RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 LYRM9A8MSI8 78 aa9.3□□□□□ -0.92
HLA-DMA-208ENST00000477541 CUBNO60494 3623 aa9.29□□□□□ -0.92
HLA-DMA-208ENST00000477541 LOC107984640A0A0U1RRK4 108 aa9.29□□□□□ -0.92
HLA-DMA-208ENST00000477541 C6orf223Q8N319 242 aa9.29□□□□□ -0.92
HLA-DMA-208ENST00000477541 LINC01006Q8NI28 216 aa9.29□□□□□ -0.92
HLA-DMA-208ENST00000477541 WFDC10AQ9H1F0 79 aa9.29□□□□□ -0.92
HLA-DMA-208ENST00000477541 C11orf68Q9H3H3 251 aaKnown RBP9.29□□□□□ -0.92
HLA-DMA-208ENST00000477541 RBM3P98179 157 aaKnown RBP9.28□□□□□ -0.92
HLA-DMA-208ENST00000477541 ANK3Q12955 4377 aaKnown RBP9.28□□□□□ -0.92
HLA-DMA-208ENST00000477541 SONP18583 2426 aaKnown RBP9.28□□□□□ -0.92
HLA-DMA-208ENST00000477541 DEFB130BP0DP73 79 aa9.28□□□□□ -0.92
HLA-DMA-208ENST00000477541 DEFB130AP0DP74 79 aa9.28□□□□□ -0.92
HLA-DMA-208ENST00000477541 Q6ZQT0 140 aa9.28□□□□□ -0.92
HLA-DMA-208ENST00000477541 C6orf99Q4VX62 202 aa9.27□□□□□ -0.93
HLA-DMA-208ENST00000477541 CHCHD10Q8WYQ3 142 aaPredicted RBP9.27□□□□□ -0.93
HLA-DMA-208ENST00000477541 ESM1Q9NQ30 184 aa9.27□□□□□ -0.93
HLA-DMA-208ENST00000477541 C9orf66Q5T8R8 295 aa9.26□□□□□ -0.93
HLA-DMA-208ENST00000477541 A0A0J9YWU9 116 aa9.25□□□□□ -0.93
HLA-DMA-208ENST00000477541 IGHV4-30-4P0DP06 118 aa9.25□□□□□ -0.93
HLA-DMA-208ENST00000477541 CYSTM1Q9H1C7 97 aa9.25□□□□□ -0.93
HLA-DMA-208ENST00000477541 TRAV7A0A075B6U4 112 aa9.25□□□□□ -0.93
HLA-DMA-208ENST00000477541 CXCL6P80162 114 aa9.25□□□□□ -0.93
HLA-DMA-208ENST00000477541 REG3AQ06141 175 aa9.25□□□□□ -0.93
HLA-DMA-208ENST00000477541 ENHOQ6UWT2 76 aa9.25□□□□□ -0.93
HLA-DMA-208ENST00000477541 GVQW2A0A096LPI5 108 aaPredicted RBP9.24□□□□□ -0.93
HLA-DMA-208ENST00000477541 IGLV6-57P01721 117 aa9.24□□□□□ -0.93
HLA-DMA-208ENST00000477541 LINC00269Q8N2A0 174 aa9.24□□□□□ -0.93
HLA-DMA-208ENST00000477541 X6R8D5 127 aa9.24□□□□□ -0.93
HLA-DMA-208ENST00000477541 NOTCH3Q9UM47 2321 aa9.23□□□□□ -0.93
HLA-DMA-208ENST00000477541 TRBV7-6A0A0J9YX20 115 aa9.22□□□□□ -0.93
HLA-DMA-208ENST00000477541 DSCR8Q96T75 97 aa9.22□□□□□ -0.93
HLA-DMA-208ENST00000477541 WNK1Q9H4A3 2382 aa9.22□□□□□ -0.93
HLA-DMA-208ENST00000477541 TRAV23DV6A0A075B6W5 121 aa9.22□□□□□ -0.93
HLA-DMA-208ENST00000477541 HILS1P60008 231 aa9.22□□□□□ -0.93
HLA-DMA-208ENST00000477541 LINC00482Q8N8I6 264 aa9.22□□□□□ -0.93
HLA-DMA-208ENST00000477541 ANGP03950 147 aaKnown RBP9.21□□□□□ -0.94
HLA-DMA-208ENST00000477541 PRR3P79522 188 aaKnown RBP9.21□□□□□ -0.94
HLA-DMA-208ENST00000477541 FAM19A1Q7Z5A9 133 aa9.21□□□□□ -0.94
HLA-DMA-208ENST00000477541 MEGF8Q7Z7M0 2845 aa9.2□□□□□ -0.94
HLA-DMA-208ENST00000477541 SPAG11BQ08648 103 aa9.2□□□□□ -0.94
HLA-DMA-208ENST00000477541 CLPSL2Q6UWE3 100 aa9.2□□□□□ -0.94
HLA-DMA-208ENST00000477541 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.2□□□□□ -0.94
HLA-DMA-208ENST00000477541 LAMTOR3Q9UHA4 124 aa9.2□□□□□ -0.94
HLA-DMA-208ENST00000477541 KRTAP1-1Q07627 177 aa9.19□□□□□ -0.94
HLA-DMA-208ENST00000477541 LINC01547P58512 204 aaPredicted RBP9.19□□□□□ -0.94
HLA-DMA-208ENST00000477541 KLKP1Q107X0 134 aa9.19□□□□□ -0.94
HLA-DMA-208ENST00000477541 FAM236DA0A1B0GTK5 79 aa9.18□□□□□ -0.94
HLA-DMA-208ENST00000477541 FAM236CP0DP71 79 aa9.18□□□□□ -0.94
HLA-DMA-208ENST00000477541 NDUFC1O43677 76 aa9.17□□□□□ -0.94
HLA-DMA-208ENST00000477541 LELP1Q5T871 98 aa9.17□□□□□ -0.94
HLA-DMA-208ENST00000477541 Q6ZVQ6 151 aa9.17□□□□□ -0.94
HLA-DMA-208ENST00000477541 DIRC1Q969H9 104 aa9.17□□□□□ -0.94
HLA-DMA-208ENST00000477541 SERP1Q9Y6X1 66 aa9.17□□□□□ -0.94
HLA-DMA-208ENST00000477541 EPM2AB3EWF7 344 aa9.17□□□□□ -0.94
HLA-DMA-208ENST00000477541 PRR34Q9NV39 138 aa9.17□□□□□ -0.94
HLA-DMA-208ENST00000477541 C9orf116Q5BN46 136 aaPredicted RBP9.16□□□□□ -0.94
HLA-DMA-208ENST00000477541 C20orf197Q8N268 126 aa9.16□□□□□ -0.94
HLA-DMA-208ENST00000477541 Q8NDZ9 215 aa9.16□□□□□ -0.94
HLA-DMA-208ENST00000477541 TRBV7-4A0A0J9YYF1 115 aa9.15□□□□□ -0.94
HLA-DMA-208ENST00000477541 ATP5EP56381 51 aaPredicted RBP9.15□□□□□ -0.94
HLA-DMA-208ENST00000477541 KRTAP24-1Q3LI83 254 aa9.15□□□□□ -0.94
HLA-DMA-208ENST00000477541 WFDC9Q8NEX5 89 aa9.15□□□□□ -0.94
HLA-DMA-208ENST00000477541 APOC4P55056 127 aa9.14□□□□□ -0.95
HLA-DMA-208ENST00000477541 DAD1P61803 113 aa9.14□□□□□ -0.95
HLA-DMA-208ENST00000477541 UNQ6190/PRO20217Q6UXQ8 127 aa9.14□□□□□ -0.95
HLA-DMA-208ENST00000477541 Q6ZQY7 126 aa9.14□□□□□ -0.95
HLA-DMA-208ENST00000477541 IGLV10-54A0A075B6I4 117 aa9.14□□□□□ -0.95
HLA-DMA-208ENST00000477541 A0A096LPF7 62 aa9.13□□□□□ -0.95
HLA-DMA-208ENST00000477541 OXTP01178 125 aa9.13□□□□□ -0.95
HLA-DMA-208ENST00000477541 COX7BP24311 80 aa9.13□□□□□ -0.95
HLA-DMA-208ENST00000477541 H7BZZ5 65 aa9.12□□□□□ -0.95
HLA-DMA-208ENST00000477541 MIFP14174 115 aa9.12□□□□□ -0.95
HLA-DMA-208ENST00000477541 ELOF1P60002 83 aaKnown RBP9.12□□□□□ -0.95
HLA-DMA-208ENST00000477541 HAMPP81172 84 aa9.12□□□□□ -0.95
HLA-DMA-208ENST00000477541 ERC2-IT1O76042 136 aa9.11□□□□□ -0.95
HLA-DMA-208ENST00000477541 C10orf25Q5T742 122 aa9.11□□□□□ -0.95
HLA-DMA-208ENST00000477541 Q5XG85 94 aa9.11□□□□□ -0.95
HLA-DMA-208ENST00000477541 TGP01266 2768 aa9.11□□□□□ -0.95
HLA-DMA-208ENST00000477541 ZNF73O43830 326 aaPredicted RBP9.11□□□□□ -0.95
HLA-DMA-208ENST00000477541 PKD1L1Q8TDX9 2849 aa9.09□□□□□ -0.95
HLA-DMA-208ENST00000477541 F8WDY8 70 aa9.09□□□□□ -0.95
HLA-DMA-208ENST00000477541 SPART-AS1P0CW21 52 aa9.08□□□□□ -0.96
HLA-DMA-208ENST00000477541 C6orf48Q9UBA6 75 aa9.08□□□□□ -0.96
HLA-DMA-208ENST00000477541 M0R378 163 aa9.07□□□□□ -0.96
HLA-DMA-208ENST00000477541 EGFEM1PQ0D2K5 195 aa9.07□□□□□ -0.96
HLA-DMA-208ENST00000477541 MGAM2Q2M2H8 2515 aa9.06□□□□□ -0.96
HLA-DMA-208ENST00000477541 A0A1B0GW54 56 aa9.06□□□□□ -0.96
HLA-DMA-208ENST00000477541 Q8N3U1 123 aa9.06□□□□□ -0.96
HLA-DMA-208ENST00000477541 Q8NAQ8 132 aa9.06□□□□□ -0.96
HLA-DMA-208ENST00000477541 M0R2N4 97 aa9.05□□□□□ -0.96
HLA-DMA-208ENST00000477541 VPREB1P12018 145 aa9.05□□□□□ -0.96
HLA-DMA-208ENST00000477541 DEFB135Q30KP9 77 aa9.05□□□□□ -0.96
HLA-DMA-208ENST00000477541 MRAPQ8TCY5 172 aa9.05□□□□□ -0.96
HLA-DMA-208ENST00000477541 KLK12Q9UKR0 248 aa9.05□□□□□ -0.96
HLA-DMA-208ENST00000477541 CELA1Q9UNI1 258 aa9.05□□□□□ -0.96
HLA-DMA-208ENST00000477541 SMIM26A0A096LP01 95 aa9.04□□□□□ -0.96
HLA-DMA-208ENST00000477541 TRAV10A0A0B4J240 114 aa9.04□□□□□ -0.96
HLA-DMA-208ENST00000477541 H3BNG1 76 aa9.03□□□□□ -0.96
HLA-DMA-208ENST00000477541 C4orf26Q17RF5 130 aa9.02□□□□□ -0.96
HLA-DMA-208ENST00000477541 LINC00528Q8N1L1 170 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms