RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 DMXL1Q9Y485 3027 aa8.34□□□□□ -1.07
U2AF1-209ENST00000475639 CYSRT1A8MQ03 144 aa8.34□□□□□ -1.07
U2AF1-209ENST00000475639 EGFEM1PQ0D2K5 195 aa8.33□□□□□ -1.08
U2AF1-209ENST00000475639 PLA2G2AP14555 144 aa8.33□□□□□ -1.08
U2AF1-209ENST00000475639 M0R2N4 97 aa8.33□□□□□ -1.08
U2AF1-209ENST00000475639 RNASE3P12724 160 aaKnown RBP8.33□□□□□ -1.08
U2AF1-209ENST00000475639 PROK1P58294 105 aa8.33□□□□□ -1.08
U2AF1-209ENST00000475639 IGHV6-1A0A0B4J1U7 121 aa8.33□□□□□ -1.08
U2AF1-209ENST00000475639 A0A087WVE0 104 aa8.32□□□□□ -1.08
U2AF1-209ENST00000475639 CIRBP-AS1Q8TBR5 109 aa8.32□□□□□ -1.08
U2AF1-209ENST00000475639 Q5XG85 94 aa8.32□□□□□ -1.08
U2AF1-209ENST00000475639 SPTBN4Q9H254 2564 aa8.31□□□□□ -1.08
U2AF1-209ENST00000475639 Q6YL49 198 aa8.31□□□□□ -1.08
U2AF1-209ENST00000475639 IGF2RP11717 2491 aa8.31□□□□□ -1.08
U2AF1-209ENST00000475639 hDV103S1A0JD37 113 aa8.31□□□□□ -1.08
U2AF1-209ENST00000475639 TMEM254Q8TBM7 123 aa8.3□□□□□ -1.08
U2AF1-209ENST00000475639 DCHS2Q6V1P9 2916 aa8.3□□□□□ -1.08
U2AF1-209ENST00000475639 FSHBP01225 129 aa8.3□□□□□ -1.08
U2AF1-209ENST00000475639 ATMQ13315 3056 aa8.3□□□□□ -1.08
U2AF1-209ENST00000475639 H0Y9P7 68 aa8.3□□□□□ -1.08
U2AF1-209ENST00000475639 CHCHD7Q9BUK0 85 aa8.29□□□□□ -1.08
U2AF1-209ENST00000475639 LY6G6CO95867 125 aa8.29□□□□□ -1.08
U2AF1-209ENST00000475639 LIMD2Q9BT23 127 aa8.29□□□□□ -1.08
U2AF1-209ENST00000475639 FAM19A4Q96LR4 140 aa8.29□□□□□ -1.08
U2AF1-209ENST00000475639 A0A087WSZ3 146 aa8.29□□□□□ -1.08
U2AF1-209ENST00000475639 UNQ6190/PRO20217Q6UXQ8 127 aa8.28□□□□□ -1.08
U2AF1-209ENST00000475639 ZNF843Q8N446 348 aa8.28□□□□□ -1.08
U2AF1-209ENST00000475639 Q8N814 137 aa8.28□□□□□ -1.08
U2AF1-209ENST00000475639 C22orf24Q9Y442 160 aa8.28□□□□□ -1.08
U2AF1-209ENST00000475639 CDC42SE2Q9NRR3 84 aa8.28□□□□□ -1.08
U2AF1-209ENST00000475639 TRBV10-3A0A0K0K1G6 114 aa8.27□□□□□ -1.08
U2AF1-209ENST00000475639 LINC00575Q6W349 94 aa8.27□□□□□ -1.09
U2AF1-209ENST00000475639 PLA2G1BP04054 148 aaKnown RBP8.26□□□□□ -1.09
U2AF1-209ENST00000475639 SPAG11AQ6PDA7 123 aa8.26□□□□□ -1.09
U2AF1-209ENST00000475639 LINC00242Q5T6M2 205 aa8.25□□□□□ -1.09
U2AF1-209ENST00000475639 PRO0628Q9UI54 55 aa8.25□□□□□ -1.09
U2AF1-209ENST00000475639 LRBAP50851 2863 aa8.25□□□□□ -1.09
U2AF1-209ENST00000475639 KLLNB2CW77 178 aa8.25□□□□□ -1.09
U2AF1-209ENST00000475639 REG3GQ6UW15 175 aa8.24□□□□□ -1.09
U2AF1-209ENST00000475639 C6orf223Q8N319 242 aa8.24□□□□□ -1.09
U2AF1-209ENST00000475639 NUPR2A6NF83 97 aa8.24□□□□□ -1.09
U2AF1-209ENST00000475639 INAFM1C9JVW0 142 aa8.24□□□□□ -1.09
U2AF1-209ENST00000475639 Q8N6K4 173 aa8.24□□□□□ -1.09
U2AF1-209ENST00000475639 FAM104AQ969W3 186 aa8.24□□□□□ -1.09
U2AF1-209ENST00000475639 FLG2Q5D862 2391 aaPredicted RBP8.23□□□□□ -1.09
U2AF1-209ENST00000475639 A0A1B0GU69 56 aa8.23□□□□□ -1.09
U2AF1-209ENST00000475639 ZNF702PQ9H963 129 aa8.23□□□□□ -1.09
U2AF1-209ENST00000475639 Q8N2B8 174 aa8.23□□□□□ -1.09
U2AF1-209ENST00000475639 RETNLBQ9BQ08 111 aa8.22□□□□□ -1.09
U2AF1-209ENST00000475639 Q9BRP9 147 aa8.22□□□□□ -1.09
U2AF1-209ENST00000475639 ASH1LQ9NR48 2969 aaKnown RBP8.22□□□□□ -1.09
U2AF1-209ENST00000475639 HCG22E2RYF7 251 aa8.22□□□□□ -1.09
U2AF1-209ENST00000475639 SMIM1B2RUZ4 78 aa8.21□□□□□ -1.1
U2AF1-209ENST00000475639 C1orf64Q8NEQ6 169 aa8.21□□□□□ -1.1
U2AF1-209ENST00000475639 FAM218AQ96MZ4 157 aa8.21□□□□□ -1.1
U2AF1-209ENST00000475639 IGKV2D-30A0A075B6S6 120 aa8.2□□□□□ -1.1
U2AF1-209ENST00000475639 IGKV2-30P06310 120 aa8.2□□□□□ -1.1
U2AF1-209ENST00000475639 LINC01561Q8N1V8 128 aa8.2□□□□□ -1.1
U2AF1-209ENST00000475639 LINC01006Q8NI28 216 aa8.2□□□□□ -1.1
U2AF1-209ENST00000475639 FASNP49327 2511 aaKnown RBP8.2□□□□□ -1.1
U2AF1-209ENST00000475639 FHL2Q14192 279 aa8.19□□□□□ -1.1
U2AF1-209ENST00000475639 CXCL6P80162 114 aa8.19□□□□□ -1.1
U2AF1-209ENST00000475639 C9orf116Q5BN46 136 aaPredicted RBP8.18□□□□□ -1.1
U2AF1-209ENST00000475639 LINC01556Q5JQF7 62 aa8.18□□□□□ -1.1
U2AF1-209ENST00000475639 C9orf129Q5T035 196 aaKnown RBP8.18□□□□□ -1.1
U2AF1-209ENST00000475639 C10orf99Q6UWK7 81 aa8.18□□□□□ -1.1
U2AF1-209ENST00000475639 ATP11AUNQ6ZP68 121 aa8.17□□□□□ -1.1
U2AF1-209ENST00000475639 PRLHP81277 87 aa8.17□□□□□ -1.1
U2AF1-209ENST00000475639 LINC00336Q6ZUF6 198 aa8.16□□□□□ -1.1
U2AF1-209ENST00000475639 LINC00846Q9NV44 126 aa8.16□□□□□ -1.1
U2AF1-209ENST00000475639 KLK9Q2XQG4 91 aa8.16□□□□□ -1.1
U2AF1-209ENST00000475639 PRR3P79522 188 aaKnown RBP8.16□□□□□ -1.1
U2AF1-209ENST00000475639 A0A087WYN8 130 aa8.15□□□□□ -1.1
U2AF1-209ENST00000475639 DEFB116Q30KQ4 102 aa8.15□□□□□ -1.1
U2AF1-209ENST00000475639 F8WDY8 70 aa8.15□□□□□ -1.1
U2AF1-209ENST00000475639 ACYP2P14621 99 aa8.15□□□□□ -1.1
U2AF1-209ENST00000475639 Q8NA96 180 aa8.15□□□□□ -1.1
U2AF1-209ENST00000475639 BSNQ9UPA5 3926 aa8.15□□□□□ -1.1
U2AF1-209ENST00000475639 COX6A2Q02221 97 aa8.15□□□□□ -1.1
U2AF1-209ENST00000475639 IGLV5-52A0A0A0MRZ9 124 aa8.15□□□□□ -1.11
U2AF1-209ENST00000475639 C8orf87E5RJ46 101 aa8.15□□□□□ -1.11
U2AF1-209ENST00000475639 SPINT4Q6UDR6 99 aa8.15□□□□□ -1.11
U2AF1-209ENST00000475639 TP53AIP1Q9HCN2 124 aa8.14□□□□□ -1.11
U2AF1-209ENST00000475639 PRM2P04554 102 aa8.13□□□□□ -1.11
U2AF1-209ENST00000475639 LINC00337Q8N6G1 96 aa8.13□□□□□ -1.11
U2AF1-209ENST00000475639 PRORYQ9H606 182 aa8.13□□□□□ -1.11
U2AF1-209ENST00000475639 Q6ZTC4 211 aa8.13□□□□□ -1.11
U2AF1-209ENST00000475639 USP24Q9UPU5 2620 aa8.12□□□□□ -1.11
U2AF1-209ENST00000475639 C7orf65Q6ZTY9 151 aa8.12□□□□□ -1.11
U2AF1-209ENST00000475639 OXLD1Q5BKU9 147 aa8.12□□□□□ -1.11
U2AF1-209ENST00000475639 IGLV4-60A0A075B6I1 120 aa8.11□□□□□ -1.11
U2AF1-209ENST00000475639 C19orf84I3L1E1 186 aa8.11□□□□□ -1.11
U2AF1-209ENST00000475639 AKAP13Q12802 2813 aa8.1□□□□□ -1.11
U2AF1-209ENST00000475639 EPM2AB3EWF7 344 aa8.1□□□□□ -1.11
U2AF1-209ENST00000475639 ODF3L2Q3SX64 289 aa8.1□□□□□ -1.11
U2AF1-209ENST00000475639 EPG5Q9HCE0 2579 aa8.1□□□□□ -1.11
U2AF1-209ENST00000475639 BCE1O60756 84 aa8.09□□□□□ -1.11
U2AF1-209ENST00000475639 Q9UF83 564 aa8.09□□□□□ -1.11
U2AF1-209ENST00000475639 IGLV1-40P01703 118 aa8.09□□□□□ -1.11
U2AF1-209ENST00000475639 OBSCN-AS1Q96MR7 158 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms