RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 AKR1D1P51857 326 aa2.27□□□□□ -2.05
UBR3-209ENST00000477461 HERVK_113P63121 156 aa2.27□□□□□ -2.05
UBR3-209ENST00000477461 C1orf134Q5TEV5 83 aa2.27□□□□□ -2.05
UBR3-209ENST00000477461 ENHOQ6UWT2 76 aa2.27□□□□□ -2.05
UBR3-209ENST00000477461 LINC00173Q6ZV60 143 aa2.27□□□□□ -2.05
UBR3-209ENST00000477461 LINC00469Q8N7U9 141 aa2.27□□□□□ -2.05
UBR3-209ENST00000477461 OR10D4PQ8NGN7 298 aa2.27□□□□□ -2.05
UBR3-209ENST00000477461 AMELXQ99217 191 aa2.27□□□□□ -2.05
UBR3-209ENST00000477461 HIST1H2BLQ99880 126 aa2.27□□□□□ -2.05
UBR3-209ENST00000477461 CHAC1Q9BUX1 264 aa2.27□□□□□ -2.05
UBR3-209ENST00000477461 CST9LQ9H4G1 147 aa2.27□□□□□ -2.05
UBR3-209ENST00000477461 IGKV2-28A0A075B6P5 120 aa2.26□□□□□ -2.05
UBR3-209ENST00000477461 A0A0J9YXV3 536 aa2.26□□□□□ -2.05
UBR3-209ENST00000477461 TINCRA0A1B0GVN0 87 aa2.26□□□□□ -2.05
UBR3-209ENST00000477461 HSBP1L1C9JCN9 74 aa2.26□□□□□ -2.05
UBR3-209ENST00000477461 COX7A2LO14548 114 aa2.26□□□□□ -2.05
UBR3-209ENST00000477461 DPM2O94777 84 aa2.26□□□□□ -2.05
UBR3-209ENST00000477461 IGKV2D-28P01615 120 aa2.26□□□□□ -2.05
UBR3-209ENST00000477461 IGKCP01834 107 aa2.26□□□□□ -2.05
UBR3-209ENST00000477461 IGLC3P0DOY3 106 aa2.26□□□□□ -2.05
UBR3-209ENST00000477461 PLNP26678 52 aa2.26□□□□□ -2.05
UBR3-209ENST00000477461 TMEM170BQ5T4T1 132 aa2.26□□□□□ -2.05
UBR3-209ENST00000477461 C5orf38Q86SI9 138 aa2.26□□□□□ -2.05
UBR3-209ENST00000477461 MRPL35Q9NZE8 188 aaKnown RBP2.26□□□□□ -2.05
UBR3-209ENST00000477461 DNAH3Q8TD57 4116 aa2.26□□□□□ -2.05
UBR3-209ENST00000477461 TGP01266 2768 aa2.26□□□□□ -2.05
UBR3-209ENST00000477461 CMYA5Q8N3K9 4069 aa2.25□□□□□ -2.05
UBR3-209ENST00000477461 IGHV1-58A0A0C4DH39 117 aa2.25□□□□□ -2.05
UBR3-209ENST00000477461 LRCOL1A6NCL2 159 aa2.25□□□□□ -2.05
UBR3-209ENST00000477461 C11orf86A6NJI1 115 aa2.25□□□□□ -2.05
UBR3-209ENST00000477461 COX6A2Q02221 97 aa2.25□□□□□ -2.05
UBR3-209ENST00000477461 LINC01545Q5VT33 79 aa2.25□□□□□ -2.05
UBR3-209ENST00000477461 FAM19A3Q7Z5A8 133 aa2.25□□□□□ -2.05
UBR3-209ENST00000477461 SPATA12Q7Z6I5 190 aa2.25□□□□□ -2.05
UBR3-209ENST00000477461 PCP2Q8IVA1 136 aa2.25□□□□□ -2.05
UBR3-209ENST00000477461 ORAOV1Q8WV07 137 aa2.25□□□□□ -2.05
UBR3-209ENST00000477461 PMCHL2Q9BQD1 86 aa2.25□□□□□ -2.05
UBR3-209ENST00000477461 TOMM7Q9P0U1 55 aa2.25□□□□□ -2.05
UBR3-209ENST00000477461 COL7A1Q02388 2944 aa2.24□□□□□ -2.05
UBR3-209ENST00000477461 IGHV3-64A0A075B6Q5 118 aa2.24□□□□□ -2.05
UBR3-209ENST00000477461 IGHV3OR16-9A0A0B4J2B5 98 aa2.24□□□□□ -2.05
UBR3-209ENST00000477461 LECT2O14960 151 aa2.24□□□□□ -2.05
UBR3-209ENST00000477461 SPINK8P0C7L1 97 aa2.24□□□□□ -2.05
UBR3-209ENST00000477461 ZNF22P17026 224 aaPredicted RBP2.24□□□□□ -2.05
UBR3-209ENST00000477461 LGALS3P17931 250 aaKnown RBP2.24□□□□□ -2.05
UBR3-209ENST00000477461 CKS1BP61024 79 aa2.24□□□□□ -2.05
UBR3-209ENST00000477461 S100A12P80511 92 aa2.24□□□□□ -2.05
UBR3-209ENST00000477461 SPAG11BQ08648 103 aa2.24□□□□□ -2.05
UBR3-209ENST00000477461 ATOH7Q8N100 152 aa2.24□□□□□ -2.05
UBR3-209ENST00000477461 COX7B2Q8TF08 81 aa2.24□□□□□ -2.05
UBR3-209ENST00000477461 PLEKHB2Q96CS7 222 aa2.24□□□□□ -2.05
UBR3-209ENST00000477461 CDKN2A-AS1Q9UH64 79 aa2.24□□□□□ -2.05
UBR3-209ENST00000477461 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.23□□□□□ -2.05
UBR3-209ENST00000477461 TMEM223A0PJW6 202 aa2.23□□□□□ -2.05
UBR3-209ENST00000477461 NDUFA1O15239 70 aa2.23□□□□□ -2.05
UBR3-209ENST00000477461 LEPROTO15243 131 aa2.23□□□□□ -2.05
UBR3-209ENST00000477461 CXCL5P42830 114 aa2.23□□□□□ -2.05
UBR3-209ENST00000477461 JOSD1Q15040 202 aaPredicted RBP2.23□□□□□ -2.05
UBR3-209ENST00000477461 KRTAP26-1Q6PEX3 210 aa2.23□□□□□ -2.05
UBR3-209ENST00000477461 LINC00336Q6ZUF6 198 aa2.23□□□□□ -2.05
UBR3-209ENST00000477461 CAMK2N2Q96S95 79 aa2.23□□□□□ -2.05
UBR3-209ENST00000477461 VAMP8Q9BV40 100 aa2.23□□□□□ -2.05
UBR3-209ENST00000477461 PKIGQ9Y2B9 76 aa2.23□□□□□ -2.05
UBR3-209ENST00000477461 A0A087WTM6 91 aa2.22□□□□□ -2.05
UBR3-209ENST00000477461 GVQW2A0A096LPI5 108 aaPredicted RBP2.22□□□□□ -2.05
UBR3-209ENST00000477461 MYMXA0A1B0GTQ4 84 aa2.22□□□□□ -2.05
UBR3-209ENST00000477461 J3QQQ9 107 aa2.22□□□□□ -2.05
UBR3-209ENST00000477461 SYCNQ0VAF6 134 aa2.22□□□□□ -2.05
UBR3-209ENST00000477461 SPATA45Q537H7 98 aa2.22□□□□□ -2.05
UBR3-209ENST00000477461 PYY3Q5JQD4 70 aa2.22□□□□□ -2.05
UBR3-209ENST00000477461 MEIG1Q5JSS6 88 aa2.22□□□□□ -2.05
UBR3-209ENST00000477461 SFTA2Q6UW10 78 aa2.22□□□□□ -2.05
UBR3-209ENST00000477461 Q6ZRN7 208 aaPredicted RBP2.22□□□□□ -2.05
UBR3-209ENST00000477461 Q8IZM0 81 aa2.22□□□□□ -2.05
UBR3-209ENST00000477461 C15orf56Q8N910 161 aa2.22□□□□□ -2.05
UBR3-209ENST00000477461 LINC00526Q96FQ7 95 aa2.22□□□□□ -2.05
UBR3-209ENST00000477461 CARD19Q96LW7 228 aa2.22□□□□□ -2.05
UBR3-209ENST00000477461 NDUFA12Q9UI09 145 aa2.22□□□□□ -2.05
UBR3-209ENST00000477461 TRBV30A0A0K0K1B3 111 aa2.21□□□□□ -2.06
UBR3-209ENST00000477461 LOC105371267A0A1B0GV96 52 aa2.21□□□□□ -2.06
UBR3-209ENST00000477461 ZNF815PA8K554 130 aa2.21□□□□□ -2.06
UBR3-209ENST00000477461 LINC00587B1AMM8 73 aa2.21□□□□□ -2.06
UBR3-209ENST00000477461 SMIM6P0DI80 62 aa2.21□□□□□ -2.06
UBR3-209ENST00000477461 CIRBPQ14011 172 aaKnown RBP2.21□□□□□ -2.06
UBR3-209ENST00000477461 WFDC2Q14508 124 aa2.21□□□□□ -2.06
UBR3-209ENST00000477461 DEFB116Q30KQ4 102 aa2.21□□□□□ -2.06
UBR3-209ENST00000477461 C2orf82Q6UX34 121 aa2.21□□□□□ -2.06
UBR3-209ENST00000477461 SCGB1D4Q6XE38 83 aa2.21□□□□□ -2.06
UBR3-209ENST00000477461 Q8N814 137 aa2.21□□□□□ -2.06
UBR3-209ENST00000477461 TENM2Q9NT68 2774 aa2.21□□□□□ -2.06
UBR3-209ENST00000477461 DNHD1Q96M86 4753 aa2.2□□□□□ -2.06
UBR3-209ENST00000477461 IGKV2D-26A0A0A0MRZ7 120 aa2.2□□□□□ -2.06
UBR3-209ENST00000477461 LOC107984640A0A0U1RRK4 108 aa2.2□□□□□ -2.06
UBR3-209ENST00000477461 LINC00158P58513 81 aa2.2□□□□□ -2.06
UBR3-209ENST00000477461 CNBPP62633 177 aaKnown RBP2.2□□□□□ -2.06
UBR3-209ENST00000477461 RPL18AQ02543 176 aaKnown RBP2.2□□□□□ -2.06
UBR3-209ENST00000477461 SLC25A34Q6PIV7 304 aa2.2□□□□□ -2.06
UBR3-209ENST00000477461 UNQ6190/PRO20217Q6UXQ8 127 aa2.2□□□□□ -2.06
UBR3-209ENST00000477461 Q6ZRU5 148 aa2.2□□□□□ -2.06
UBR3-209ENST00000477461 ZNF625Q96I27 306 aaPredicted RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms