RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-231ENST00000477334 ZNF815PA8K554 130 aa0.84□□□□□ -2.27
RBM39-231ENST00000477334 SYS1-DBNDD2H3BUS1 97 aa0.84□□□□□ -2.27
RBM39-231ENST00000477334 GYPAP02724 150 aa0.84□□□□□ -2.27
RBM39-231ENST00000477334 SSBP3-AS1Q7Z2R9 100 aa0.84□□□□□ -2.27
RBM39-231ENST00000477334 FDCSPQ8NFU4 85 aa0.84□□□□□ -2.27
RBM39-231ENST00000477334 ADGRL2O95490 1459 aa0.84□□□□□ -2.28
RBM39-231ENST00000477334 PRRC2CQ9Y520 2896 aaKnown RBP0.84□□□□□ -2.28
RBM39-231ENST00000477334 SCN7AQ01118 1682 aa0.84□□□□□ -2.28
RBM39-231ENST00000477334 TGP01266 2768 aa0.84□□□□□ -2.28
RBM39-231ENST00000477334 HIVEP3Q5T1R4 2406 aa0.84□□□□□ -2.28
RBM39-231ENST00000477334 NUP188Q5SRE5 1749 aa0.84□□□□□ -2.28
RBM39-231ENST00000477334 DCHS2Q6V1P9 2916 aa0.83□□□□□ -2.28
RBM39-231ENST00000477334 GPR98Q8WXG9 6306 aa0.83□□□□□ -2.28
RBM39-231ENST00000477334 MXRA5Q9NR99 2828 aa0.83□□□□□ -2.28
RBM39-231ENST00000477334 A0A0D9SFI3 127 aa0.83□□□□□ -2.28
RBM39-231ENST00000477334 TRBV7-7A0A0K0K1E9 115 aa0.83□□□□□ -2.28
RBM39-231ENST00000477334 IGF2RP11717 2491 aa0.83□□□□□ -2.28
RBM39-231ENST00000477334 NSD1Q96L73 2696 aaPredicted RBP0.83□□□□□ -2.28
RBM39-231ENST00000477334 CSMD2Q7Z408 3487 aa0.83□□□□□ -2.28
RBM39-231ENST00000477334 OTOGQ6ZRI0 2925 aa0.83□□□□□ -2.28
RBM39-231ENST00000477334 KCPQ6ZWJ8 1503 aa0.83□□□□□ -2.28
RBM39-231ENST00000477334 CHD7Q9P2D1 2997 aa0.83□□□□□ -2.28
RBM39-231ENST00000477334 FSIP2Q5CZC0 6907 aa0.83□□□□□ -2.28
RBM39-231ENST00000477334 ABCA8O94911 1581 aa0.83□□□□□ -2.28
RBM39-231ENST00000477334 ADGRG4Q8IZF6 3080 aa0.83□□□□□ -2.28
RBM39-231ENST00000477334 SBF2Q86WG5 1849 aa0.82□□□□□ -2.28
RBM39-231ENST00000477334 ZNF236Q9UL36 1845 aa0.82□□□□□ -2.28
RBM39-231ENST00000477334 EEA1Q15075 1411 aa0.82□□□□□ -2.28
RBM39-231ENST00000477334 LAMA5O15230 3695 aa0.82□□□□□ -2.28
RBM39-231ENST00000477334 TNRC6CQ9HCJ0 1690 aaKnown RBP0.82□□□□□ -2.28
RBM39-231ENST00000477334 MEGF8Q7Z7M0 2845 aa0.82□□□□□ -2.28
RBM39-231ENST00000477334 MARF1Q9Y4F3 1742 aaKnown RBP0.82□□□□□ -2.28
RBM39-231ENST00000477334 TRBV25-1A0A075B6N4 114 aa0.82□□□□□ -2.28
RBM39-231ENST00000477334 TMEM263Q8WUH6 116 aaKnown RBP0.82□□□□□ -2.28
RBM39-231ENST00000477334 SPCS1Q9Y6A9 102 aa0.82□□□□□ -2.28
RBM39-231ENST00000477334 MGAM2Q2M2H8 2515 aa0.82□□□□□ -2.28
RBM39-231ENST00000477334 TENM2Q9NT68 2774 aa0.82□□□□□ -2.28
RBM39-231ENST00000477334 DMXL2Q8TDJ6 3036 aa0.82□□□□□ -2.28
RBM39-231ENST00000477334 CEP170BQ9Y4F5 1589 aaPredicted RBP0.82□□□□□ -2.28
RBM39-231ENST00000477334 PREX2Q70Z35 1606 aa0.82□□□□□ -2.28
RBM39-231ENST00000477334 CROCC2H7BZ55 1655 aa0.81□□□□□ -2.28
RBM39-231ENST00000477334 MGAQ8IWI9 3026 aa0.81□□□□□ -2.28
RBM39-231ENST00000477334 FANCD2Q9BXW9 1451 aa0.81□□□□□ -2.28
RBM39-231ENST00000477334 CUBNO60494 3623 aa0.81□□□□□ -2.28
RBM39-231ENST00000477334 URB2Q14146 1524 aaKnown RBP0.81□□□□□ -2.28
RBM39-231ENST00000477334 MAGI3Q5TCQ9 1506 aa0.81□□□□□ -2.28
RBM39-231ENST00000477334 ABCC2Q92887 1545 aa0.81□□□□□ -2.28
RBM39-231ENST00000477334 TRBV6-1A0A0K0K1D8 114 aa0.81□□□□□ -2.28
RBM39-231ENST00000477334 ZNF720Q7Z2F6 126 aa0.81□□□□□ -2.28
RBM39-231ENST00000477334 LINC00472Q9H8W2 130 aa0.81□□□□□ -2.28
RBM39-231ENST00000477334 PLAC8Q9NZF1 115 aa0.81□□□□□ -2.28
RBM39-231ENST00000477334 CLTCQ00610 1675 aaKnown RBP0.81□□□□□ -2.28
RBM39-231ENST00000477334 LAMA1P25391 3075 aa0.8□□□□□ -2.28
RBM39-231ENST00000477334 SLIT1O75093 1534 aa0.8□□□□□ -2.28
RBM39-231ENST00000477334 MAP3K1Q13233 1512 aa0.8□□□□□ -2.28
RBM39-231ENST00000477334 CADP27708 2225 aa0.8□□□□□ -2.28
RBM39-231ENST00000477334 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.8□□□□□ -2.282e-12■■□□□ 13.7
RBM39-231ENST00000477334 KIF14Q15058 1648 aa0.8□□□□□ -2.28
RBM39-231ENST00000477334 USP32Q8NFA0 1604 aa0.8□□□□□ -2.28
RBM39-231ENST00000477334 C7orf77A4D0Y5 90 aa0.8□□□□□ -2.28
RBM39-231ENST00000477334 H7BZZ5 65 aa0.8□□□□□ -2.28
RBM39-231ENST00000477334 PRO0255Q9UI72 69 aa0.8□□□□□ -2.28
RBM39-231ENST00000477334 F8P00451 2351 aa0.8□□□□□ -2.28
RBM39-231ENST00000477334 COL4A6Q14031 1691 aa0.8□□□□□ -2.28
RBM39-231ENST00000477334 ZC3H13Q5T200 1668 aaKnown RBP0.8□□□□□ -2.28
RBM39-231ENST00000477334 POLR1AO95602 1720 aaPredicted RBP0.8□□□□□ -2.28
RBM39-231ENST00000477334 RYR2Q92736 4967 aa0.8□□□□□ -2.28
RBM39-231ENST00000477334 DOPEY2Q9Y3R5 2298 aa0.8□□□□□ -2.28
RBM39-231ENST00000477334 ABCA13Q86UQ4 5058 aa0.79□□□□□ -2.28
RBM39-231ENST00000477334 DOCK11Q5JSL3 2073 aa0.79□□□□□ -2.28
RBM39-231ENST00000477334 SCRIBQ14160 1630 aa0.79□□□□□ -2.28
RBM39-231ENST00000477334 CCDC180Q9P1Z9 1646 aa0.79□□□□□ -2.28
RBM39-231ENST00000477334 C3P01024 1663 aa0.79□□□□□ -2.28
RBM39-231ENST00000477334 PAPPA2Q9BXP8 1791 aa0.79□□□□□ -2.28
RBM39-231ENST00000477334 A0A087WVE0 104 aa0.79□□□□□ -2.28
RBM39-231ENST00000477334 H3BQF6 201 aa0.79□□□□□ -2.28
RBM39-231ENST00000477334 ETDBQ3ZM63 59 aa0.79□□□□□ -2.28
RBM39-231ENST00000477334 C10orf113Q5VZT2 155 aa0.79□□□□□ -2.28
RBM39-231ENST00000477334 SPRR4Q96PI1 79 aa0.79□□□□□ -2.28
RBM39-231ENST00000477334 CNFNQ9BYD5 112 aa0.79□□□□□ -2.28
RBM39-231ENST00000477334 APCP25054 2843 aa0.79□□□□□ -2.28
RBM39-231ENST00000477334 WNK1Q9H4A3 2382 aa0.79□□□□□ -2.28
RBM39-231ENST00000477334 HERC1Q15751 4861 aa0.79□□□□□ -2.28
RBM39-231ENST00000477334 ABCC3O15438 1527 aa0.79□□□□□ -2.28
RBM39-231ENST00000477334 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.79□□□□□ -2.28
RBM39-231ENST00000477334 PTPRQQ9UMZ3 2332 aa0.78□□□□□ -2.28
RBM39-231ENST00000477334 NBASA2RRP1 2371 aa0.78□□□□□ -2.28
RBM39-231ENST00000477334 TENM3Q9P273 2699 aa0.78□□□□□ -2.28
RBM39-231ENST00000477334 ITPR2Q14571 2701 aa0.78□□□□□ -2.28
RBM39-231ENST00000477334 PVALEFA0A1B0GWK0 134 aa0.78□□□□□ -2.28
RBM39-231ENST00000477334 SMIM11AP58511 58 aa0.78□□□□□ -2.28
RBM39-231ENST00000477334 LINC01600Q96MT4 127 aa0.78□□□□□ -2.28
RBM39-231ENST00000477334 MYO7AQ13402 2215 aa0.78□□□□□ -2.28
RBM39-231ENST00000477334 ATP10BO94823 1461 aa0.78□□□□□ -2.28
RBM39-231ENST00000477334 POLA1P09884 1462 aaPredicted RBP0.78□□□□□ -2.28
RBM39-231ENST00000477334 C1orf167Q5SNV9 1468 aa0.78□□□□□ -2.28
RBM39-231ENST00000477334 KDM3BQ7LBC6 1761 aa0.78□□□□□ -2.29
RBM39-231ENST00000477334 HERC2O95714 4834 aa0.77□□□□□ -2.29
RBM39-231ENST00000477334 SVEP1Q4LDE5 3571 aa0.77□□□□□ -2.29
RBM39-231ENST00000477334 CACNA1HO95180 2353 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms