RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 LINC00312Q9Y6C7 94 aa2.53□□□□□ -2
CCDC171-207ENST00000478913 IGHV3-72A0A0B4J1Y9 119 aa2.52□□□□□ -2.01
CCDC171-207ENST00000478913 MYMXA0A1B0GTQ4 84 aa2.52□□□□□ -2.01
CCDC171-207ENST00000478913 TINCRA0A1B0GVN0 87 aa2.52□□□□□ -2.01
CCDC171-207ENST00000478913 ODF3BA8MYP8 253 aa2.52□□□□□ -2.01
CCDC171-207ENST00000478913 H3BVH4 76 aa2.52□□□□□ -2.01
CCDC171-207ENST00000478913 LGALS1P09382 135 aaKnown RBP2.52□□□□□ -2.01
CCDC171-207ENST00000478913 COX6CP09669 75 aa2.52□□□□□ -2.01
CCDC171-207ENST00000478913 ARMS2P0C7Q2 107 aa2.52□□□□□ -2.01
CCDC171-207ENST00000478913 PSMB2P49721 201 aa2.52□□□□□ -2.01
CCDC171-207ENST00000478913 CCL18P55774 89 aa2.52□□□□□ -2.01
CCDC171-207ENST00000478913 DLX6P56179 175 aa2.52□□□□□ -2.01
CCDC171-207ENST00000478913 ETDBQ3ZM63 59 aa2.52□□□□□ -2.01
CCDC171-207ENST00000478913 LYZL1Q6UWQ5 148 aa2.52□□□□□ -2.01
CCDC171-207ENST00000478913 ZNF833PQ6ZTB9 187 aa2.52□□□□□ -2.01
CCDC171-207ENST00000478913 SMIM20Q8N5G0 67 aa2.52□□□□□ -2.01
CCDC171-207ENST00000478913 Q8N8P6 123 aa2.52□□□□□ -2.01
CCDC171-207ENST00000478913 ST20-AS1Q8NBB2 130 aa2.52□□□□□ -2.01
CCDC171-207ENST00000478913 NAA38Q9BRA0 125 aaKnown RBP2.52□□□□□ -2.01
CCDC171-207ENST00000478913 KRTAP4-1Q9BYQ7 146 aa2.52□□□□□ -2.01
CCDC171-207ENST00000478913 LINC00574Q9H8X3 128 aa2.52□□□□□ -2.01
CCDC171-207ENST00000478913 ERG28Q9UKR5 140 aa2.52□□□□□ -2.01
CCDC171-207ENST00000478913 TRBV19A0A075B6N1 114 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 TRBV25-1A0A075B6N4 114 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 A0A087WX48 190 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 IGHV3-49A0A0A0MS15 119 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.51□□□□□ -2.01
CCDC171-207ENST00000478913 TRAV12-1A0A0B4J245 112 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 IGHV3OR16-9A0A0B4J2B5 98 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 FABP5P3A8MUU1 101 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 FGF6P10767 208 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 IFITM1P13164 125 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 CCL3L1P16619 93 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 WFDC2Q14508 124 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 PMVKQ15126 192 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 KRTAP19-6Q3LI70 58 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 MRPL51Q4U2R6 128 aaKnown RBP2.51□□□□□ -2.01
CCDC171-207ENST00000478913 CLEC19AQ6UXS0 136 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 TEN1Q86WV5 123 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 SPANXA2-OT1Q8N9U9 137 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 OR13C6PQ8NH95 151 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 DYNLRB2Q8TF09 96 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 COPS9Q8WXC6 57 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 LEAP2Q969E1 77 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 SCGB3A1Q96QR1 104 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 SHANK2-AS3Q9BTD1 123 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 TMEM243Q9BU79 118 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 MRPL20Q9BYC9 149 aaKnown RBP2.51□□□□□ -2.01
CCDC171-207ENST00000478913 TMEM126AQ9H061 195 aa2.51□□□□□ -2.01
CCDC171-207ENST00000478913 IGKV1OR2-108A0A075B7D4 117 aa2.5□□□□□ -2.01
CCDC171-207ENST00000478913 TMSB15BA0A087X1C1 80 aa2.5□□□□□ -2.01
CCDC171-207ENST00000478913 TRAV8-2A0A0B4J237 113 aa2.5□□□□□ -2.01
CCDC171-207ENST00000478913 TRAV8-4A0A0B4J246 113 aa2.5□□□□□ -2.01
CCDC171-207ENST00000478913 ZNF815PA8K554 130 aa2.5□□□□□ -2.01
CCDC171-207ENST00000478913 SH2D1AO60880 128 aa2.5□□□□□ -2.01
CCDC171-207ENST00000478913 NCR2O95944 276 aa2.5□□□□□ -2.01
CCDC171-207ENST00000478913 NPYP01303 97 aa2.5□□□□□ -2.01
CCDC171-207ENST00000478913 LGALS3P17931 250 aaKnown RBP2.5□□□□□ -2.01
CCDC171-207ENST00000478913 FXYD2P54710 66 aa2.5□□□□□ -2.01
CCDC171-207ENST00000478913 CD164Q04900 197 aa2.5□□□□□ -2.01
CCDC171-207ENST00000478913 ATXN8Q156A1 80 aa2.5□□□□□ -2.01
CCDC171-207ENST00000478913 DEFB114Q30KQ6 69 aa2.5□□□□□ -2.01
CCDC171-207ENST00000478913 TMEM78Q5T7P6 136 aa2.5□□□□□ -2.01
CCDC171-207ENST00000478913 SPANXN1Q5VSR9 72 aa2.5□□□□□ -2.01
CCDC171-207ENST00000478913 PATE2Q6UY27 113 aa2.5□□□□□ -2.01
CCDC171-207ENST00000478913 FAM19A5Q7Z5A7 132 aaPredicted RBP2.5□□□□□ -2.01
CCDC171-207ENST00000478913 AMN1Q8IY45 258 aa2.5□□□□□ -2.01
CCDC171-207ENST00000478913 LINC00311Q8N616 119 aa2.5□□□□□ -2.01
CCDC171-207ENST00000478913 ZC2HC1AQ96GY0 325 aa2.5□□□□□ -2.01
CCDC171-207ENST00000478913 SLC50A1Q9BRV3 221 aa2.5□□□□□ -2.01
CCDC171-207ENST00000478913 CHCHD7Q9BUK0 85 aa2.5□□□□□ -2.01
CCDC171-207ENST00000478913 PRO0628Q9UI54 55 aa2.5□□□□□ -2.01
CCDC171-207ENST00000478913 RBAKDNA6NC62 111 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 LINC01546A6NGU7 62 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 F8VRH5 84 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 G3V318 75 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 H3BRN7 92 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 K7ERJ3 54 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 NDUFA3O95167 84 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 IGKV1-16P04430 117 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 IGKV4-1P06312 121 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 ACYP1P07311 99 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 CGB3P0DN86 165 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 CGB7P0DN87 165 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 S100A4P26447 101 aaKnown RBP2.49□□□□□ -2.01
CCDC171-207ENST00000478913 PFN2P35080 140 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 WT1-ASQ06250 92 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 MINOS1Q5TGZ0 78 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 FAM222AQ5U5X8 452 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 TEX36Q5VZQ5 186 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 Q6Q795 121 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 Q6ZUT4 128 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 FAM19A1Q7Z5A9 133 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 EXOC3-AS1Q8N2X6 119 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 LINC00304Q8N9R0 145 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 TMEM141Q96I45 108 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 GAFA1Q96PS6 74 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 C20orf78Q9BR46 151 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 FBXL15Q9H469 300 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 PRO1854Q9UHT4 67 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms