RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 SND1-IT1Q9HBX3 110 aa4.48□□□□□ -1.69
LDB3-206ENST00000477489 DYNC2H1Q8NCM8 4307 aaKnown RBP4.47□□□□□ -1.69
LDB3-206ENST00000477489 IGLV10-54A0A075B6I4 117 aa4.47□□□□□ -1.69
LDB3-206ENST00000477489 NUPR2A6NF83 97 aa4.47□□□□□ -1.69
LDB3-206ENST00000477489 J3QR89 54 aa4.47□□□□□ -1.69
LDB3-206ENST00000477489 PRB2P02812 416 aaPredicted RBP4.47□□□□□ -1.69
LDB3-206ENST00000477489 RPL13AP40429 203 aaKnown RBP4.47□□□□□ -1.69
LDB3-206ENST00000477489 RPL28P46779 137 aaKnown RBP4.47□□□□□ -1.69
LDB3-206ENST00000477489 DAND5Q8N907 189 aa4.47□□□□□ -1.69
LDB3-206ENST00000477489 CARD19Q96LW7 228 aa4.47□□□□□ -1.69
LDB3-206ENST00000477489 NAA38Q9BRA0 125 aaKnown RBP4.47□□□□□ -1.69
LDB3-206ENST00000477489 CBY1Q9Y3M2 126 aa4.47□□□□□ -1.69
LDB3-206ENST00000477489 TRBV10-2A0A0K0K1G8 114 aa4.46□□□□□ -1.7
LDB3-206ENST00000477489 H0YGX0 51 aa4.46□□□□□ -1.7
LDB3-206ENST00000477489 H3BMG7 143 aa4.46□□□□□ -1.7
LDB3-206ENST00000477489 ZNF561-AS1K7EIQ3 104 aa4.46□□□□□ -1.7
LDB3-206ENST00000477489 TRIAP1O43715 76 aa4.46□□□□□ -1.7
LDB3-206ENST00000477489 RNF151Q2KHN1 245 aa4.46□□□□□ -1.7
LDB3-206ENST00000477489 PRO0461Q9UI25 63 aa4.46□□□□□ -1.7
LDB3-206ENST00000477489 LINC00588Q9Y4M8 146 aa4.46□□□□□ -1.7
LDB3-206ENST00000477489 RYR2Q92736 4967 aa4.46□□□□□ -1.7
LDB3-206ENST00000477489 TENM3Q9P273 2699 aa4.46□□□□□ -1.7
LDB3-206ENST00000477489 SACSQ9NZJ4 4579 aa4.45□□□□□ -1.7
LDB3-206ENST00000477489 A0A1B0GX51 115 aa4.45□□□□□ -1.7
LDB3-206ENST00000477489 H3BT86 120 aa4.45□□□□□ -1.7
LDB3-206ENST00000477489 LST1O00453 97 aa4.45□□□□□ -1.7
LDB3-206ENST00000477489 TCL1BO95988 128 aa4.45□□□□□ -1.7
LDB3-206ENST00000477489 TRACP01848 142 aa4.45□□□□□ -1.7
LDB3-206ENST00000477489 PFN2P35080 140 aa4.45□□□□□ -1.7
LDB3-206ENST00000477489 IGKV2-28A0A075B6P5 120 aa4.44□□□□□ -1.7
LDB3-206ENST00000477489 A0A0U1RRA0 63 aa4.44□□□□□ -1.7
LDB3-206ENST00000477489 H7C2G1 150 aa4.44□□□□□ -1.7
LDB3-206ENST00000477489 IGKV2D-28P01615 120 aa4.44□□□□□ -1.7
LDB3-206ENST00000477489 NPC2P61916 151 aa4.44□□□□□ -1.7
LDB3-206ENST00000477489 OCIAD2Q56VL3 154 aa4.44□□□□□ -1.7
LDB3-206ENST00000477489 C2orf82Q6UX34 121 aa4.44□□□□□ -1.7
LDB3-206ENST00000477489 CAMK2N2Q96S95 79 aa4.44□□□□□ -1.7
LDB3-206ENST00000477489 TMEM126AQ9H061 195 aa4.44□□□□□ -1.7
LDB3-206ENST00000477489 APLNQ9ULZ1 77 aa4.44□□□□□ -1.7
LDB3-206ENST00000477489 HUWE1Q7Z6Z7 4374 aaKnown RBP4.44□□□□□ -1.7
LDB3-206ENST00000477489 HYDINQ4G0P3 5121 aa4.43□□□□□ -1.7
LDB3-206ENST00000477489 IGKV2D-24A0A075B6R9 120 aa4.43□□□□□ -1.7
LDB3-206ENST00000477489 TLX1NBP0CAT3 122 aa4.43□□□□□ -1.7
LDB3-206ENST00000477489 LINC01620Q4KN68 170 aa4.43□□□□□ -1.7
LDB3-206ENST00000477489 TTC32Q5I0X7 151 aa4.43□□□□□ -1.7
LDB3-206ENST00000477489 TEN1Q86WV5 123 aa4.43□□□□□ -1.7
LDB3-206ENST00000477489 LINC00337Q8N6G1 96 aa4.43□□□□□ -1.7
LDB3-206ENST00000477489 C15orf56Q8N910 161 aa4.43□□□□□ -1.7
LDB3-206ENST00000477489 WWC2-AS2Q96NR7 200 aa4.43□□□□□ -1.7
LDB3-206ENST00000477489 PKIGQ9Y2B9 76 aa4.43□□□□□ -1.7
LDB3-206ENST00000477489 DNAH1Q9P2D7 4330 aa4.42□□□□□ -1.7
LDB3-206ENST00000477489 NDUFC2-KCTD14E9PQ53 114 aa4.42□□□□□ -1.7
LDB3-206ENST00000477489 SLC25A20O43772 301 aa4.42□□□□□ -1.7
LDB3-206ENST00000477489 SNCGO76070 127 aa4.42□□□□□ -1.7
LDB3-206ENST00000477489 UNQ6190/PRO20217Q6UXQ8 127 aa4.42□□□□□ -1.7
LDB3-206ENST00000477489 C6orf48Q9UBA6 75 aa4.42□□□□□ -1.7
LDB3-206ENST00000477489 DNAH9Q9NYC9 4486 aa4.41□□□□□ -1.7
LDB3-206ENST00000477489 C9JAW5 83 aa4.41□□□□□ -1.7
LDB3-206ENST00000477489 H3BQ85 93 aa4.41□□□□□ -1.7
LDB3-206ENST00000477489 SYCNQ0VAF6 134 aa4.41□□□□□ -1.7
LDB3-206ENST00000477489 WFDC2Q14508 124 aa4.41□□□□□ -1.7
LDB3-206ENST00000477489 C14orf177Q52M58 125 aa4.41□□□□□ -1.7
LDB3-206ENST00000477489 ANKRD29Q8N6D5 301 aa4.41□□□□□ -1.7
LDB3-206ENST00000477489 PPDPFLQ8WWR9 84 aa4.41□□□□□ -1.7
LDB3-206ENST00000477489 C10orf25Q5T742 122 aa4.4□□□□□ -1.71
LDB3-206ENST00000477489 UBE2DNLQ8IWF7 75 aa4.4□□□□□ -1.71
LDB3-206ENST00000477489 C6orf223Q8N319 242 aa4.4□□□□□ -1.71
LDB3-206ENST00000477489 SMIM11BQ8TCY0 68 aa4.4□□□□□ -1.71
LDB3-206ENST00000477489 STAB2Q8WWQ8 2551 aa4.4□□□□□ -1.71
LDB3-206ENST00000477489 TRBV7-6A0A0J9YX20 115 aa4.39□□□□□ -1.71
LDB3-206ENST00000477489 IGLV6-57P01721 117 aa4.39□□□□□ -1.71
LDB3-206ENST00000477489 ETDBQ3ZM63 59 aa4.39□□□□□ -1.71
LDB3-206ENST00000477489 S100A7L2Q5SY68 101 aa4.39□□□□□ -1.71
LDB3-206ENST00000477489 Q6ZRU5 148 aa4.39□□□□□ -1.71
LDB3-206ENST00000477489 Q8N1X5 172 aa4.39□□□□□ -1.71
LDB3-206ENST00000477489 OR13C6PQ8NH95 151 aa4.39□□□□□ -1.71
LDB3-206ENST00000477489 TENM2Q9NT68 2774 aa4.38□□□□□ -1.71
LDB3-206ENST00000477489 COL7A1Q02388 2944 aa4.38□□□□□ -1.71
LDB3-206ENST00000477489 USP17L23D6RBM5 183 aa4.38□□□□□ -1.71
LDB3-206ENST00000477489 M0R378 163 aa4.38□□□□□ -1.71
LDB3-206ENST00000477489 DNAL4O96015 105 aa4.38□□□□□ -1.71
LDB3-206ENST00000477489 HIGD2BQ4VC39 106 aa4.38□□□□□ -1.71
LDB3-206ENST00000477489 C9orf116Q5BN46 136 aaPredicted RBP4.38□□□□□ -1.71
LDB3-206ENST00000477489 Q9HAA7 133 aa4.38□□□□□ -1.71
LDB3-206ENST00000477489 IGLV5-37A0A075B6J1 123 aa4.37□□□□□ -1.71
LDB3-206ENST00000477489 VPREB1P12018 145 aa4.37□□□□□ -1.71
LDB3-206ENST00000477489 CNBPP62633 177 aaKnown RBP4.37□□□□□ -1.71
LDB3-206ENST00000477489 CLEC2BQ92478 149 aa4.37□□□□□ -1.71
LDB3-206ENST00000477489 LINC00167Q96N53 147 aa4.37□□□□□ -1.71
LDB3-206ENST00000477489 HERC2O95714 4834 aa4.37□□□□□ -1.71
LDB3-206ENST00000477489 LOC107984640A0A0U1RRK4 108 aa4.36□□□□□ -1.71
LDB3-206ENST00000477489 FAM240AA0A1B0GVK7 77 aa4.36□□□□□ -1.71
LDB3-206ENST00000477489 INAFM2P0DMQ5 153 aa4.36□□□□□ -1.71
LDB3-206ENST00000477489 C21orf62-AS1Q17RA5 79 aa4.36□□□□□ -1.71
LDB3-206ENST00000477489 LINC00526Q96FQ7 95 aa4.36□□□□□ -1.71
LDB3-206ENST00000477489 PCLOQ9Y6V0 5065 aa4.35□□□□□ -1.71
LDB3-206ENST00000477489 TRAV23DV6A0A075B6W5 121 aa4.35□□□□□ -1.71
LDB3-206ENST00000477489 NBDYA0A0U1RRE5 68 aa4.35□□□□□ -1.71
LDB3-206ENST00000477489 ACYP1P07311 99 aa4.35□□□□□ -1.71
LDB3-206ENST00000477489 DIRC1Q969H9 104 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms