RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 NTN5Q8WTR8 489 aaPredicted RBP4.67□□□□□ -1.66
SHQ1-207ENST00000475558 CDIP1Q9H305 208 aa4.67□□□□□ -1.66
SHQ1-207ENST00000475558 A4D1N5 150 aa4.66□□□□□ -1.66
SHQ1-207ENST00000475558 A6NDN8 102 aa4.66□□□□□ -1.66
SHQ1-207ENST00000475558 C16orf90A8MZG2 172 aa4.66□□□□□ -1.66
SHQ1-207ENST00000475558 SPAG11BQ08648 103 aa4.66□□□□□ -1.66
SHQ1-207ENST00000475558 SPANXDQ9BXN6 97 aa4.66□□□□□ -1.66
SHQ1-207ENST00000475558 Q9HAA7 133 aa4.66□□□□□ -1.66
SHQ1-207ENST00000475558 SPANXCQ9NY87 97 aa4.66□□□□□ -1.66
SHQ1-207ENST00000475558 LRP1BQ9NZR2 4599 aa4.66□□□□□ -1.66
SHQ1-207ENST00000475558 HERC1Q15751 4861 aa4.65□□□□□ -1.67
SHQ1-207ENST00000475558 LINC00158P58513 81 aa4.65□□□□□ -1.67
SHQ1-207ENST00000475558 CEND1Q8N111 149 aa4.65□□□□□ -1.67
SHQ1-207ENST00000475558 Q8N1X5 172 aa4.65□□□□□ -1.67
SHQ1-207ENST00000475558 CAMK2N2Q96S95 79 aa4.65□□□□□ -1.67
SHQ1-207ENST00000475558 LOC107984156A0A0G2JMH3 177 aa4.64□□□□□ -1.67
SHQ1-207ENST00000475558 SMIM13P0DJ93 91 aa4.64□□□□□ -1.67
SHQ1-207ENST00000475558 TSPEAR-AS2P59090 65 aa4.64□□□□□ -1.67
SHQ1-207ENST00000475558 SYCNQ0VAF6 134 aa4.64□□□□□ -1.67
SHQ1-207ENST00000475558 COL5A1-AS1Q5SY13 56 aa4.64□□□□□ -1.67
SHQ1-207ENST00000475558 C2orf91Q6ZV80 131 aa4.64□□□□□ -1.67
SHQ1-207ENST00000475558 ARL17AQ8IVW1 177 aa4.64□□□□□ -1.67
SHQ1-207ENST00000475558 C6orf223Q8N319 242 aa4.64□□□□□ -1.67
SHQ1-207ENST00000475558 ERG28Q9UKR5 140 aa4.64□□□□□ -1.67
SHQ1-207ENST00000475558 CBY1Q9Y3M2 126 aa4.64□□□□□ -1.67
SHQ1-207ENST00000475558 TLX1NBP0CAT3 122 aa4.63□□□□□ -1.67
SHQ1-207ENST00000475558 BVES-AS1Q5T3Y7 98 aa4.63□□□□□ -1.67
SHQ1-207ENST00000475558 TTTY13Q9BZ97 58 aa4.63□□□□□ -1.67
SHQ1-207ENST00000475558 APOBP04114 4563 aaKnown RBP4.62□□□□□ -1.67
SHQ1-207ENST00000475558 USP17L23D6RBM5 183 aa4.62□□□□□ -1.67
SHQ1-207ENST00000475558 TRAV13-2A0A0B4J235 113 aa4.61□□□□□ -1.67
SHQ1-207ENST00000475558 NDUFC2O95298 119 aa4.61□□□□□ -1.67
SHQ1-207ENST00000475558 HINT1P49773 126 aaPredicted RBP4.61□□□□□ -1.67
SHQ1-207ENST00000475558 CNBPP62633 177 aaKnown RBP4.61□□□□□ -1.67
SHQ1-207ENST00000475558 UNQ6190/PRO20217Q6UXQ8 127 aa4.61□□□□□ -1.67
SHQ1-207ENST00000475558 MUSTN1Q8IVN3 82 aa4.61□□□□□ -1.67
SHQ1-207ENST00000475558 C15orf56Q8N910 161 aa4.61□□□□□ -1.67
SHQ1-207ENST00000475558 LINC00308Q8TCZ7 52 aa4.61□□□□□ -1.67
SHQ1-207ENST00000475558 CARD19Q96LW7 228 aa4.61□□□□□ -1.67
SHQ1-207ENST00000475558 LITAFQ99732 161 aa4.61□□□□□ -1.67
SHQ1-207ENST00000475558 LINC00474Q9P2X8 69 aa4.61□□□□□ -1.67
SHQ1-207ENST00000475558 DMBT1Q9UGM3 2413 aaPredicted RBP4.61□□□□□ -1.67
SHQ1-207ENST00000475558 DNAH5Q8TE73 4624 aa4.6□□□□□ -1.67
SHQ1-207ENST00000475558 A0A0B4J2C4 111 aa4.6□□□□□ -1.67
SHQ1-207ENST00000475558 A0A1B0GWB2 263 aa4.6□□□□□ -1.67
SHQ1-207ENST00000475558 NDUFC2-KCTD14E9PQ53 114 aa4.6□□□□□ -1.67
SHQ1-207ENST00000475558 PFN2P35080 140 aa4.6□□□□□ -1.67
SHQ1-207ENST00000475558 ADAMTSL4-AS1Q5T5F5 129 aa4.6□□□□□ -1.67
SHQ1-207ENST00000475558 MIR7-3HGQ8N6C7 128 aa4.6□□□□□ -1.67
SHQ1-207ENST00000475558 RAB37Q96AX2 223 aa4.6□□□□□ -1.67
SHQ1-207ENST00000475558 LOC107984640A0A0U1RRK4 108 aa4.59□□□□□ -1.67
SHQ1-207ENST00000475558 BATFQ16520 125 aa4.59□□□□□ -1.67
SHQ1-207ENST00000475558 HIGD2BQ4VC39 106 aa4.59□□□□□ -1.67
SHQ1-207ENST00000475558 LYRM7Q5U5X0 104 aa4.59□□□□□ -1.67
SHQ1-207ENST00000475558 C2orf82Q6UX34 121 aa4.59□□□□□ -1.67
SHQ1-207ENST00000475558 SNHG12Q9BXW3 62 aa4.59□□□□□ -1.67
SHQ1-207ENST00000475558 PRO1854Q9UHT4 67 aa4.59□□□□□ -1.67
SHQ1-207ENST00000475558 TRBV10-2A0A0K0K1G8 114 aa4.58□□□□□ -1.68
SHQ1-207ENST00000475558 EPM2AB3EWF7 344 aa4.58□□□□□ -1.68
SHQ1-207ENST00000475558 SNCGO76070 127 aa4.58□□□□□ -1.68
SHQ1-207ENST00000475558 COX6CP09669 75 aa4.58□□□□□ -1.68
SHQ1-207ENST00000475558 Q6ZRN7 208 aaPredicted RBP4.58□□□□□ -1.68
SHQ1-207ENST00000475558 Q6ZRU5 148 aa4.58□□□□□ -1.68
SHQ1-207ENST00000475558 KRTAP1-5Q9BYS1 174 aa4.58□□□□□ -1.68
SHQ1-207ENST00000475558 SND1-IT1Q9HBX3 110 aa4.58□□□□□ -1.68
SHQ1-207ENST00000475558 C6orf48Q9UBA6 75 aa4.58□□□□□ -1.68
SHQ1-207ENST00000475558 PLA2G2DQ9UNK4 145 aa4.58□□□□□ -1.68
SHQ1-207ENST00000475558 A0A087WTM6 91 aa4.57□□□□□ -1.68
SHQ1-207ENST00000475558 A0A0U1RRA0 63 aa4.57□□□□□ -1.68
SHQ1-207ENST00000475558 LRCOL1A6NCL2 159 aa4.57□□□□□ -1.68
SHQ1-207ENST00000475558 CFC1BP0CG36 223 aa4.57□□□□□ -1.68
SHQ1-207ENST00000475558 CFC1P0CG37 223 aa4.57□□□□□ -1.68
SHQ1-207ENST00000475558 INAFM2P0DMQ5 153 aa4.57□□□□□ -1.68
SHQ1-207ENST00000475558 FXYD2P54710 66 aa4.57□□□□□ -1.68
SHQ1-207ENST00000475558 C10orf25Q5T742 122 aa4.57□□□□□ -1.68
SHQ1-207ENST00000475558 C9orf163Q8N9P6 203 aa4.57□□□□□ -1.68
SHQ1-207ENST00000475558 TMEM126AQ9H061 195 aa4.57□□□□□ -1.68
SHQ1-207ENST00000475558 NHP2Q9NX24 153 aaKnown RBP4.57□□□□□ -1.68
SHQ1-207ENST00000475558 C9orf118A6NHY6 69 aa4.56□□□□□ -1.68
SHQ1-207ENST00000475558 Q8N814 137 aa4.56□□□□□ -1.68
SHQ1-207ENST00000475558 M0R378 163 aa4.55□□□□□ -1.68
SHQ1-207ENST00000475558 KRTAP10-2P60368 255 aa4.55□□□□□ -1.68
SHQ1-207ENST00000475558 VAMP3Q15836 100 aa4.55□□□□□ -1.68
SHQ1-207ENST00000475558 LINC00526Q96FQ7 95 aa4.55□□□□□ -1.68
SHQ1-207ENST00000475558 TRBV20-1A0A075B6N2 111 aa4.54□□□□□ -1.68
SHQ1-207ENST00000475558 GAGE10A6NGK3 116 aa4.54□□□□□ -1.68
SHQ1-207ENST00000475558 H0YGX0 51 aa4.54□□□□□ -1.68
SHQ1-207ENST00000475558 SLPIP03973 132 aa4.54□□□□□ -1.68
SHQ1-207ENST00000475558 SCGB1C2P0DMR2 95 aa4.54□□□□□ -1.68
SHQ1-207ENST00000475558 C9orf116Q5BN46 136 aaPredicted RBP4.54□□□□□ -1.68
SHQ1-207ENST00000475558 S100A7L2Q5SY68 101 aa4.54□□□□□ -1.68
SHQ1-207ENST00000475558 DAND5Q8N907 189 aa4.54□□□□□ -1.68
SHQ1-207ENST00000475558 VPS13BQ7Z7G8 4022 aa4.53□□□□□ -1.68
SHQ1-207ENST00000475558 TAX1BP3O14907 124 aa4.53□□□□□ -1.68
SHQ1-207ENST00000475558 LECT2O14960 151 aa4.53□□□□□ -1.68
SHQ1-207ENST00000475558 FABP2P12104 132 aa4.53□□□□□ -1.68
SHQ1-207ENST00000475558 PSMB2P49721 201 aa4.53□□□□□ -1.68
SHQ1-207ENST00000475558 RPL18AQ02543 176 aaKnown RBP4.53□□□□□ -1.68
SHQ1-207ENST00000475558 GAGE2EQ4V326 116 aa4.53□□□□□ -1.68
SHQ1-207ENST00000475558 Q6ZRP5 223 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 406.7 ms