RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 GAGE2DQ9UEU5 116 aa4.16□□□□□ -1.74
HERC4-210ENST00000480158 IGKV2-24A0A0C4DH68 120 aa4.15□□□□□ -1.74
HERC4-210ENST00000480158 A0A0J9YXY3 114 aa4.15□□□□□ -1.74
HERC4-210ENST00000480158 CXCL5P42830 114 aa4.15□□□□□ -1.74
HERC4-210ENST00000480158 NPC2P61916 151 aa4.15□□□□□ -1.74
HERC4-210ENST00000480158 RPL18AQ02543 176 aaKnown RBP4.15□□□□□ -1.74
HERC4-210ENST00000480158 LINC00336Q6ZUF6 198 aa4.15□□□□□ -1.74
HERC4-210ENST00000480158 COX8AP10176 69 aa4.15□□□□□ -1.75
HERC4-210ENST00000480158 CNBPP62633 177 aaKnown RBP4.15□□□□□ -1.75
HERC4-210ENST00000480158 GAGE2BQ13066 116 aa4.15□□□□□ -1.75
HERC4-210ENST00000480158 ERG28Q9UKR5 140 aa4.15□□□□□ -1.75
HERC4-210ENST00000480158 ADAMTSL4-AS1Q5T5F5 129 aa4.14□□□□□ -1.75
HERC4-210ENST00000480158 DPH3Q96FX2 82 aa4.14□□□□□ -1.75
HERC4-210ENST00000480158 XAGE1AQ9HD64 81 aa4.14□□□□□ -1.75
HERC4-210ENST00000480158 DNAH17Q9UFH2 4485 aa4.14□□□□□ -1.75
HERC4-210ENST00000480158 FAT2Q9NYQ8 4349 aa4.14□□□□□ -1.75
HERC4-210ENST00000480158 TRBV30A0A0K0K1B3 111 aa4.14□□□□□ -1.75
HERC4-210ENST00000480158 KRTAP23-1A1A580 65 aa4.14□□□□□ -1.75
HERC4-210ENST00000480158 CHTF8P0CG12 524 aa4.14□□□□□ -1.75
HERC4-210ENST00000480158 SLC25A34Q6PIV7 304 aa4.14□□□□□ -1.75
HERC4-210ENST00000480158 Q6ZRP5 223 aa4.14□□□□□ -1.75
HERC4-210ENST00000480158 BOD1L2Q8IYS8 172 aa4.14□□□□□ -1.75
HERC4-210ENST00000480158 C9orf163Q8N9P6 203 aa4.14□□□□□ -1.75
HERC4-210ENST00000480158 DNAH6Q9C0G6 4158 aa4.13□□□□□ -1.75
HERC4-210ENST00000480158 HERV-K104P63124 156 aa4.13□□□□□ -1.75
HERC4-210ENST00000480158 PKD1P98161 4303 aa4.13□□□□□ -1.75
HERC4-210ENST00000480158 A0A096LNI7 61 aa4.13□□□□□ -1.75
HERC4-210ENST00000480158 A0A0A0MQY5 61 aa4.13□□□□□ -1.75
HERC4-210ENST00000480158 HAMPP81172 84 aa4.13□□□□□ -1.75
HERC4-210ENST00000480158 CIRBPQ14011 172 aaKnown RBP4.13□□□□□ -1.75
HERC4-210ENST00000480158 MIR7-3HGQ8N6C7 128 aa4.13□□□□□ -1.75
HERC4-210ENST00000480158 A0A1B0GVY2 172 aa4.12□□□□□ -1.75
HERC4-210ENST00000480158 NDUFC2-KCTD14E9PQ53 114 aa4.12□□□□□ -1.75
HERC4-210ENST00000480158 PANO1I0J062 215 aa4.12□□□□□ -1.75
HERC4-210ENST00000480158 SFTA2Q6UW10 78 aa4.12□□□□□ -1.75
HERC4-210ENST00000480158 SDIM1Q6ZPB5 146 aa4.12□□□□□ -1.75
HERC4-210ENST00000480158 LOC107984640A0A0U1RRK4 108 aa4.12□□□□□ -1.75
HERC4-210ENST00000480158 C16orf90A8MZG2 172 aa4.12□□□□□ -1.75
HERC4-210ENST00000480158 F8WDY8 70 aa4.12□□□□□ -1.75
HERC4-210ENST00000480158 SRSF9Q13242 221 aaKnown RBP eCLIP4.12□□□□□ -1.75
HERC4-210ENST00000480158 SND1-IT1Q9HBX3 110 aa4.12□□□□□ -1.75
HERC4-210ENST00000480158 FAM168BA1KXE4 195 aa4.11□□□□□ -1.75
HERC4-210ENST00000480158 KRTAP10-1P60331 282 aa4.11□□□□□ -1.75
HERC4-210ENST00000480158 LITAFQ99732 161 aa4.11□□□□□ -1.75
HERC4-210ENST00000480158 UQCR10Q9UDW1 63 aa4.11□□□□□ -1.75
HERC4-210ENST00000480158 HECTD4Q9Y4D8 3996 aa4.11□□□□□ -1.75
HERC4-210ENST00000480158 TMEM238C9JI98 176 aa4.11□□□□□ -1.75
HERC4-210ENST00000480158 PRR3P79522 188 aaKnown RBP4.11□□□□□ -1.75
HERC4-210ENST00000480158 COX17Q14061 63 aa4.11□□□□□ -1.75
HERC4-210ENST00000480158 C9orf129Q5T035 196 aaKnown RBP4.11□□□□□ -1.75
HERC4-210ENST00000480158 C2orf91Q6ZV80 131 aa4.11□□□□□ -1.75
HERC4-210ENST00000480158 HIST1H4GQ99525 98 aa4.11□□□□□ -1.75
HERC4-210ENST00000480158 PKHD1P08F94 4074 aa4.1□□□□□ -1.75
HERC4-210ENST00000480158 MIEN1Q9BRT3 115 aa4.1□□□□□ -1.75
HERC4-210ENST00000480158 DNAH11Q96DT5 4516 aa4.1□□□□□ -1.75
HERC4-210ENST00000480158 HNRNPA3P51991 378 aaKnown RBP4.1□□□□□ -1.75
HERC4-210ENST00000480158 COL5A1-AS1Q5SY13 56 aa4.1□□□□□ -1.75
HERC4-210ENST00000480158 SOSTDC1Q6X4U4 206 aa4.1□□□□□ -1.75
HERC4-210ENST00000480158 FAM19A5Q7Z5A7 132 aaPredicted RBP4.1□□□□□ -1.75
HERC4-210ENST00000480158 MUSTN1Q8IVN3 82 aa4.1□□□□□ -1.75
HERC4-210ENST00000480158 TLX1NBP0CAT3 122 aa4.09□□□□□ -1.75
HERC4-210ENST00000480158 Q8NDZ9 215 aa4.09□□□□□ -1.75
HERC4-210ENST00000480158 LINC00308Q8TCZ7 52 aa4.09□□□□□ -1.75
HERC4-210ENST00000480158 EPPK1P58107 5090 aaKnown RBP4.09□□□□□ -1.76
HERC4-210ENST00000480158 A0A1W2PNN7 141 aa4.08□□□□□ -1.76
HERC4-210ENST00000480158 TIMM17BO60830 172 aa4.08□□□□□ -1.76
HERC4-210ENST00000480158 A0A087WYN8 130 aa4.07□□□□□ -1.76
HERC4-210ENST00000480158 NCR3O14931 201 aa4.07□□□□□ -1.76
HERC4-210ENST00000480158 VPS25Q9BRG1 176 aa4.07□□□□□ -1.76
HERC4-210ENST00000480158 SPANXDQ9BXN6 97 aa4.07□□□□□ -1.76
HERC4-210ENST00000480158 SPANXCQ9NY87 97 aa4.07□□□□□ -1.76
HERC4-210ENST00000480158 DNAH5Q8TE73 4624 aa4.07□□□□□ -1.76
HERC4-210ENST00000480158 UBE2V1Q13404 147 aa4.07□□□□□ -1.76
HERC4-210ENST00000480158 KRTAP7-1Q8IUC3 87 aa4.07□□□□□ -1.76
HERC4-210ENST00000480158 SPACA4Q8TDM5 124 aa4.07□□□□□ -1.76
HERC4-210ENST00000480158 HIGD1BQ9P298 99 aa4.07□□□□□ -1.76
HERC4-210ENST00000480158 CIRBP-AS1Q8TBR5 109 aa4.06□□□□□ -1.76
HERC4-210ENST00000480158 SPANXB1Q9NS25 103 aaPredicted RBP4.06□□□□□ -1.76
HERC4-210ENST00000480158 LINC00474Q9P2X8 69 aa4.06□□□□□ -1.76
HERC4-210ENST00000480158 RPL37AP8A6NKH3 93 aa4.06□□□□□ -1.76
HERC4-210ENST00000480158 HINT1P49773 126 aaPredicted RBP4.06□□□□□ -1.76
HERC4-210ENST00000480158 BATFQ16520 125 aa4.06□□□□□ -1.76
HERC4-210ENST00000480158 SCXQ7RTU7 201 aa4.06□□□□□ -1.76
HERC4-210ENST00000480158 NKAPP1Q8N9T2 125 aa4.06□□□□□ -1.76
HERC4-210ENST00000480158 M0QXV9 152 aa4.05□□□□□ -1.76
HERC4-210ENST00000480158 VPREB1P12018 145 aa4.05□□□□□ -1.76
HERC4-210ENST00000480158 FXYD2P54710 66 aa4.05□□□□□ -1.76
HERC4-210ENST00000480158 PHF5AQ7RTV0 110 aaKnown RBP4.05□□□□□ -1.76
HERC4-210ENST00000480158 CEND1Q8N111 149 aa4.05□□□□□ -1.76
HERC4-210ENST00000480158 PKIGQ9Y2B9 76 aa4.05□□□□□ -1.76
HERC4-210ENST00000480158 C22orf24Q9Y442 160 aa4.05□□□□□ -1.76
HERC4-210ENST00000480158 IGKV2-28A0A075B6P5 120 aa4.05□□□□□ -1.76
HERC4-210ENST00000480158 IGKV2D-28P01615 120 aa4.05□□□□□ -1.76
HERC4-210ENST00000480158 IFITM1P13164 125 aa4.05□□□□□ -1.76
HERC4-210ENST00000480158 HSD52Q0P140 79 aa4.05□□□□□ -1.76
HERC4-210ENST00000480158 Q6ZVH6 145 aa4.05□□□□□ -1.76
HERC4-210ENST00000480158 OR13C6PQ8NH95 151 aa4.05□□□□□ -1.76
HERC4-210ENST00000480158 A6NDN8 102 aa4.04□□□□□ -1.76
HERC4-210ENST00000480158 SMR3BP02814 79 aaPredicted RBP4.04□□□□□ -1.76
HERC4-210ENST00000480158 RPL24P83731 157 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms