RNA–Protein interactions for RNA: ENST00000479424.5

ITSN1-228, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 647 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-228ENST00000479424 URB1-AS1Q96HZ7 61 aa4.83□□□□□ -1.64
ITSN1-228ENST00000479424 HIGD2AQ9BW72 106 aa4.83□□□□□ -1.64
ITSN1-228ENST00000479424 GNB1LQ9BYB4 327 aa4.83□□□□□ -1.64
ITSN1-228ENST00000479424 TRAV9-1A0A075B6T8 112 aa4.82□□□□□ -1.64
ITSN1-228ENST00000479424 DAND5Q8N907 189 aa4.82□□□□□ -1.64
ITSN1-228ENST00000479424 Q8NBF4 154 aa4.82□□□□□ -1.64
ITSN1-228ENST00000479424 C11orf86A6NJI1 115 aa4.81□□□□□ -1.64
ITSN1-228ENST00000479424 FA2HQ7L5A8 372 aa4.81□□□□□ -1.64
ITSN1-228ENST00000479424 KRTAP4-16G5E9R7 235 aaPredicted RBP4.8□□□□□ -1.64
ITSN1-228ENST00000479424 SPRR1AP35321 89 aa4.8□□□□□ -1.64
ITSN1-228ENST00000479424 NDUFA6P56556 154 aa4.8□□□□□ -1.64
ITSN1-228ENST00000479424 TMEM218A2RU14 115 aa4.79□□□□□ -1.64
ITSN1-228ENST00000479424 S100A12P80511 92 aa4.79□□□□□ -1.64
ITSN1-228ENST00000479424 PMCHL1Q16048 86 aa4.79□□□□□ -1.64
ITSN1-228ENST00000479424 LCE2CQ5TA81 110 aa4.79□□□□□ -1.64
ITSN1-228ENST00000479424 LINC00337Q8N6G1 96 aa4.79□□□□□ -1.64
ITSN1-228ENST00000479424 SMCO4Q9NRQ5 59 aa4.79□□□□□ -1.64
ITSN1-228ENST00000479424 LINC01547P58512 204 aaPredicted RBP4.78□□□□□ -1.64
ITSN1-228ENST00000479424 LINC00158P58513 81 aa4.78□□□□□ -1.64
ITSN1-228ENST00000479424 FABP9Q0Z7S8 132 aa4.78□□□□□ -1.64
ITSN1-228ENST00000479424 LINC00483Q53H64 154 aa4.78□□□□□ -1.64
ITSN1-228ENST00000479424 C4orf48Q5BLP8 95 aa4.78□□□□□ -1.64
ITSN1-228ENST00000479424 CLLU1Q5K131 121 aa4.78□□□□□ -1.64
ITSN1-228ENST00000479424 C18orf32Q8TCD1 76 aa4.78□□□□□ -1.64
ITSN1-228ENST00000479424 SMCR5Q8TEV8 140 aa4.78□□□□□ -1.64
ITSN1-228ENST00000479424 KCNQ1DNQ9H478 68 aa4.78□□□□□ -1.64
ITSN1-228ENST00000479424 A0A0U1RRA0 63 aa4.77□□□□□ -1.65
ITSN1-228ENST00000479424 PRYO14603 147 aa4.77□□□□□ -1.65
ITSN1-228ENST00000479424 SPINK1P00995 79 aa4.77□□□□□ -1.65
ITSN1-228ENST00000479424 KRTAP19-2Q3LHN2 52 aa4.77□□□□□ -1.65
ITSN1-228ENST00000479424 TMEM170BQ5T4T1 132 aa4.77□□□□□ -1.65
ITSN1-228ENST00000479424 SFTA2Q6UW10 78 aa4.77□□□□□ -1.65
ITSN1-228ENST00000479424 BAGE3Q86Y29 109 aa4.77□□□□□ -1.65
ITSN1-228ENST00000479424 Q8N377 158 aa4.77□□□□□ -1.65
ITSN1-228ENST00000479424 CRCT1Q9UGL9 99 aa4.77□□□□□ -1.65
ITSN1-228ENST00000479424 ZNF706Q9Y5V0 76 aaPredicted RBP4.77□□□□□ -1.65
ITSN1-228ENST00000479424 TMEM223A0PJW6 202 aa4.76□□□□□ -1.65
ITSN1-228ENST00000479424 NCR3O14931 201 aa4.76□□□□□ -1.65
ITSN1-228ENST00000479424 ERC2-IT1O76042 136 aa4.76□□□□□ -1.65
ITSN1-228ENST00000479424 HBDP02042 147 aa4.76□□□□□ -1.65
ITSN1-228ENST00000479424 LINC00614P0C842 121 aa4.76□□□□□ -1.65
ITSN1-228ENST00000479424 SMIM13P0DJ93 91 aa4.76□□□□□ -1.65
ITSN1-228ENST00000479424 S100PP25815 95 aa4.76□□□□□ -1.65
ITSN1-228ENST00000479424 SEC61BP60468 96 aaKnown RBP4.76□□□□□ -1.65
ITSN1-228ENST00000479424 COX19Q49B96 90 aa4.76□□□□□ -1.65
ITSN1-228ENST00000479424 UQCC3Q6UW78 93 aa4.76□□□□□ -1.65
ITSN1-228ENST00000479424 XP32Q5T750 250 aa4.75□□□□□ -1.65
ITSN1-228ENST00000479424 BOD1L2Q8IYS8 172 aa4.75□□□□□ -1.65
ITSN1-228ENST00000479424 SEC11CQ9BY50 192 aa4.75□□□□□ -1.65
ITSN1-228ENST00000479424 TRBV10-3A0A0K0K1G6 114 aa4.74□□□□□ -1.65
ITSN1-228ENST00000479424 B5MCH6 92 aa4.74□□□□□ -1.65
ITSN1-228ENST00000479424 RPS29P62273 56 aaKnown RBP4.74□□□□□ -1.65
ITSN1-228ENST00000479424 MOBPQ13875 183 aa4.74□□□□□ -1.65
ITSN1-228ENST00000479424 C10orf91Q5T1B1 145 aa4.74□□□□□ -1.65
ITSN1-228ENST00000479424 GAGE2AQ6NT46 116 aa4.74□□□□□ -1.65
ITSN1-228ENST00000479424 MIR7-3HGQ8N6C7 128 aa4.74□□□□□ -1.65
ITSN1-228ENST00000479424 Q9BRP9 147 aa4.74□□□□□ -1.65
ITSN1-228ENST00000479424 CHTOPQ9Y3Y2 248 aaKnown RBP4.74□□□□□ -1.65
ITSN1-228ENST00000479424 IGLV9-49A0A0B4J1Y8 123 aa4.73□□□□□ -1.65
ITSN1-228ENST00000479424 IFITM2Q01629 132 aa4.73□□□□□ -1.65
ITSN1-228ENST00000479424 TRAPPC1Q9Y5R8 145 aa4.73□□□□□ -1.65
ITSN1-228ENST00000479424 ETDCA0A1B0GVM5 59 aa4.72□□□□□ -1.65
ITSN1-228ENST00000479424 S100A6P06703 90 aa4.72□□□□□ -1.65
ITSN1-228ENST00000479424 SSBP3-AS1Q7Z2R9 100 aa4.72□□□□□ -1.65
ITSN1-228ENST00000479424 TRAV12-1A0A0B4J245 112 aa4.71□□□□□ -1.66
ITSN1-228ENST00000479424 LOC107984156A0A0G2JMH3 177 aa4.71□□□□□ -1.66
ITSN1-228ENST00000479424 SLC25A20O43772 301 aa4.71□□□□□ -1.66
ITSN1-228ENST00000479424 MT1HP80294 61 aa4.71□□□□□ -1.66
ITSN1-228ENST00000479424 MEIG1Q5JSS6 88 aa4.71□□□□□ -1.66
ITSN1-228ENST00000479424 ARL17AQ8IVW1 177 aa4.71□□□□□ -1.66
ITSN1-228ENST00000479424 RPS10P5Q9NQ39 176 aa4.71□□□□□ -1.66
ITSN1-228ENST00000479424 FLGP20930 4061 aaPredicted RBP4.7□□□□□ -1.66
ITSN1-228ENST00000479424 LOC105371267A0A1B0GV96 52 aa4.7□□□□□ -1.66
ITSN1-228ENST00000479424 TSPEAR-AS2P59090 65 aa4.7□□□□□ -1.66
ITSN1-228ENST00000479424 RHEBQ15382 184 aa4.7□□□□□ -1.66
ITSN1-228ENST00000479424 SLC7A5P1Q8MH63 180 aa4.7□□□□□ -1.66
ITSN1-228ENST00000479424 FAM19A2Q8N3H0 131 aa4.7□□□□□ -1.66
ITSN1-228ENST00000479424 IFI27L1Q96BM0 104 aa4.7□□□□□ -1.66
ITSN1-228ENST00000479424 NDUFA12Q9UI09 145 aa4.7□□□□□ -1.66
ITSN1-228ENST00000479424 HERV-K104P63124 156 aa4.69□□□□□ -1.66
ITSN1-228ENST00000479424 Q6ZRX8 168 aa4.69□□□□□ -1.66
ITSN1-228ENST00000479424 TRBV10-2A0A0K0K1G8 114 aa4.68□□□□□ -1.66
ITSN1-228ENST00000479424 DDTP30046 118 aa4.68□□□□□ -1.66
ITSN1-228ENST00000479424 COMMD7Q86VX2 200 aa4.68□□□□□ -1.66
ITSN1-228ENST00000479424 MYMXA0A1B0GTQ4 84 aa4.67□□□□□ -1.66
ITSN1-228ENST00000479424 ST20-AS1Q8NBB2 130 aa4.67□□□□□ -1.66
ITSN1-228ENST00000479424 LINC00587B1AMM8 73 aa4.66□□□□□ -1.66
ITSN1-228ENST00000479424 EIF4EBP3O60516 100 aaPredicted RBP4.66□□□□□ -1.66
ITSN1-228ENST00000479424 IGLV6-57P01721 117 aa4.66□□□□□ -1.66
ITSN1-228ENST00000479424 LORP23490 312 aaPredicted RBP4.66□□□□□ -1.66
ITSN1-228ENST00000479424 PCOTHQ58A44 107 aa4.66□□□□□ -1.66
ITSN1-228ENST00000479424 CHCHD1Q96BP2 118 aaKnown RBP4.66□□□□□ -1.66
ITSN1-228ENST00000479424 YPEL4Q96NS1 127 aa4.66□□□□□ -1.66
ITSN1-228ENST00000479424 KRTAP3-3Q9BYR6 98 aa4.66□□□□□ -1.66
ITSN1-228ENST00000479424 KRTAP3-2Q9BYR7 98 aa4.66□□□□□ -1.66
ITSN1-228ENST00000479424 TMA7Q9Y2S6 64 aaKnown RBP4.66□□□□□ -1.66
ITSN1-228ENST00000479424 LEPROTO15243 131 aa4.65□□□□□ -1.67
ITSN1-228ENST00000479424 C9orf153Q5TBE3 101 aa4.65□□□□□ -1.67
ITSN1-228ENST00000479424 SOSTDC1Q6X4U4 206 aa4.65□□□□□ -1.67
ITSN1-228ENST00000479424 MAP1LC3CQ9BXW4 147 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms