RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 IBA57-AS1B1ANH7 110 aa3.42□□□□□ -1.86
SF3B6-202ENST00000478050 DEFB130BP0DP73 79 aa3.42□□□□□ -1.86
SF3B6-202ENST00000478050 DEFB130AP0DP74 79 aa3.42□□□□□ -1.86
SF3B6-202ENST00000478050 RPL28P46779 137 aaKnown RBP3.42□□□□□ -1.86
SF3B6-202ENST00000478050 CKS1BP61024 79 aa3.42□□□□□ -1.86
SF3B6-202ENST00000478050 SS18Q15532 418 aa3.42□□□□□ -1.86
SF3B6-202ENST00000478050 MIR7-3HGQ8N6C7 128 aa3.42□□□□□ -1.86
SF3B6-202ENST00000478050 MRAPQ8TCY5 172 aa3.42□□□□□ -1.86
SF3B6-202ENST00000478050 TOMM7Q9P0U1 55 aa3.42□□□□□ -1.86
SF3B6-202ENST00000478050 PRO0255Q9UI72 69 aa3.42□□□□□ -1.86
SF3B6-202ENST00000478050 HERC2O95714 4834 aa3.42□□□□□ -1.86
SF3B6-202ENST00000478050 RYR2Q92736 4967 aa3.42□□□□□ -1.86
SF3B6-202ENST00000478050 IGKV3OR2-268A0A0C4DH90 116 aa3.41□□□□□ -1.86
SF3B6-202ENST00000478050 SNCGO76070 127 aa3.41□□□□□ -1.86
SF3B6-202ENST00000478050 ACYP1P07311 99 aa3.41□□□□□ -1.86
SF3B6-202ENST00000478050 APOC4P55056 127 aa3.41□□□□□ -1.86
SF3B6-202ENST00000478050 LINC00158P58513 81 aa3.41□□□□□ -1.86
SF3B6-202ENST00000478050 Q6Q795 121 aa3.41□□□□□ -1.86
SF3B6-202ENST00000478050 CITED1Q99966 193 aa3.41□□□□□ -1.86
SF3B6-202ENST00000478050 SND1-IT1Q9HBX3 110 aa3.41□□□□□ -1.86
SF3B6-202ENST00000478050 H0YGX0 51 aa3.4□□□□□ -1.87
SF3B6-202ENST00000478050 C3orf84H3BNL1 204 aa3.4□□□□□ -1.87
SF3B6-202ENST00000478050 CXCL5P42830 114 aa3.4□□□□□ -1.87
SF3B6-202ENST00000478050 CCL18P55774 89 aa3.4□□□□□ -1.87
SF3B6-202ENST00000478050 C5orf38Q86SI9 138 aa3.4□□□□□ -1.87
SF3B6-202ENST00000478050 Q8IZM0 81 aa3.4□□□□□ -1.87
SF3B6-202ENST00000478050 STAB2Q8WWQ8 2551 aa3.39□□□□□ -1.87
SF3B6-202ENST00000478050 TENM2Q9NT68 2774 aa3.39□□□□□ -1.87
SF3B6-202ENST00000478050 IGKV2-28A0A075B6P5 120 aa3.39□□□□□ -1.87
SF3B6-202ENST00000478050 IGKV2D-28P01615 120 aa3.39□□□□□ -1.87
SF3B6-202ENST00000478050 BAALC-AS2P0C853 105 aa3.39□□□□□ -1.87
SF3B6-202ENST00000478050 INAFM2P0DMQ5 153 aa3.39□□□□□ -1.87
SF3B6-202ENST00000478050 MIFP14174 115 aa3.39□□□□□ -1.87
SF3B6-202ENST00000478050 DAD1P61803 113 aa3.39□□□□□ -1.87
SF3B6-202ENST00000478050 GAGE2BQ13066 116 aa3.39□□□□□ -1.87
SF3B6-202ENST00000478050 GAGE2EQ4V326 116 aa3.39□□□□□ -1.87
SF3B6-202ENST00000478050 C6orf226Q5I0X4 101 aa3.39□□□□□ -1.87
SF3B6-202ENST00000478050 LINC00337Q8N6G1 96 aa3.39□□□□□ -1.87
SF3B6-202ENST00000478050 C15orf53Q8NAA6 179 aa3.39□□□□□ -1.87
SF3B6-202ENST00000478050 GAGE2DQ9UEU5 116 aa3.39□□□□□ -1.87
SF3B6-202ENST00000478050 IGHV4-28A0A0C4DH34 117 aa3.38□□□□□ -1.87
SF3B6-202ENST00000478050 DNAL4O96015 105 aa3.38□□□□□ -1.87
SF3B6-202ENST00000478050 ATP5G1P05496 136 aa3.38□□□□□ -1.87
SF3B6-202ENST00000478050 PFN2P35080 140 aa3.38□□□□□ -1.87
SF3B6-202ENST00000478050 XCL1P47992 114 aa3.38□□□□□ -1.87
SF3B6-202ENST00000478050 COX17Q14061 63 aa3.38□□□□□ -1.87
SF3B6-202ENST00000478050 DEFB135Q30KP9 77 aa3.38□□□□□ -1.87
SF3B6-202ENST00000478050 CD164L2Q6UWJ8 174 aa3.38□□□□□ -1.87
SF3B6-202ENST00000478050 MUC7Q8TAX7 377 aa3.38□□□□□ -1.87
SF3B6-202ENST00000478050 SMIM11BQ8TCY0 68 aa3.38□□□□□ -1.87
SF3B6-202ENST00000478050 LCE6AA0A183 80 aa3.37□□□□□ -1.87
SF3B6-202ENST00000478050 A0A1B0GX51 115 aa3.37□□□□□ -1.87
SF3B6-202ENST00000478050 NDUFC2O95298 119 aa3.37□□□□□ -1.87
SF3B6-202ENST00000478050 SPART-AS1P0CW21 52 aa3.37□□□□□ -1.87
SF3B6-202ENST00000478050 TTC32Q5I0X7 151 aa3.37□□□□□ -1.87
SF3B6-202ENST00000478050 Q8NAQ8 132 aa3.37□□□□□ -1.87
SF3B6-202ENST00000478050 CHCHD10Q8WYQ3 142 aaPredicted RBP3.37□□□□□ -1.87
SF3B6-202ENST00000478050 FAM218AQ96MZ4 157 aa3.37□□□□□ -1.87
SF3B6-202ENST00000478050 ANAPC13Q9BS18 74 aa3.37□□□□□ -1.87
SF3B6-202ENST00000478050 A0A096LPF7 62 aa3.36□□□□□ -1.87
SF3B6-202ENST00000478050 TRBV7-7A0A0K0K1E9 115 aa3.36□□□□□ -1.87
SF3B6-202ENST00000478050 ANGP03950 147 aaKnown RBP3.36□□□□□ -1.87
SF3B6-202ENST00000478050 NDUFV3P56181 108 aaKnown RBP3.36□□□□□ -1.87
SF3B6-202ENST00000478050 SEC61BP60468 96 aaKnown RBP3.36□□□□□ -1.87
SF3B6-202ENST00000478050 REG3AQ06141 175 aa3.36□□□□□ -1.87
SF3B6-202ENST00000478050 KIAA0087Q14695 138 aa3.36□□□□□ -1.87
SF3B6-202ENST00000478050 C10orf25Q5T742 122 aa3.36□□□□□ -1.87
SF3B6-202ENST00000478050 LELP1Q5T871 98 aa3.36□□□□□ -1.87
SF3B6-202ENST00000478050 CLPSL2Q6UWE3 100 aa3.36□□□□□ -1.87
SF3B6-202ENST00000478050 LINC00643Q86TS7 51 aa3.36□□□□□ -1.87
SF3B6-202ENST00000478050 LINC00269Q8N2A0 174 aa3.36□□□□□ -1.87
SF3B6-202ENST00000478050 WFDC9Q8NEX5 89 aa3.36□□□□□ -1.87
SF3B6-202ENST00000478050 OR13C6PQ8NH95 151 aa3.36□□□□□ -1.87
SF3B6-202ENST00000478050 IMUPQ9GZP8 106 aa3.36□□□□□ -1.87
SF3B6-202ENST00000478050 C11orf68Q9H3H3 251 aaKnown RBP3.36□□□□□ -1.87
SF3B6-202ENST00000478050 C22orf24Q9Y442 160 aa3.36□□□□□ -1.87
SF3B6-202ENST00000478050 A0A087WYN8 130 aa3.35□□□□□ -1.87
SF3B6-202ENST00000478050 PRB2P02812 416 aaPredicted RBP3.35□□□□□ -1.87
SF3B6-202ENST00000478050 GAGE2AQ6NT46 116 aa3.35□□□□□ -1.87
SF3B6-202ENST00000478050 LINC00167Q96N53 147 aa3.35□□□□□ -1.87
SF3B6-202ENST00000478050 Q9HAA7 133 aa3.35□□□□□ -1.87
SF3B6-202ENST00000478050 CELA1Q9UNI1 258 aa3.35□□□□□ -1.87
SF3B6-202ENST00000478050 KLK5Q9Y337 293 aaPredicted RBP3.35□□□□□ -1.87
SF3B6-202ENST00000478050 UBR4Q5T4S7 5183 aa3.34□□□□□ -1.87
SF3B6-202ENST00000478050 LECT2O14960 151 aa3.34□□□□□ -1.87
SF3B6-202ENST00000478050 DEFB4AO15263 64 aa3.34□□□□□ -1.87
SF3B6-202ENST00000478050 SPAG11BQ08648 103 aa3.34□□□□□ -1.87
SF3B6-202ENST00000478050 SDIM1Q6ZPB5 146 aa3.34□□□□□ -1.87
SF3B6-202ENST00000478050 OBSCN-AS1Q96MR7 158 aa3.34□□□□□ -1.87
SF3B6-202ENST00000478050 TMEM126AQ9H061 195 aa3.34□□□□□ -1.87
SF3B6-202ENST00000478050 ORMDL1Q9P0S3 153 aa3.34□□□□□ -1.87
SF3B6-202ENST00000478050 CMYA5Q8N3K9 4069 aa3.34□□□□□ -1.88
SF3B6-202ENST00000478050 COL7A1Q02388 2944 aa3.33□□□□□ -1.88
SF3B6-202ENST00000478050 IGLV10-54A0A075B6I4 117 aa3.33□□□□□ -1.88
SF3B6-202ENST00000478050 GVQW2A0A096LPI5 108 aaPredicted RBP3.33□□□□□ -1.88
SF3B6-202ENST00000478050 A0A0J9YWU9 116 aa3.33□□□□□ -1.88
SF3B6-202ENST00000478050 H3BNG1 76 aa3.33□□□□□ -1.88
SF3B6-202ENST00000478050 IGHV4-30-4P0DP06 118 aa3.33□□□□□ -1.88
SF3B6-202ENST00000478050 HTN3P15516 51 aa3.33□□□□□ -1.88
SF3B6-202ENST00000478050 NANOS2P60321 138 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms