RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 RPL24P83731 157 aaKnown RBP9.38□□□□□ -0.91
CLDN11-204ENST00000477531 FAM19A2Q8N3H0 131 aa9.38□□□□□ -0.91
CLDN11-204ENST00000477531 ERG28Q9UKR5 140 aa9.38□□□□□ -0.91
CLDN11-204ENST00000477531 C11orf86A6NJI1 115 aa9.36□□□□□ -0.91
CLDN11-204ENST00000477531 LEPROTL1O95214 131 aa9.36□□□□□ -0.91
CLDN11-204ENST00000477531 CRYGAP11844 174 aa9.36□□□□□ -0.91
CLDN11-204ENST00000477531 ZNF625Q96I27 306 aaPredicted RBP9.36□□□□□ -0.91
CLDN11-204ENST00000477531 SND1-IT1Q9HBX3 110 aa9.36□□□□□ -0.91
CLDN11-204ENST00000477531 HSPB8Q9UJY1 196 aa9.36□□□□□ -0.91
CLDN11-204ENST00000477531 CHTOPQ9Y3Y2 248 aaKnown RBP9.36□□□□□ -0.91
CLDN11-204ENST00000477531 IGKV2-28A0A075B6P5 120 aa9.35□□□□□ -0.91
CLDN11-204ENST00000477531 IGKV2D-28P01615 120 aa9.35□□□□□ -0.91
CLDN11-204ENST00000477531 S100A6P06703 90 aa9.35□□□□□ -0.91
CLDN11-204ENST00000477531 IFI27L1Q96BM0 104 aa9.35□□□□□ -0.91
CLDN11-204ENST00000477531 LPAP08519 4548 aa9.33□□□□□ -0.92
CLDN11-204ENST00000477531 PRR4Q16378 134 aa9.33□□□□□ -0.92
CLDN11-204ENST00000477531 TYMSOSQ8TAI1 123 aa9.33□□□□□ -0.92
CLDN11-204ENST00000477531 VPREB1P12018 145 aa9.32□□□□□ -0.92
CLDN11-204ENST00000477531 LINC00158P58513 81 aa9.32□□□□□ -0.92
CLDN11-204ENST00000477531 TRAV12-1A0A0B4J245 112 aa9.31□□□□□ -0.92
CLDN11-204ENST00000477531 FABP4P15090 132 aa9.31□□□□□ -0.92
CLDN11-204ENST00000477531 A0A087X002 238 aa9.3□□□□□ -0.92
CLDN11-204ENST00000477531 TSPAN13O95857 204 aa9.3□□□□□ -0.92
CLDN11-204ENST00000477531 FAM19A1Q7Z5A9 133 aa9.3□□□□□ -0.92
CLDN11-204ENST00000477531 KRTAP13-1Q8IUC0 172 aa9.3□□□□□ -0.92
CLDN11-204ENST00000477531 MAP1LC3CQ9BXW4 147 aa9.3□□□□□ -0.92
CLDN11-204ENST00000477531 RNF213Q63HN8 5207 aa9.29□□□□□ -0.92
CLDN11-204ENST00000477531 TMEM223A0PJW6 202 aa9.29□□□□□ -0.92
CLDN11-204ENST00000477531 S100A2P29034 98 aa9.28□□□□□ -0.92
CLDN11-204ENST00000477531 TMEM126AQ9H061 195 aa9.28□□□□□ -0.92
CLDN11-204ENST00000477531 TMEM238C9JI98 176 aa9.27□□□□□ -0.93
CLDN11-204ENST00000477531 FAM229BQ4G0N7 80 aa9.27□□□□□ -0.93
CLDN11-204ENST00000477531 HIST3H2BBQ8N257 126 aa9.27□□□□□ -0.93
CLDN11-204ENST00000477531 ANAPC11Q9NYG5 84 aa9.27□□□□□ -0.93
CLDN11-204ENST00000477531 A0A0U1RRA0 63 aa9.26□□□□□ -0.93
CLDN11-204ENST00000477531 LINC00587B1AMM8 73 aa9.26□□□□□ -0.93
CLDN11-204ENST00000477531 PRLHP81277 87 aa9.26□□□□□ -0.93
CLDN11-204ENST00000477531 MEIG1Q5JSS6 88 aa9.26□□□□□ -0.93
CLDN11-204ENST00000477531 IGKV2D-26A0A0A0MRZ7 120 aa9.25□□□□□ -0.93
CLDN11-204ENST00000477531 H0Y8G0 127 aa9.25□□□□□ -0.93
CLDN11-204ENST00000477531 SYS1-DBNDD2H3BUS1 97 aa9.24□□□□□ -0.93
CLDN11-204ENST00000477531 M0R378 163 aa9.24□□□□□ -0.93
CLDN11-204ENST00000477531 SNRPEP62304 92 aaKnown RBP9.24□□□□□ -0.93
CLDN11-204ENST00000477531 HERV-K104P63124 156 aa9.24□□□□□ -0.93
CLDN11-204ENST00000477531 C5orf52A6NGY3 159 aa9.23□□□□□ -0.93
CLDN11-204ENST00000477531 SMIM13P0DJ93 91 aa9.23□□□□□ -0.93
CLDN11-204ENST00000477531 PLNP26678 52 aa9.23□□□□□ -0.93
CLDN11-204ENST00000477531 PET117Q6UWS5 81 aa9.23□□□□□ -0.93
CLDN11-204ENST00000477531 Q8NDZ9 215 aa9.23□□□□□ -0.93
CLDN11-204ENST00000477531 BOD1L2Q8IYS8 172 aa9.22□□□□□ -0.93
CLDN11-204ENST00000477531 HIST1H2BLQ99880 126 aa9.22□□□□□ -0.93
CLDN11-204ENST00000477531 HIGD2AQ9BW72 106 aa9.22□□□□□ -0.93
CLDN11-204ENST00000477531 NDUFA12Q9UI09 145 aa9.22□□□□□ -0.93
CLDN11-204ENST00000477531 MYMXA0A1B0GTQ4 84 aa9.21□□□□□ -0.94
CLDN11-204ENST00000477531 C3orf79P0CE67 100 aa9.21□□□□□ -0.94
CLDN11-204ENST00000477531 KRTAP13-2Q52LG2 175 aa9.21□□□□□ -0.94
CLDN11-204ENST00000477531 LINC00304Q8N9R0 145 aa9.21□□□□□ -0.94
CLDN11-204ENST00000477531 C20orf202A1L168 122 aa9.2□□□□□ -0.94
CLDN11-204ENST00000477531 DPM2O94777 84 aa9.2□□□□□ -0.94
CLDN11-204ENST00000477531 AKR1D1P51857 326 aa9.2□□□□□ -0.94
CLDN11-204ENST00000477531 KRTDAPP60985 99 aa9.2□□□□□ -0.94
CLDN11-204ENST00000477531 MIR7-3HGQ8N6C7 128 aa9.2□□□□□ -0.94
CLDN11-204ENST00000477531 PLEKHB2Q96CS7 222 aa9.2□□□□□ -0.94
CLDN11-204ENST00000477531 IGKCP01834 107 aa9.19□□□□□ -0.94
CLDN11-204ENST00000477531 S100A12P80511 92 aa9.19□□□□□ -0.94
CLDN11-204ENST00000477531 LINC01545Q5VT33 79 aa9.19□□□□□ -0.94
CLDN11-204ENST00000477531 TMA7Q9Y2S6 64 aaKnown RBP9.19□□□□□ -0.94
CLDN11-204ENST00000477531 PRYO14603 147 aa9.18□□□□□ -0.94
CLDN11-204ENST00000477531 NCR3O14931 201 aa9.17□□□□□ -0.94
CLDN11-204ENST00000477531 HERVK_113P61574 105 aa9.17□□□□□ -0.94
CLDN11-204ENST00000477531 PMCHL2Q9BQD1 86 aa9.17□□□□□ -0.94
CLDN11-204ENST00000477531 ZNF706Q9Y5V0 76 aaPredicted RBP9.17□□□□□ -0.94
CLDN11-204ENST00000477531 LEPROTO15243 131 aa9.16□□□□□ -0.94
CLDN11-204ENST00000477531 CTAG1AP78358 180 aa9.16□□□□□ -0.94
CLDN11-204ENST00000477531 ETDCA0A1B0GVM5 59 aa9.15□□□□□ -0.94
CLDN11-204ENST00000477531 LINC00337Q8N6G1 96 aa9.14□□□□□ -0.95
CLDN11-204ENST00000477531 KCNQ1DNQ9H478 68 aa9.14□□□□□ -0.95
CLDN11-204ENST00000477531 SPRR4Q96PI1 79 aa9.13□□□□□ -0.95
CLDN11-204ENST00000477531 J3QQQ9 107 aa9.12□□□□□ -0.95
CLDN11-204ENST00000477531 LGALS3P17931 250 aaKnown RBP9.12□□□□□ -0.95
CLDN11-204ENST00000477531 NMUP48645 174 aa9.12□□□□□ -0.95
CLDN11-204ENST00000477531 C4orf48Q5BLP8 95 aa9.12□□□□□ -0.95
CLDN11-204ENST00000477531 SPAG11AQ6PDA7 123 aa9.12□□□□□ -0.95
CLDN11-204ENST00000477531 C3orf22Q8N5N4 141 aa9.12□□□□□ -0.95
CLDN11-204ENST00000477531 RETNLBQ9BQ08 111 aa9.12□□□□□ -0.95
CLDN11-204ENST00000477531 MIEN1Q9BRT3 115 aa9.12□□□□□ -0.95
CLDN11-204ENST00000477531 TRBV10-3A0A0K0K1G6 114 aa9.11□□□□□ -0.95
CLDN11-204ENST00000477531 SPRR1AP35321 89 aa9.11□□□□□ -0.95
CLDN11-204ENST00000477531 TSPEAR-AS2P59090 65 aa9.11□□□□□ -0.95
CLDN11-204ENST00000477531 SMCR5Q8TEV8 140 aa9.1□□□□□ -0.95
CLDN11-204ENST00000477531 DAND5Q8N907 189 aa9.09□□□□□ -0.95
CLDN11-204ENST00000477531 LOC107984156A0A0G2JMH3 177 aa9.08□□□□□ -0.96
CLDN11-204ENST00000477531 TRBV10-2A0A0K0K1G8 114 aa9.08□□□□□ -0.96
CLDN11-204ENST00000477531 E9PLD3 99 aa9.08□□□□□ -0.96
CLDN11-204ENST00000477531 SCGB1D1O95968 90 aa9.08□□□□□ -0.96
CLDN11-204ENST00000477531 DDTP30046 118 aa9.08□□□□□ -0.96
CLDN11-204ENST00000477531 ARL17AQ8IVW1 177 aa9.08□□□□□ -0.96
CLDN11-204ENST00000477531 IGLV7-46A0A075B6I9 117 aa9.07□□□□□ -0.96
CLDN11-204ENST00000477531 A0A0U1RQV1 116 aa9.07□□□□□ -0.96
CLDN11-204ENST00000477531 KRTAP4-16G5E9R7 235 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms