RNA–Protein interactions for RNA: ENST00000477442.6

SRSF3-203, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 5

Gene SRSF3, Length 1,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-203ENST00000477442 IGKV2D-26A0A0A0MRZ7 120 aa7.56□□□□□ -1.2
SRSF3-203ENST00000477442 COX19Q49B96 90 aa7.56□□□□□ -1.2
SRSF3-203ENST00000477442 COMMD7Q86VX2 200 aa7.56□□□□□ -1.2
SRSF3-203ENST00000477442 HBDP02042 147 aa7.55□□□□□ -1.2
SRSF3-203ENST00000477442 LINC00614P0C842 121 aa7.55□□□□□ -1.2
SRSF3-203ENST00000477442 TMEM170BQ5T4T1 132 aa7.55□□□□□ -1.2
SRSF3-203ENST00000477442 PLEKHB2Q96CS7 222 aa7.55□□□□□ -1.2
SRSF3-203ENST00000477442 A0A0U1RQV1 116 aa7.54□□□□□ -1.2
SRSF3-203ENST00000477442 A0A0U1RRA0 63 aa7.54□□□□□ -1.2
SRSF3-203ENST00000477442 RPL24P83731 157 aaKnown RBP7.54□□□□□ -1.2
SRSF3-203ENST00000477442 BAGE3Q86Y29 109 aa7.54□□□□□ -1.2
SRSF3-203ENST00000477442 MUC17Q685J3 4493 aa7.53□□□□□ -1.2
SRSF3-203ENST00000477442 IGLV7-46A0A075B6I9 117 aa7.53□□□□□ -1.2
SRSF3-203ENST00000477442 COX17Q14061 63 aa7.53□□□□□ -1.2
SRSF3-203ENST00000477442 C10orf91Q5T1B1 145 aa7.53□□□□□ -1.2
SRSF3-203ENST00000477442 LCE2AQ5TA79 106 aaPredicted RBP7.53□□□□□ -1.2
SRSF3-203ENST00000477442 CBLN2Q8IUK8 224 aa7.53□□□□□ -1.2
SRSF3-203ENST00000477442 HIGD2AQ9BW72 106 aa7.53□□□□□ -1.2
SRSF3-203ENST00000477442 TRAPPC1Q9Y5R8 145 aa7.53□□□□□ -1.2
SRSF3-203ENST00000477442 LINC00158P58513 81 aa7.52□□□□□ -1.21
SRSF3-203ENST00000477442 RHEBQ15382 184 aa7.52□□□□□ -1.21
SRSF3-203ENST00000477442 KRTAP9-2Q9BYQ4 174 aa7.52□□□□□ -1.21
SRSF3-203ENST00000477442 CDIP1Q9H305 208 aa7.52□□□□□ -1.21
SRSF3-203ENST00000477442 TPRXLQ17RH7 258 aa7.51□□□□□ -1.21
SRSF3-203ENST00000477442 SPRR4Q96PI1 79 aa7.49□□□□□ -1.21
SRSF3-203ENST00000477442 CHTOPQ9Y3Y2 248 aaKnown RBP7.49□□□□□ -1.21
SRSF3-203ENST00000477442 TMEM223A0PJW6 202 aa7.48□□□□□ -1.21
SRSF3-203ENST00000477442 SMIM13P0DJ93 91 aa7.48□□□□□ -1.21
SRSF3-203ENST00000477442 NCR3O14931 201 aa7.47□□□□□ -1.21
SRSF3-203ENST00000477442 DAND5Q8N907 189 aa7.47□□□□□ -1.21
SRSF3-203ENST00000477442 PPDPFQ9H3Y8 114 aa7.47□□□□□ -1.21
SRSF3-203ENST00000477442 SFTA2Q6UW10 78 aa7.46□□□□□ -1.22
SRSF3-203ENST00000477442 BOD1L2Q8IYS8 172 aa7.45□□□□□ -1.22
SRSF3-203ENST00000477442 MIR7-3HGQ8N6C7 128 aa7.45□□□□□ -1.22
SRSF3-203ENST00000477442 APOC3P02656 99 aa7.44□□□□□ -1.22
SRSF3-203ENST00000477442 MEIG1Q5JSS6 88 aa7.44□□□□□ -1.22
SRSF3-203ENST00000477442 Q8NBF4 154 aa7.44□□□□□ -1.22
SRSF3-203ENST00000477442 SMCR5Q8TEV8 140 aa7.44□□□□□ -1.22
SRSF3-203ENST00000477442 IFI27L1Q96BM0 104 aa7.44□□□□□ -1.22
SRSF3-203ENST00000477442 TRAV12-1A0A0B4J245 112 aa7.43□□□□□ -1.22
SRSF3-203ENST00000477442 PRYO14603 147 aa7.43□□□□□ -1.22
SRSF3-203ENST00000477442 CTAG1AP78358 180 aa7.43□□□□□ -1.22
SRSF3-203ENST00000477442 TRBV10-3A0A0K0K1G6 114 aa7.42□□□□□ -1.22
SRSF3-203ENST00000477442 KRTAP4-16G5E9R7 235 aaPredicted RBP7.42□□□□□ -1.22
SRSF3-203ENST00000477442 LCE2BO14633 110 aa7.42□□□□□ -1.22
SRSF3-203ENST00000477442 ATP6V1G1O75348 118 aa7.42□□□□□ -1.22
SRSF3-203ENST00000477442 SPRR1AP35321 89 aa7.42□□□□□ -1.22
SRSF3-203ENST00000477442 SPAG11AQ6PDA7 123 aa7.42□□□□□ -1.22
SRSF3-203ENST00000477442 FAM19A2Q8N3H0 131 aa7.42□□□□□ -1.22
SRSF3-203ENST00000477442 YPEL4Q96NS1 127 aa7.42□□□□□ -1.22
SRSF3-203ENST00000477442 TSPEAR-AS2P59090 65 aa7.41□□□□□ -1.22
SRSF3-203ENST00000477442 LINC00337Q8N6G1 96 aa7.41□□□□□ -1.22
SRSF3-203ENST00000477442 KCNQ1DNQ9H478 68 aa7.41□□□□□ -1.22
SRSF3-203ENST00000477442 ZNF706Q9Y5V0 76 aaPredicted RBP7.41□□□□□ -1.22
SRSF3-203ENST00000477442 ETDCA0A1B0GVM5 59 aa7.4□□□□□ -1.22
SRSF3-203ENST00000477442 H0Y8G0 127 aa7.4□□□□□ -1.22
SRSF3-203ENST00000477442 ERC2-IT1O76042 136 aa7.4□□□□□ -1.22
SRSF3-203ENST00000477442 SMCPP49901 116 aaPredicted RBP7.4□□□□□ -1.22
SRSF3-203ENST00000477442 CHCHD1Q96BP2 118 aaKnown RBP7.4□□□□□ -1.22
SRSF3-203ENST00000477442 NDUFA12Q9UI09 145 aa7.4□□□□□ -1.22
SRSF3-203ENST00000477442 KRTAP13-3Q3SY46 172 aa7.39□□□□□ -1.23
SRSF3-203ENST00000477442 SNAPINO95295 136 aa7.38□□□□□ -1.23
SRSF3-203ENST00000477442 HERV-K104P63124 156 aa7.38□□□□□ -1.23
SRSF3-203ENST00000477442 GAGE2AQ6NT46 116 aa7.38□□□□□ -1.23
SRSF3-203ENST00000477442 FP248Q71RG6 208 aaPredicted RBP7.38□□□□□ -1.23
SRSF3-203ENST00000477442 LINC00483Q53H64 154 aa7.37□□□□□ -1.23
SRSF3-203ENST00000477442 SVBPQ8N300 66 aa7.37□□□□□ -1.23
SRSF3-203ENST00000477442 KRTAP4-1Q9BYQ7 146 aa7.37□□□□□ -1.23
SRSF3-203ENST00000477442 IGLV9-49A0A0B4J1Y8 123 aa7.36□□□□□ -1.23
SRSF3-203ENST00000477442 MYMXA0A1B0GTQ4 84 aa7.36□□□□□ -1.23
SRSF3-203ENST00000477442 B5MCH6 92 aa7.36□□□□□ -1.23
SRSF3-203ENST00000477442 HSBP1O75506 76 aa7.36□□□□□ -1.23
SRSF3-203ENST00000477442 MOBPQ13875 183 aa7.36□□□□□ -1.23
SRSF3-203ENST00000477442 NDUFA5Q16718 116 aa7.35□□□□□ -1.23
SRSF3-203ENST00000477442 Q9BRP9 147 aa7.35□□□□□ -1.23
SRSF3-203ENST00000477442 SPINK1P00995 79 aa7.34□□□□□ -1.23
SRSF3-203ENST00000477442 DDTP30046 118 aa7.34□□□□□ -1.23
SRSF3-203ENST00000477442 LINC00310P59036 64 aa7.34□□□□□ -1.23
SRSF3-203ENST00000477442 PMCHL2Q9BQD1 86 aa7.34□□□□□ -1.23
SRSF3-203ENST00000477442 LEPROTO15243 131 aa7.33□□□□□ -1.24
SRSF3-203ENST00000477442 ASB16-AS1Q495Z4 193 aa7.33□□□□□ -1.24
SRSF3-203ENST00000477442 MAP1LC3CQ9BXW4 147 aa7.33□□□□□ -1.24
SRSF3-203ENST00000477442 LINC00587B1AMM8 73 aa7.32□□□□□ -1.24
SRSF3-203ENST00000477442 EIF4EBP3O60516 100 aaPredicted RBP7.32□□□□□ -1.24
SRSF3-203ENST00000477442 Q8N377 158 aa7.32□□□□□ -1.24
SRSF3-203ENST00000477442 LOC107984156A0A0G2JMH3 177 aa7.31□□□□□ -1.24
SRSF3-203ENST00000477442 KRTAP9-6A0A140TA67 174 aa7.31□□□□□ -1.24
SRSF3-203ENST00000477442 J3QQQ9 107 aa7.31□□□□□ -1.24
SRSF3-203ENST00000477442 SERF1AO75920 110 aa7.31□□□□□ -1.24
SRSF3-203ENST00000477442 LEPROTL1O95214 131 aa7.31□□□□□ -1.24
SRSF3-203ENST00000477442 TRGC2P03986 189 aa7.31□□□□□ -1.24
SRSF3-203ENST00000477442 ARL17AQ8IVW1 177 aa7.31□□□□□ -1.24
SRSF3-203ENST00000477442 TRBV10-2A0A0K0K1G8 114 aa7.3□□□□□ -1.24
SRSF3-203ENST00000477442 FABP4P15090 132 aa7.3□□□□□ -1.24
SRSF3-203ENST00000477442 NPC2P61916 151 aa7.3□□□□□ -1.24
SRSF3-203ENST00000477442 SOSTDC1Q6X4U4 206 aa7.3□□□□□ -1.24
SRSF3-203ENST00000477442 Q6ZRX8 168 aa7.3□□□□□ -1.24
SRSF3-203ENST00000477442 IGLV6-57P01721 117 aa7.29□□□□□ -1.24
SRSF3-203ENST00000477442 S100A12P80511 92 aa7.29□□□□□ -1.24
SRSF3-203ENST00000477442 SSBP3-AS1Q7Z2R9 100 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms