RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 RPL24P83731 157 aaKnown RBP10.13□□□□□ -0.79
CPSF3-203ENST00000475482 BATFQ16520 125 aa10.13□□□□□ -0.79
CPSF3-203ENST00000475482 HIGD2BQ4VC39 106 aa10.13□□□□□ -0.79
CPSF3-203ENST00000475482 LBHQ53QV2 105 aaPredicted RBP10.13□□□□□ -0.79
CPSF3-203ENST00000475482 C2orf82Q6UX34 121 aa10.13□□□□□ -0.79
CPSF3-203ENST00000475482 LITAFQ99732 161 aa10.13□□□□□ -0.79
CPSF3-203ENST00000475482 KRTAP3-3Q9BYR6 98 aa10.13□□□□□ -0.79
CPSF3-203ENST00000475482 KRTAP3-2Q9BYR7 98 aa10.13□□□□□ -0.79
CPSF3-203ENST00000475482 SNHG12Q9BXW3 62 aa10.12□□□□□ -0.79
CPSF3-203ENST00000475482 SMIM13P0DJ93 91 aa10.11□□□□□ -0.79
CPSF3-203ENST00000475482 INAFM2P0DMQ5 153 aa10.11□□□□□ -0.79
CPSF3-203ENST00000475482 PPDPFQ9H3Y8 114 aa10.11□□□□□ -0.79
CPSF3-203ENST00000475482 MYCBP2O75592 4640 aa10.11□□□□□ -0.79
CPSF3-203ENST00000475482 FAM229AH3BQW9 127 aa10.1□□□□□ -0.79
CPSF3-203ENST00000475482 PFN2P35080 140 aa10.1□□□□□ -0.79
CPSF3-203ENST00000475482 LINC01620Q4KN68 170 aa10.1□□□□□ -0.79
CPSF3-203ENST00000475482 ADAMTSL4-AS1Q5T5F5 129 aa10.1□□□□□ -0.79
CPSF3-203ENST00000475482 UNQ6190/PRO20217Q6UXQ8 127 aa10.1□□□□□ -0.79
CPSF3-203ENST00000475482 SYCNQ0VAF6 134 aa10.09□□□□□ -0.79
CPSF3-203ENST00000475482 COL5A1-AS1Q5SY13 56 aa10.09□□□□□ -0.79
CPSF3-203ENST00000475482 DMBT1Q9UGM3 2413 aaPredicted RBP10.09□□□□□ -0.79
CPSF3-203ENST00000475482 A0A0U1RRA0 63 aa10.08□□□□□ -0.8
CPSF3-203ENST00000475482 RNF151Q2KHN1 245 aa10.08□□□□□ -0.8
CPSF3-203ENST00000475482 MUSTN1Q8IVN3 82 aa10.08□□□□□ -0.8
CPSF3-203ENST00000475482 MIR7-3HGQ8N6C7 128 aa10.08□□□□□ -0.8
CPSF3-203ENST00000475482 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.07□□□□□ -0.8
CPSF3-203ENST00000475482 LINC00308Q8TCZ7 52 aa10.07□□□□□ -0.8
CPSF3-203ENST00000475482 LINC00526Q96FQ7 95 aa10.07□□□□□ -0.8
CPSF3-203ENST00000475482 HERC1Q15751 4861 aa10.07□□□□□ -0.8
CPSF3-203ENST00000475482 FXYD2P54710 66 aa10.06□□□□□ -0.8
CPSF3-203ENST00000475482 SCXQ7RTU7 201 aa10.06□□□□□ -0.8
CPSF3-203ENST00000475482 CARD19Q96LW7 228 aa10.06□□□□□ -0.8
CPSF3-203ENST00000475482 C10orf25Q5T742 122 aa10.05□□□□□ -0.8
CPSF3-203ENST00000475482 Q6ZRU5 148 aa10.05□□□□□ -0.8
CPSF3-203ENST00000475482 DAND5Q8N907 189 aa10.05□□□□□ -0.8
CPSF3-203ENST00000475482 C6orf48Q9UBA6 75 aa10.05□□□□□ -0.8
CPSF3-203ENST00000475482 NHP2Q9NX24 153 aaKnown RBP10.04□□□□□ -0.8
CPSF3-203ENST00000475482 A4D1N5 150 aa10.03□□□□□ -0.8
CPSF3-203ENST00000475482 NPC2P61916 151 aa10.03□□□□□ -0.8
CPSF3-203ENST00000475482 C9orf163Q8N9P6 203 aa10.03□□□□□ -0.8
CPSF3-203ENST00000475482 CIRBP-AS1Q8TBR5 109 aa10.03□□□□□ -0.8
CPSF3-203ENST00000475482 PKIGQ9Y2B9 76 aa10.03□□□□□ -0.8
CPSF3-203ENST00000475482 NDUFC2-KCTD14E9PQ53 114 aa10.02□□□□□ -0.81
CPSF3-203ENST00000475482 C9orf116Q5BN46 136 aaPredicted RBP10.02□□□□□ -0.81
CPSF3-203ENST00000475482 LINC00528Q8N1L1 170 aa10.02□□□□□ -0.81
CPSF3-203ENST00000475482 LOC107984156A0A0G2JMH3 177 aa10.01□□□□□ -0.81
CPSF3-203ENST00000475482 A0A1B0GWB2 263 aa10.01□□□□□ -0.81
CPSF3-203ENST00000475482 PLA2G1BP04054 148 aaKnown RBP10.01□□□□□ -0.81
CPSF3-203ENST00000475482 KRTAP10-4P60372 401 aaPredicted RBP10.01□□□□□ -0.81
CPSF3-203ENST00000475482 CNBPP62633 177 aaKnown RBP10.01□□□□□ -0.81
CPSF3-203ENST00000475482 ARL17AQ8IVW1 177 aa10.01□□□□□ -0.81
CPSF3-203ENST00000475482 RAB37Q96AX2 223 aa10.01□□□□□ -0.81
CPSF3-203ENST00000475482 A0A0B4J2C4 111 aa10□□□□□ -0.81
CPSF3-203ENST00000475482 SND1-IT1Q9HBX3 110 aa10□□□□□ -0.81
CPSF3-203ENST00000475482 TLX1NBP0CAT3 122 aa9.99□□□□□ -0.81
CPSF3-203ENST00000475482 SDIM1Q6ZPB5 146 aa9.99□□□□□ -0.81
CPSF3-203ENST00000475482 NDUFC2O95298 119 aa9.98□□□□□ -0.81
CPSF3-203ENST00000475482 CFC1BP0CG36 223 aa9.98□□□□□ -0.81
CPSF3-203ENST00000475482 CFC1P0CG37 223 aa9.98□□□□□ -0.81
CPSF3-203ENST00000475482 SOSTDC1Q6X4U4 206 aa9.98□□□□□ -0.81
CPSF3-203ENST00000475482 PRO1854Q9UHT4 67 aa9.98□□□□□ -0.81
CPSF3-203ENST00000475482 LOC107984640A0A0U1RRK4 108 aa9.97□□□□□ -0.81
CPSF3-203ENST00000475482 SLPIP03973 132 aa9.97□□□□□ -0.81
CPSF3-203ENST00000475482 TRAV13-2A0A0B4J235 113 aa9.96□□□□□ -0.82
CPSF3-203ENST00000475482 RPL18AQ02543 176 aaKnown RBP9.95□□□□□ -0.82
CPSF3-203ENST00000475482 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.95□□□□□ -0.82
CPSF3-203ENST00000475482 PANO1I0J062 215 aa9.94□□□□□ -0.82
CPSF3-203ENST00000475482 K7ERJ3 54 aa9.94□□□□□ -0.82
CPSF3-203ENST00000475482 EIF4EBP3O60516 100 aaPredicted RBP9.94□□□□□ -0.82
CPSF3-203ENST00000475482 LRP1Q07954 4544 aaKnown RBP9.94□□□□□ -0.82
CPSF3-203ENST00000475482 TAX1BP3O14907 124 aa9.93□□□□□ -0.82
CPSF3-203ENST00000475482 GAGE2EQ4V326 116 aa9.93□□□□□ -0.82
CPSF3-203ENST00000475482 Q6ZRP5 223 aa9.93□□□□□ -0.82
CPSF3-203ENST00000475482 GAGE2DQ9UEU5 116 aa9.93□□□□□ -0.82
CPSF3-203ENST00000475482 C9orf118A6NHY6 69 aa9.92□□□□□ -0.82
CPSF3-203ENST00000475482 KRTAP29-1A8MX34 341 aaPredicted RBP9.91□□□□□ -0.82
CPSF3-203ENST00000475482 Q1RN00 199 aa9.91□□□□□ -0.82
CPSF3-203ENST00000475482 XAGE1AQ9HD64 81 aa9.91□□□□□ -0.82
CPSF3-203ENST00000475482 TRBV10-2A0A0K0K1G8 114 aa9.9□□□□□ -0.82
CPSF3-203ENST00000475482 LYRM7Q5U5X0 104 aa9.9□□□□□ -0.82
CPSF3-203ENST00000475482 FAT3Q8TDW7 4589 aa9.89□□□□□ -0.83
CPSF3-203ENST00000475482 RPL13AP40429 203 aaKnown RBP9.89□□□□□ -0.83
CPSF3-203ENST00000475482 GAGE2BQ13066 116 aa9.89□□□□□ -0.83
CPSF3-203ENST00000475482 PLA2G2DQ9UNK4 145 aa9.89□□□□□ -0.83
CPSF3-203ENST00000475482 H3BUT2 72 aa9.88□□□□□ -0.83
CPSF3-203ENST00000475482 OR13C6PQ8NH95 151 aa9.88□□□□□ -0.83
CPSF3-203ENST00000475482 LINC00474Q9P2X8 69 aa9.88□□□□□ -0.83
CPSF3-203ENST00000475482 CBY1Q9Y3M2 126 aa9.88□□□□□ -0.83
CPSF3-203ENST00000475482 PKHD1L1Q86WI1 4243 aa9.87□□□□□ -0.83
CPSF3-203ENST00000475482 IGKV2-28A0A075B6P5 120 aa9.87□□□□□ -0.83
CPSF3-203ENST00000475482 H7C2G1 150 aa9.87□□□□□ -0.83
CPSF3-203ENST00000475482 TSPAN13O95857 204 aa9.87□□□□□ -0.83
CPSF3-203ENST00000475482 IGKV2D-28P01615 120 aa9.87□□□□□ -0.83
CPSF3-203ENST00000475482 S100A7L2Q5SY68 101 aa9.87□□□□□ -0.83
CPSF3-203ENST00000475482 SPACA4Q8TDM5 124 aa9.87□□□□□ -0.83
CPSF3-203ENST00000475482 TMEM126AQ9H061 195 aa9.87□□□□□ -0.83
CPSF3-203ENST00000475482 COX6CP09669 75 aa9.86□□□□□ -0.83
CPSF3-203ENST00000475482 FABP2P12104 132 aa9.86□□□□□ -0.83
CPSF3-203ENST00000475482 PSMB2P49721 201 aa9.86□□□□□ -0.83
CPSF3-203ENST00000475482 C9orf129Q5T035 196 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms