RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 COX17Q14061 63 aa11.16□□□□□ -0.62
EPHB4-204ENST00000477446 ETDBQ3ZM63 59 aa11.16□□□□□ -0.62
EPHB4-204ENST00000477446 CFAP161Q6P656 301 aa11.16□□□□□ -0.62
EPHB4-204ENST00000477446 KRTAP26-1Q6PEX3 210 aa11.16□□□□□ -0.62
EPHB4-204ENST00000477446 LINC01600Q96MT4 127 aa11.16□□□□□ -0.62
EPHB4-204ENST00000477446 TNP2Q05952 138 aa11.16□□□□□ -0.62
EPHB4-204ENST00000477446 RNF151Q2KHN1 245 aa11.16□□□□□ -0.62
EPHB4-204ENST00000477446 SMCPP49901 116 aaPredicted RBP11.15□□□□□ -0.62
EPHB4-204ENST00000477446 FOXI1Q12951 378 aa11.15□□□□□ -0.62
EPHB4-204ENST00000477446 LINC00336Q6ZUF6 198 aa11.15□□□□□ -0.62
EPHB4-204ENST00000477446 VPS25Q9BRG1 176 aa11.15□□□□□ -0.62
EPHB4-204ENST00000477446 SND1-IT1Q9HBX3 110 aa11.15□□□□□ -0.62
EPHB4-204ENST00000477446 KIAA0087Q14695 138 aa11.14□□□□□ -0.63
EPHB4-204ENST00000477446 LINC01620Q4KN68 170 aa11.14□□□□□ -0.63
EPHB4-204ENST00000477446 DNAH17Q9UFH2 4485 aa11.13□□□□□ -0.63
EPHB4-204ENST00000477446 SLC25A20O43772 301 aa11.13□□□□□ -0.63
EPHB4-204ENST00000477446 TEN1Q86WV5 123 aa11.12□□□□□ -0.63
EPHB4-204ENST00000477446 TRBV10-2A0A0K0K1G8 114 aa11.11□□□□□ -0.63
EPHB4-204ENST00000477446 LRCOL1A6NCL2 159 aa11.11□□□□□ -0.63
EPHB4-204ENST00000477446 GAGE12HA6NDE8 117 aa11.11□□□□□ -0.63
EPHB4-204ENST00000477446 C9JAW5 83 aa11.11□□□□□ -0.63
EPHB4-204ENST00000477446 MTURNQ8N3F0 131 aa11.11□□□□□ -0.63
EPHB4-204ENST00000477446 LST1O00453 97 aa11.11□□□□□ -0.63
EPHB4-204ENST00000477446 PFN2P35080 140 aa11.11□□□□□ -0.63
EPHB4-204ENST00000477446 A0A087WTM6 91 aa11.1□□□□□ -0.63
EPHB4-204ENST00000477446 ANKRD29Q8N6D5 301 aa11.1□□□□□ -0.63
EPHB4-204ENST00000477446 PPDPFLQ8WWR9 84 aa11.1□□□□□ -0.63
EPHB4-204ENST00000477446 LECT2O14960 151 aa11.09□□□□□ -0.63
EPHB4-204ENST00000477446 RPL28P46779 137 aaKnown RBP11.09□□□□□ -0.63
EPHB4-204ENST00000477446 FAT2Q9NYQ8 4349 aa11.09□□□□□ -0.63
EPHB4-204ENST00000477446 H3BT86 120 aa11.08□□□□□ -0.64
EPHB4-204ENST00000477446 C2orf82Q6UX34 121 aa11.07□□□□□ -0.64
EPHB4-204ENST00000477446 NDUFC2O95298 119 aa11.07□□□□□ -0.64
EPHB4-204ENST00000477446 IGKV2-28A0A075B6P5 120 aa11.06□□□□□ -0.64
EPHB4-204ENST00000477446 USP17L23D6RBM5 183 aa11.06□□□□□ -0.64
EPHB4-204ENST00000477446 IGKV2D-28P01615 120 aa11.06□□□□□ -0.64
EPHB4-204ENST00000477446 SPAG11BQ08648 103 aa11.06□□□□□ -0.64
EPHB4-204ENST00000477446 SVIPQ8NHG7 77 aa11.05□□□□□ -0.64
EPHB4-204ENST00000477446 CARD19Q96LW7 228 aa11.05□□□□□ -0.64
EPHB4-204ENST00000477446 GVQW2A0A096LPI5 108 aaPredicted RBP11.04□□□□□ -0.64
EPHB4-204ENST00000477446 A0A1B0GVY2 172 aa11.04□□□□□ -0.64
EPHB4-204ENST00000477446 TRACP01848 142 aa11.04□□□□□ -0.64
EPHB4-204ENST00000477446 LINC00337Q8N6G1 96 aa11.04□□□□□ -0.64
EPHB4-204ENST00000477446 CLEC2BQ92478 149 aa11.04□□□□□ -0.64
EPHB4-204ENST00000477446 H0YGX0 51 aa11.03□□□□□ -0.64
EPHB4-204ENST00000477446 Q8N814 137 aa11.03□□□□□ -0.64
EPHB4-204ENST00000477446 F8WDY8 70 aa11.02□□□□□ -0.65
EPHB4-204ENST00000477446 C15orf56Q8N910 161 aa11.02□□□□□ -0.65
EPHB4-204ENST00000477446 PKD1P98161 4303 aa11.01□□□□□ -0.65
EPHB4-204ENST00000477446 KRTAP10-2P60368 255 aa11□□□□□ -0.65
EPHB4-204ENST00000477446 C14orf177Q52M58 125 aa11□□□□□ -0.65
EPHB4-204ENST00000477446 NTN5Q8WTR8 489 aaPredicted RBP11□□□□□ -0.65
EPHB4-204ENST00000477446 FUSP35637 526 aaKnown RBP eCLIP10.99□□□□□ -0.65
EPHB4-204ENST00000477446 SMIM11BQ8TCY0 68 aa10.99□□□□□ -0.65
EPHB4-204ENST00000477446 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.99□□□□□ -0.65
EPHB4-204ENST00000477446 UNQ6190/PRO20217Q6UXQ8 127 aa10.99□□□□□ -0.65
EPHB4-204ENST00000477446 OR13C6PQ8NH95 151 aa10.99□□□□□ -0.65
EPHB4-204ENST00000477446 HIGD2BQ4VC39 106 aa10.98□□□□□ -0.65
EPHB4-204ENST00000477446 DNAH11Q96DT5 4516 aa10.97□□□□□ -0.65
EPHB4-204ENST00000477446 ZNF561-AS1K7EIQ3 104 aa10.97□□□□□ -0.65
EPHB4-204ENST00000477446 C2orf48Q96LS8 159 aa10.97□□□□□ -0.65
EPHB4-204ENST00000477446 TMEM126AQ9H061 195 aa10.97□□□□□ -0.65
EPHB4-204ENST00000477446 HECTD4Q9Y4D8 3996 aa10.96□□□□□ -0.65
EPHB4-204ENST00000477446 EPPK1P58107 5090 aaKnown RBP10.95□□□□□ -0.66
EPHB4-204ENST00000477446 C9orf116Q5BN46 136 aaPredicted RBP10.94□□□□□ -0.66
EPHB4-204ENST00000477446 C10orf25Q5T742 122 aa10.94□□□□□ -0.66
EPHB4-204ENST00000477446 LINC00526Q96FQ7 95 aa10.94□□□□□ -0.66
EPHB4-204ENST00000477446 SIGMAR1Q99720 223 aa10.94□□□□□ -0.66
EPHB4-204ENST00000477446 IGLV5-52A0A0A0MRZ9 124 aa10.93□□□□□ -0.66
EPHB4-204ENST00000477446 A0A1B0GX51 115 aa10.93□□□□□ -0.66
EPHB4-204ENST00000477446 SLPIP03973 132 aa10.93□□□□□ -0.66
EPHB4-204ENST00000477446 CAMK2N2Q96S95 79 aa10.92□□□□□ -0.66
EPHB4-204ENST00000477446 DNAL4O96015 105 aa10.91□□□□□ -0.66
EPHB4-204ENST00000477446 BAALC-AS2P0C853 105 aa10.91□□□□□ -0.66
EPHB4-204ENST00000477446 C6orf48Q9UBA6 75 aa10.91□□□□□ -0.66
EPHB4-204ENST00000477446 CNBPP62633 177 aaKnown RBP10.9□□□□□ -0.66
EPHB4-204ENST00000477446 FAM218AQ96MZ4 157 aa10.9□□□□□ -0.66
EPHB4-204ENST00000477446 BIRC6Q9NR09 4857 aa10.9□□□□□ -0.66
EPHB4-204ENST00000477446 PKHD1P08F94 4074 aa10.9□□□□□ -0.66
EPHB4-204ENST00000477446 TEX49A0A1B0GTD5 131 aa10.89□□□□□ -0.67
EPHB4-204ENST00000477446 SNCGO76070 127 aa10.89□□□□□ -0.67
EPHB4-204ENST00000477446 C16orf90A8MZG2 172 aa10.88□□□□□ -0.67
EPHB4-204ENST00000477446 S100A7L2Q5SY68 101 aa10.88□□□□□ -0.67
EPHB4-204ENST00000477446 C9orf163Q8N9P6 203 aa10.87□□□□□ -0.67
EPHB4-204ENST00000477446 PCP4P48539 62 aa10.86□□□□□ -0.67
EPHB4-204ENST00000477446 SYCNQ0VAF6 134 aa10.86□□□□□ -0.67
EPHB4-204ENST00000477446 CDIP1Q9H305 208 aa10.86□□□□□ -0.67
EPHB4-204ENST00000477446 DNAH5Q8TE73 4624 aa10.86□□□□□ -0.67
EPHB4-204ENST00000477446 PRR3P79522 188 aaKnown RBP10.86□□□□□ -0.67
EPHB4-204ENST00000477446 Q6ZRU5 148 aa10.86□□□□□ -0.67
EPHB4-204ENST00000477446 FAM240AA0A1B0GVK7 77 aa10.85□□□□□ -0.67
EPHB4-204ENST00000477446 SCGB1A1P11684 91 aa10.85□□□□□ -0.67
EPHB4-204ENST00000477446 A0A087WYN8 130 aa10.84□□□□□ -0.67
EPHB4-204ENST00000477446 NDUFC2-KCTD14E9PQ53 114 aa10.84□□□□□ -0.67
EPHB4-204ENST00000477446 IGLV6-57P01721 117 aa10.84□□□□□ -0.67
EPHB4-204ENST00000477446 KRTAP10-1P60331 282 aa10.84□□□□□ -0.67
EPHB4-204ENST00000477446 NCR3O14931 201 aa10.83□□□□□ -0.68
EPHB4-204ENST00000477446 INAFM2P0DMQ5 153 aa10.83□□□□□ -0.68
EPHB4-204ENST00000477446 ACYP1P07311 99 aa10.82□□□□□ -0.68
EPHB4-204ENST00000477446 LINC00167Q96N53 147 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms