RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 CCDC153Q494R4 210 aa-1.98□□□□□ -2.73
NCKAP1-204ENST00000477988 SCN11AQ9UI33 1791 aa-1.98□□□□□ -2.73
NCKAP1-204ENST00000477988 CLIP1P30622 1438 aa-1.99□□□□□ -2.73
NCKAP1-204ENST00000477988 CPSF1Q10570 1443 aaKnown RBP-1.99□□□□□ -2.73
NCKAP1-204ENST00000477988 CFTRP13569 1480 aa-1.99□□□□□ -2.73
NCKAP1-204ENST00000477988 E5RI56 91 aa-1.99□□□□□ -2.73
NCKAP1-204ENST00000477988 GNG10P50151 68 aa-1.99□□□□□ -2.73
NCKAP1-204ENST00000477988 C12orf73Q69YU5 71 aa-1.99□□□□□ -2.73
NCKAP1-204ENST00000477988 COPZ2Q9P299 210 aa-1.99□□□□□ -2.73
NCKAP1-204ENST00000477988 SHPRHQ149N8 1683 aa-1.99□□□□□ -2.73
NCKAP1-204ENST00000477988 ROBO1Q9Y6N7 1651 aa-1.99□□□□□ -2.73
NCKAP1-204ENST00000477988 GUCA1AP43080 201 aaPredicted RBP-2□□□□□ -2.73
NCKAP1-204ENST00000477988 LSM10Q969L4 123 aaKnown RBP-2□□□□□ -2.73
NCKAP1-204ENST00000477988 DDA1Q9BW61 102 aa-2□□□□□ -2.73
NCKAP1-204ENST00000477988 TMEM191AQ9H0A3 160 aa-2□□□□□ -2.73
NCKAP1-204ENST00000477988 GINS2Q9Y248 185 aa-2□□□□□ -2.73
NCKAP1-204ENST00000477988 ARL2-SNX15V9GYD0 113 aa-2□□□□□ -2.73
NCKAP1-204ENST00000477988 V9GYQ6 96 aa-2□□□□□ -2.73
NCKAP1-204ENST00000477988 ZFHX4Q86UP3 3567 aa-2□□□□□ -2.73
NCKAP1-204ENST00000477988 PIGBOS1A0A0B4J2F0 54 aa-2.01□□□□□ -2.73
NCKAP1-204ENST00000477988 DBIP07108 87 aaKnown RBP-2.01□□□□□ -2.73
NCKAP1-204ENST00000477988 C6orf201Q7Z4U5 140 aa-2.01□□□□□ -2.73
NCKAP1-204ENST00000477988 CENPHQ9H3R5 247 aa-2.01□□□□□ -2.73
NCKAP1-204ENST00000477988 FREM2Q5SZK8 3169 aa-2.01□□□□□ -2.73
NCKAP1-204ENST00000477988 PLXNC1O60486 1568 aa-2.02□□□□□ -2.73
NCKAP1-204ENST00000477988 QSER1Q2KHR3 1735 aa-2.02□□□□□ -2.73
NCKAP1-204ENST00000477988 CHKB-CPT1BH3BT56 60 aa-2.02□□□□□ -2.73
NCKAP1-204ENST00000477988 SMR3BP02814 79 aaPredicted RBP-2.02□□□□□ -2.73
NCKAP1-204ENST00000477988 SAA2P0DJI9 122 aaPredicted RBP-2.02□□□□□ -2.73
NCKAP1-204ENST00000477988 SNCAP37840 140 aa-2.02□□□□□ -2.73
NCKAP1-204ENST00000477988 SPANXCQ9NY87 97 aa-2.02□□□□□ -2.73
NCKAP1-204ENST00000477988 GRIN2AQ12879 1464 aa-2.02□□□□□ -2.73
NCKAP1-204ENST00000477988 FAM223BA6NKX1 122 aa-2.03□□□□□ -2.73
NCKAP1-204ENST00000477988 TSTD3H0UI37 97 aa-2.03□□□□□ -2.73
NCKAP1-204ENST00000477988 FGF7P21781 194 aa-2.03□□□□□ -2.73
NCKAP1-204ENST00000477988 KCNRGQ8N5I3 272 aa-2.03□□□□□ -2.73
NCKAP1-204ENST00000477988 TPT1P8Q9HAU6 139 aa-2.03□□□□□ -2.73
NCKAP1-204ENST00000477988 LINC00846Q9NV44 126 aa-2.03□□□□□ -2.73
NCKAP1-204ENST00000477988 HSPB11Q9Y547 144 aa-2.03□□□□□ -2.73
NCKAP1-204ENST00000477988 A2ML1A8K2U0 1454 aa-2.03□□□□□ -2.73
NCKAP1-204ENST00000477988 CDC42BPGQ6DT37 1551 aa-2.03□□□□□ -2.73
NCKAP1-204ENST00000477988 SPTY2D1-AS1A0A0U1RR47 76 aa-2.04□□□□□ -2.74
NCKAP1-204ENST00000477988 MON2Q7Z3U7 1717 aa-2.04□□□□□ -2.74
NCKAP1-204ENST00000477988 TOPAZ1Q8N9V7 1692 aa-2.04□□□□□ -2.74
NCKAP1-204ENST00000477988 SMIM3Q9BZL3 60 aa-2.04□□□□□ -2.74
NCKAP1-204ENST00000477988 LINC00474Q9P2X8 69 aa-2.04□□□□□ -2.74
NCKAP1-204ENST00000477988 CSMD2Q7Z408 3487 aa-2.04□□□□□ -2.74
NCKAP1-204ENST00000477988 C5P01031 1676 aa-2.05□□□□□ -2.74
NCKAP1-204ENST00000477988 CUL7Q14999 1698 aa-2.05□□□□□ -2.74
NCKAP1-204ENST00000477988 A0A087WVE0 104 aa-2.05□□□□□ -2.74
NCKAP1-204ENST00000477988 A0A1B0GWA3 101 aa-2.05□□□□□ -2.74
NCKAP1-204ENST00000477988 DPH3Q96FX2 82 aa-2.05□□□□□ -2.74
NCKAP1-204ENST00000477988 SPANXDQ9BXN6 97 aa-2.05□□□□□ -2.74
NCKAP1-204ENST00000477988 UQCR10Q9UDW1 63 aa-2.05□□□□□ -2.74
NCKAP1-204ENST00000477988 TNRC6CQ9HCJ0 1690 aaKnown RBP-2.06□□□□□ -2.74
NCKAP1-204ENST00000477988 H7BZZ5 65 aa-2.06□□□□□ -2.74
NCKAP1-204ENST00000477988 NBEAP1P0C6P0 100 aa-2.06□□□□□ -2.74
NCKAP1-204ENST00000477988 PRLHP81277 87 aa-2.06□□□□□ -2.74
NCKAP1-204ENST00000477988 C9orf153Q5TBE3 101 aa-2.06□□□□□ -2.74
NCKAP1-204ENST00000477988 COMMD6Q7Z4G1 85 aa-2.06□□□□□ -2.74
NCKAP1-204ENST00000477988 SERP1Q9Y6X1 66 aa-2.07□□□□□ -2.74
NCKAP1-204ENST00000477988 SAMD9Q5K651 1589 aa-2.07□□□□□ -2.74
NCKAP1-204ENST00000477988 KIF20BQ96Q89 1820 aa-2.07□□□□□ -2.74
NCKAP1-204ENST00000477988 RGPD3A6NKT7 1758 aaPredicted RBP-2.08□□□□□ -2.74
NCKAP1-204ENST00000477988 RGPD8O14715 1765 aaPredicted RBP-2.08□□□□□ -2.74
NCKAP1-204ENST00000477988 RGPD4Q7Z3J3 1758 aa-2.08□□□□□ -2.74
NCKAP1-204ENST00000477988 RGPD5Q99666 1765 aa-2.08□□□□□ -2.74
NCKAP1-204ENST00000477988 CDC42BPAQ5VT25 1732 aa-2.08□□□□□ -2.74
NCKAP1-204ENST00000477988 USP32Q8NFA0 1604 aa-2.08□□□□□ -2.74
NCKAP1-204ENST00000477988 A0A0G2JND7 137 aa-2.08□□□□□ -2.74
NCKAP1-204ENST00000477988 J3QR89 54 aa-2.08□□□□□ -2.74
NCKAP1-204ENST00000477988 K7ERU9 68 aa-2.08□□□□□ -2.74
NCKAP1-204ENST00000477988 ARL11Q969Q4 196 aa-2.08□□□□□ -2.74
NCKAP1-204ENST00000477988 PDCD10Q9BUL8 212 aa-2.08□□□□□ -2.74
NCKAP1-204ENST00000477988 FABP1P07148 127 aa-2.09□□□□□ -2.74
NCKAP1-204ENST00000477988 SMCO1Q147U7 214 aa-2.09□□□□□ -2.74
NCKAP1-204ENST00000477988 CDC26Q8NHZ8 85 aa-2.09□□□□□ -2.74
NCKAP1-204ENST00000477988 CCDC167Q9P0B6 97 aa-2.09□□□□□ -2.74
NCKAP1-204ENST00000477988 CHD1O14646 1710 aa-2.1□□□□□ -2.75
NCKAP1-204ENST00000477988 TRBV7-7A0A0K0K1E9 115 aa-2.1□□□□□ -2.75
NCKAP1-204ENST00000477988 H0Y9P7 68 aa-2.1□□□□□ -2.75
NCKAP1-204ENST00000477988 M0R2Z0 102 aa-2.1□□□□□ -2.75
NCKAP1-204ENST00000477988 NEFHP12036 1026 aa-2.1□□□□□ -2.75
NCKAP1-204ENST00000477988 PP6455Q8WZ26 134 aa-2.1□□□□□ -2.75
NCKAP1-204ENST00000477988 TCEAL4Q96EI5 215 aa-2.1□□□□□ -2.75
NCKAP1-204ENST00000477988 RERGLQ9H628 205 aa-2.1□□□□□ -2.75
NCKAP1-204ENST00000477988 SPANXA1Q9NS26 97 aa-2.1□□□□□ -2.75
NCKAP1-204ENST00000477988 GSKIPQ9P0R6 139 aa-2.1□□□□□ -2.75
NCKAP1-204ENST00000477988 TIAM2Q8IVF5 1701 aa-2.11□□□□□ -2.75
NCKAP1-204ENST00000477988 FOCADQ5VW36 1801 aa-2.11□□□□□ -2.75
NCKAP1-204ENST00000477988 NDUFA3O95167 84 aa-2.11□□□□□ -2.75
NCKAP1-204ENST00000477988 SCGB1A1P11684 91 aa-2.11□□□□□ -2.75
NCKAP1-204ENST00000477988 RPS25P62851 125 aaKnown RBP-2.11□□□□□ -2.75
NCKAP1-204ENST00000477988 Q0VG73 95 aa-2.11□□□□□ -2.75
NCKAP1-204ENST00000477988 SFTA2Q6UW10 78 aa-2.11□□□□□ -2.75
NCKAP1-204ENST00000477988 CLPSL2Q6UWE3 100 aa-2.11□□□□□ -2.75
NCKAP1-204ENST00000477988 COX6B2Q6YFQ2 88 aa-2.11□□□□□ -2.75
NCKAP1-204ENST00000477988 COPS9Q8WXC6 57 aa-2.11□□□□□ -2.75
NCKAP1-204ENST00000477988 PPP3R2Q96LZ3 170 aa-2.11□□□□□ -2.75
NCKAP1-204ENST00000477988 SNRNP25Q9BV90 132 aaKnown RBP-2.11□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms