RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 UBE2D3P61077 147 aa1.56□□□□□ -2.16
PTCD3-211ENST00000476215 UBE2D2P62837 147 aa1.56□□□□□ -2.16
PTCD3-211ENST00000476215 CCL20P78556 96 aa1.56□□□□□ -2.16
PTCD3-211ENST00000476215 Q0VG73 95 aa1.56□□□□□ -2.16
PTCD3-211ENST00000476215 ELOBQ15370 118 aa1.56□□□□□ -2.16
PTCD3-211ENST00000476215 AKR1C8PQ5T2L2 129 aa1.56□□□□□ -2.16
PTCD3-211ENST00000476215 ENHOQ6UWT2 76 aa1.56□□□□□ -2.16
PTCD3-211ENST00000476215 Q86TA4 180 aa1.56□□□□□ -2.16
PTCD3-211ENST00000476215 COA5Q86WW8 74 aa1.56□□□□□ -2.16
PTCD3-211ENST00000476215 BAGE2Q86Y30 109 aa1.56□□□□□ -2.16
PTCD3-211ENST00000476215 KCNRGQ8N5I3 272 aa1.56□□□□□ -2.16
PTCD3-211ENST00000476215 SFT2D1Q8WV19 159 aa1.56□□□□□ -2.16
PTCD3-211ENST00000476215 TCEAL7Q9BRU2 100 aa1.56□□□□□ -2.16
PTCD3-211ENST00000476215 MAP1LC3BQ9GZQ8 125 aa1.56□□□□□ -2.16
PTCD3-211ENST00000476215 TRBV6-8A0A0A6YYG3 113 aa1.55□□□□□ -2.16
PTCD3-211ENST00000476215 A0A0D9SG52 128 aa1.55□□□□□ -2.16
PTCD3-211ENST00000476215 HMSDA8MTL9 139 aa1.55□□□□□ -2.16
PTCD3-211ENST00000476215 UMAD1C9J7I0 102 aa1.55□□□□□ -2.16
PTCD3-211ENST00000476215 ARPC5O15511 151 aa1.55□□□□□ -2.16
PTCD3-211ENST00000476215 NPYP01303 97 aa1.55□□□□□ -2.16
PTCD3-211ENST00000476215 KRTAP10-4P60372 401 aaPredicted RBP1.55□□□□□ -2.16
PTCD3-211ENST00000476215 UBE2G1P62253 170 aa1.55□□□□□ -2.16
PTCD3-211ENST00000476215 FAM74A4Q5TZK3 123 aa1.55□□□□□ -2.16
PTCD3-211ENST00000476215 KRTAP26-1Q6PEX3 210 aa1.55□□□□□ -2.16
PTCD3-211ENST00000476215 DEFB104AQ8WTQ1 72 aa1.55□□□□□ -2.16
PTCD3-211ENST00000476215 LRP2P98164 4655 aa1.55□□□□□ -2.16
PTCD3-211ENST00000476215 RNF213Q63HN8 5207 aa1.54□□□□□ -2.16
PTCD3-211ENST00000476215 TRAV1-1A0A0B4J248 108 aa1.54□□□□□ -2.16
PTCD3-211ENST00000476215 A0A1B0GV50 99 aa1.54□□□□□ -2.16
PTCD3-211ENST00000476215 TINCRA0A1B0GVN0 87 aa1.54□□□□□ -2.16
PTCD3-211ENST00000476215 F2Z2F3 143 aa1.54□□□□□ -2.16
PTCD3-211ENST00000476215 M0QY20 66 aa1.54□□□□□ -2.16
PTCD3-211ENST00000476215 CXCL1P09341 107 aa1.54□□□□□ -2.16
PTCD3-211ENST00000476215 SMIM17P0DL12 118 aa1.54□□□□□ -2.16
PTCD3-211ENST00000476215 AKR1C3P42330 323 aa1.54□□□□□ -2.16
PTCD3-211ENST00000476215 RPL35P42766 123 aaKnown RBP1.54□□□□□ -2.16
PTCD3-211ENST00000476215 TMEM258P61165 79 aa1.54□□□□□ -2.16
PTCD3-211ENST00000476215 PKIAP61925 76 aa1.54□□□□□ -2.16
PTCD3-211ENST00000476215 RPL19P84098 196 aaKnown RBP1.54□□□□□ -2.16
PTCD3-211ENST00000476215 ZNF345Q14585 488 aa1.54□□□□□ -2.16
PTCD3-211ENST00000476215 MIAQ16674 131 aa1.54□□□□□ -2.16
PTCD3-211ENST00000476215 RGS21Q2M5E4 152 aa1.54□□□□□ -2.16
PTCD3-211ENST00000476215 TMEM97Q5BJF2 176 aa1.54□□□□□ -2.16
PTCD3-211ENST00000476215 SPANXN1Q5VSR9 72 aa1.54□□□□□ -2.16
PTCD3-211ENST00000476215 LINC00269Q8N2A0 174 aa1.54□□□□□ -2.16
PTCD3-211ENST00000476215 C9orf62Q8N4C0 152 aa1.54□□□□□ -2.16
PTCD3-211ENST00000476215 C9orf163Q8N9P6 203 aa1.54□□□□□ -2.16
PTCD3-211ENST00000476215 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.54□□□□□ -2.16
PTCD3-211ENST00000476215 OR10AG1Q8NH19 301 aa1.54□□□□□ -2.16
PTCD3-211ENST00000476215 FAM213BQ8TBF2 198 aa1.54□□□□□ -2.16
PTCD3-211ENST00000476215 DERL1Q9BUN8 251 aa1.54□□□□□ -2.16
PTCD3-211ENST00000476215 TTTY13Q9BZ97 58 aa1.54□□□□□ -2.16
PTCD3-211ENST00000476215 SPANXB1Q9NS25 103 aaPredicted RBP1.54□□□□□ -2.16
PTCD3-211ENST00000476215 TRBV25-1A0A075B6N4 114 aa1.53□□□□□ -2.16
PTCD3-211ENST00000476215 IGHV1-24A0A0C4DH33 117 aa1.53□□□□□ -2.16
PTCD3-211ENST00000476215 KANTRA0A1W2PQU2 76 aa1.53□□□□□ -2.16
PTCD3-211ENST00000476215 A8MUN3 132 aa1.53□□□□□ -2.16
PTCD3-211ENST00000476215 PDE6DO43924 150 aa1.53□□□□□ -2.16
PTCD3-211ENST00000476215 PFDN1O60925 122 aa1.53□□□□□ -2.16
PTCD3-211ENST00000476215 IFNA1P01562 189 aa1.53□□□□□ -2.16
PTCD3-211ENST00000476215 ANGP03950 147 aaKnown RBP1.53□□□□□ -2.16
PTCD3-211ENST00000476215 IGLC6P0CF74 106 aa1.53□□□□□ -2.16
PTCD3-211ENST00000476215 GNG4P50150 75 aa1.53□□□□□ -2.16
PTCD3-211ENST00000476215 RAB5CP51148 216 aa1.53□□□□□ -2.16
PTCD3-211ENST00000476215 RPS20P60866 119 aaKnown RBP1.53□□□□□ -2.16
PTCD3-211ENST00000476215 EIF5AP63241 154 aaKnown RBP1.53□□□□□ -2.16
PTCD3-211ENST00000476215 JOSD1Q15040 202 aaPredicted RBP1.53□□□□□ -2.16
PTCD3-211ENST00000476215 ZNF56Q15929 161 aa1.53□□□□□ -2.16
PTCD3-211ENST00000476215 IQCJQ1A5X6 159 aa1.53□□□□□ -2.16
PTCD3-211ENST00000476215 LYZL1Q6UWQ5 148 aa1.53□□□□□ -2.16
PTCD3-211ENST00000476215 FAM19A5Q7Z5A7 132 aaPredicted RBP1.53□□□□□ -2.16
PTCD3-211ENST00000476215 DPH3Q96FX2 82 aa1.53□□□□□ -2.16
PTCD3-211ENST00000476215 PACRGQ96M98 296 aaPredicted RBP1.53□□□□□ -2.16
PTCD3-211ENST00000476215 NAA38Q9BRA0 125 aaKnown RBP1.53□□□□□ -2.16
PTCD3-211ENST00000476215 MANBALQ9NQG1 85 aa1.53□□□□□ -2.16
PTCD3-211ENST00000476215 NIT2Q9NQR4 276 aa1.53□□□□□ -2.16
PTCD3-211ENST00000476215 MED9Q9NWA0 146 aa1.53□□□□□ -2.16
PTCD3-211ENST00000476215 GNG13Q9P2W3 67 aa1.53□□□□□ -2.16
PTCD3-211ENST00000476215 TRBV20OR9-2A0A075B6H5 130 aa1.52□□□□□ -2.17
PTCD3-211ENST00000476215 IGHV3-64A0A075B6Q5 118 aa1.52□□□□□ -2.17
PTCD3-211ENST00000476215 CRPP02741 224 aa1.52□□□□□ -2.17
PTCD3-211ENST00000476215 NKX2-5P52952 324 aaPredicted RBP1.52□□□□□ -2.17
PTCD3-211ENST00000476215 FOXA3P55318 350 aaPredicted RBP1.52□□□□□ -2.17
PTCD3-211ENST00000476215 RPL37AP61513 92 aaKnown RBP1.52□□□□□ -2.17
PTCD3-211ENST00000476215 CNBPP62633 177 aaKnown RBP1.52□□□□□ -2.17
PTCD3-211ENST00000476215 CIRBPQ14011 172 aaKnown RBP1.52□□□□□ -2.17
PTCD3-211ENST00000476215 EIF5AL1Q6IS14 154 aaKnown RBP1.52□□□□□ -2.17
PTCD3-211ENST00000476215 AP1S3Q96PC3 154 aa1.52□□□□□ -2.17
PTCD3-211ENST00000476215 BIN3Q9NQY0 253 aa1.52□□□□□ -2.17
PTCD3-211ENST00000476215 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.51□□□□□ -2.17
PTCD3-211ENST00000476215 NCR2O95944 276 aa1.51□□□□□ -2.17
PTCD3-211ENST00000476215 MGPP08493 103 aa1.51□□□□□ -2.17
PTCD3-211ENST00000476215 TRGC1P0CF51 173 aa1.51□□□□□ -2.17
PTCD3-211ENST00000476215 MT1HL1P0DM35 61 aa1.51□□□□□ -2.17
PTCD3-211ENST00000476215 BCL2P10415 239 aa1.51□□□□□ -2.17
PTCD3-211ENST00000476215 COX6A2Q02221 97 aa1.51□□□□□ -2.17
PTCD3-211ENST00000476215 COTL1Q14019 142 aa1.51□□□□□ -2.17
PTCD3-211ENST00000476215 CLPSL2Q6UWE3 100 aa1.51□□□□□ -2.17
PTCD3-211ENST00000476215 TEX261Q6UWH6 196 aa1.51□□□□□ -2.17
PTCD3-211ENST00000476215 SLC51BQ86UW2 128 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms