0.47
CLIC3-202ENST00000480181 M0R378 163 aa12.12□□□□□ -0.47
CLIC3-202ENST00000480181 UBE2AP49459 152 aa12.12□□□□□ -0.47
CLIC3-202ENST00000480181 FAT4Q6V0I7 4981 aa12.11□□□□□ -0.47
CLIC3-202ENST00000480181 TIMM17BO60830 172 aa12.11□□□□□ -0.47
CLIC3-202ENST00000480181 AKR1D1P51857 326 aa12.11□□□□□ -0.47
CLIC3-202ENST00000480181 LCE2AQ5TA79 106 aaPredicted RBP12.11□□□□□ -0.47
CLIC3-202ENST00000480181 ZNF815PA8K554 130 aa12.1□□□□□ -0.47
CLIC3-202ENST00000480181 TMEM238C9JI98 176 aa12.1□□□□□ -0.47
CLIC3-202ENST00000480181 TMEM126AQ9H061 195 aa12.1□□□□□ -0.47
CLIC3-202ENST00000480181 LINC00304Q8N9R0 145 aa12.09□□□□□ -0.47
CLIC3-202ENST00000480181 CDIP1Q9H305 208 aa12.09□□□□□ -0.47
CLIC3-202ENST00000480181 NCR3O14931 201 aa12.07□□□□□ -0.48
CLIC3-202ENST00000480181 TPRXLQ17RH7 258 aa12.07□□□□□ -0.48
CLIC3-202ENST00000480181 TRBV10-2A0A0K0K1G8 114 aa12.06□□□□□ -0.48
CLIC3-202ENST00000480181 NDUFC2O95298 119 aa12.06□□□□□ -0.48
CLIC3-202ENST00000480181 PCP2Q8IVA1 136 aa12.06□□□□□ -0.48
CLIC3-202ENST00000480181 SPRR1AP35321 89 aa12.05□□□□□ -0.48
CLIC3-202ENST00000480181 KRTAP13-2Q52LG2 175 aa12.05□□□□□ -0.48
CLIC3-202ENST00000480181 ANAPC11Q9NYG5 84 aa12.05□□□□□ -0.48
CLIC3-202ENST00000480181 KCNQ1DNQ9H478 68 aa12.04□□□□□ -0.48
CLIC3-202ENST00000480181 MUC17Q685J3 4493 aa12.04□□□□□ -0.48
CLIC3-202ENST00000480181 TRBV10-3A0A0K0K1G6 114 aa12.03□□□□□ -0.48
CLIC3-202ENST00000480181 KRTAP4-16G5E9R7 235 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms