RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 VPS13CQ709C8 3753 aa3.32□□□□□ -1.88
NPHP3-206ENST00000474871 PIEZO2Q9H5I5 2752 aa3.32□□□□□ -1.88
NPHP3-206ENST00000474871 C19orf84I3L1E1 186 aa3.32□□□□□ -1.88
NPHP3-206ENST00000474871 IGHV3-30-3P0DP02 117 aa3.32□□□□□ -1.88
NPHP3-206ENST00000474871 LINC00476Q8WZB0 136 aa3.32□□□□□ -1.88
NPHP3-206ENST00000474871 A0A1W2PPR1 153 aa3.32□□□□□ -1.88
NPHP3-206ENST00000474871 SCXQ7RTU7 201 aa3.32□□□□□ -1.88
NPHP3-206ENST00000474871 C1orf64Q8NEQ6 169 aa3.32□□□□□ -1.88
NPHP3-206ENST00000474871 WFDC9Q8NEX5 89 aa3.32□□□□□ -1.88
NPHP3-206ENST00000474871 IGHV3-38A0A0C4DH36 116 aa3.32□□□□□ -1.88
NPHP3-206ENST00000474871 CXCL6P80162 114 aa3.32□□□□□ -1.88
NPHP3-206ENST00000474871 PRRC2AP48634 2157 aaKnown RBP3.32□□□□□ -1.88
NPHP3-206ENST00000474871 DCHS2Q6V1P9 2916 aa3.31□□□□□ -1.88
NPHP3-206ENST00000474871 ABCA12Q86UK0 2595 aa3.31□□□□□ -1.88
NPHP3-206ENST00000474871 C11orf86A6NJI1 115 aa3.31□□□□□ -1.88
NPHP3-206ENST00000474871 F8VRH5 84 aa3.31□□□□□ -1.88
NPHP3-206ENST00000474871 K7EIM0 57 aa3.31□□□□□ -1.88
NPHP3-206ENST00000474871 SPAG11BQ08648 103 aa3.31□□□□□ -1.88
NPHP3-206ENST00000474871 CDC42SE1Q9NRR8 79 aa3.31□□□□□ -1.88
NPHP3-206ENST00000474871 TRAV23DV6A0A075B6W5 121 aa3.31□□□□□ -1.88
NPHP3-206ENST00000474871 ODF3BA8MYP8 253 aa3.31□□□□□ -1.88
NPHP3-206ENST00000474871 I3L2K1 104 aa3.31□□□□□ -1.88
NPHP3-206ENST00000474871 ZCCHC13Q8WW36 166 aaKnown RBP3.31□□□□□ -1.88
NPHP3-206ENST00000474871 ZNF625Q96I27 306 aaPredicted RBP3.31□□□□□ -1.88
NPHP3-206ENST00000474871 RETNLBQ9BQ08 111 aa3.31□□□□□ -1.88
NPHP3-206ENST00000474871 KLK12Q9UKR0 248 aa3.31□□□□□ -1.88
NPHP3-206ENST00000474871 NBPF19A0A087WUL8 3843 aa3.31□□□□□ -1.88
NPHP3-206ENST00000474871 LOC101927531A0A1B0GV80 90 aa3.31□□□□□ -1.88
NPHP3-206ENST00000474871 H0YGX0 51 aa3.31□□□□□ -1.88
NPHP3-206ENST00000474871 LRBAP50851 2863 aa3.3□□□□□ -1.88
NPHP3-206ENST00000474871 A0A0J9YX75 114 aa3.3□□□□□ -1.88
NPHP3-206ENST00000474871 CLPSL2Q6UWE3 100 aa3.3□□□□□ -1.88
NPHP3-206ENST00000474871 Q8N814 137 aa3.3□□□□□ -1.88
NPHP3-206ENST00000474871 IGKV1-17P01599 117 aa3.3□□□□□ -1.88
NPHP3-206ENST00000474871 DEFB114Q30KQ6 69 aa3.3□□□□□ -1.88
NPHP3-206ENST00000474871 C9orf47Q6ZRZ4 202 aa3.3□□□□□ -1.88
NPHP3-206ENST00000474871 LINC01006Q8NI28 216 aa3.3□□□□□ -1.88
NPHP3-206ENST00000474871 LY6G6CO95867 125 aa3.3□□□□□ -1.88
NPHP3-206ENST00000474871 MRGPRG-AS1Q2M3A8 158 aa3.3□□□□□ -1.88
NPHP3-206ENST00000474871 SEC61BP60468 96 aaKnown RBP3.29□□□□□ -1.88
NPHP3-206ENST00000474871 ASB16-AS1Q495Z4 193 aa3.29□□□□□ -1.88
NPHP3-206ENST00000474871 Q8NDZ9 215 aa3.29□□□□□ -1.88
NPHP3-206ENST00000474871 C2CD3Q4AC94 2353 aa3.29□□□□□ -1.88
NPHP3-206ENST00000474871 Q8N9P0 234 aaPredicted RBP3.29□□□□□ -1.88
NPHP3-206ENST00000474871 TSHBP01222 138 aa3.29□□□□□ -1.88
NPHP3-206ENST00000474871 CRIP1P50238 77 aa3.29□□□□□ -1.88
NPHP3-206ENST00000474871 A6NED7 52 aa3.29□□□□□ -1.88
NPHP3-206ENST00000474871 CHKB-CPT1BH3BT56 60 aa3.29□□□□□ -1.88
NPHP3-206ENST00000474871 ODF3L2Q3SX64 289 aa3.29□□□□□ -1.88
NPHP3-206ENST00000474871 MUSTN1Q8IVN3 82 aa3.29□□□□□ -1.88
NPHP3-206ENST00000474871 CYP4F30PQ9H0H9 118 aa3.29□□□□□ -1.88
NPHP3-206ENST00000474871 KMT2BQ9UMN6 2715 aaPredicted RBP3.28□□□□□ -1.88
NPHP3-206ENST00000474871 USP9XQ93008 2570 aaPredicted RBP3.28□□□□□ -1.88
NPHP3-206ENST00000474871 PDE6GP18545 87 aa3.28□□□□□ -1.88
NPHP3-206ENST00000474871 MIAQ16674 131 aa3.28□□□□□ -1.88
NPHP3-206ENST00000474871 PKD1L2Q7Z442 2459 aa3.28□□□□□ -1.88
NPHP3-206ENST00000474871 IGLV10-54A0A075B6I4 117 aa3.28□□□□□ -1.88
NPHP3-206ENST00000474871 Q6ZR54 194 aa3.28□□□□□ -1.88
NPHP3-206ENST00000474871 COX7B2Q8TF08 81 aa3.28□□□□□ -1.88
NPHP3-206ENST00000474871 ORMDL1Q9P0S3 153 aa3.28□□□□□ -1.88
NPHP3-206ENST00000474871 ROMO1P60602 79 aa3.27□□□□□ -1.89
NPHP3-206ENST00000474871 HAMPP81172 84 aa3.27□□□□□ -1.89
NPHP3-206ENST00000474871 SVEP1Q4LDE5 3571 aa3.27□□□□□ -1.89
NPHP3-206ENST00000474871 IGLV9-49A0A0B4J1Y8 123 aa3.27□□□□□ -1.89
NPHP3-206ENST00000474871 KRTAP4-16G5E9R7 235 aaPredicted RBP3.27□□□□□ -1.89
NPHP3-206ENST00000474871 TLN2Q9Y4G6 2542 aa3.27□□□□□ -1.89
NPHP3-206ENST00000474871 CHCHD7Q9BUK0 85 aa3.27□□□□□ -1.89
NPHP3-206ENST00000474871 SPTBN4Q9H254 2564 aa3.27□□□□□ -1.89
NPHP3-206ENST00000474871 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.27□□□□□ -1.89
NPHP3-206ENST00000474871 A0A1W2PNM2 257 aa3.27□□□□□ -1.89
NPHP3-206ENST00000474871 IGKV2-29A2NJV5 120 aaPredicted RBP3.27□□□□□ -1.89
NPHP3-206ENST00000474871 TRBV6-1A0A0K0K1D8 114 aa3.26□□□□□ -1.89
NPHP3-206ENST00000474871 DEFB4AO15263 64 aa3.26□□□□□ -1.89
NPHP3-206ENST00000474871 ATP5EP2Q5VTU8 51 aa3.26□□□□□ -1.89
NPHP3-206ENST00000474871 OCR1Q9BZK8 76 aa3.26□□□□□ -1.89
NPHP3-206ENST00000474871 IGKV2-24A0A0C4DH68 120 aa3.26□□□□□ -1.89
NPHP3-206ENST00000474871 TRBV6-4A0A1B0GX49 114 aa3.26□□□□□ -1.89
NPHP3-206ENST00000474871 MSRB1Q9NZV6 116 aa3.26□□□□□ -1.89
NPHP3-206ENST00000474871 MUC7Q8TAX7 377 aa3.26□□□□□ -1.89
NPHP3-206ENST00000474871 DEFB104AQ8WTQ1 72 aa3.26□□□□□ -1.89
NPHP3-206ENST00000474871 Q8NAQ8 132 aa3.25□□□□□ -1.89
NPHP3-206ENST00000474871 IGKV1D-37A0A075B6S9 117 aa3.25□□□□□ -1.89
NPHP3-206ENST00000474871 C9orf116Q5BN46 136 aaPredicted RBP3.25□□□□□ -1.89
NPHP3-206ENST00000474871 DEFB105AQ8NG35 78 aa3.25□□□□□ -1.89
NPHP3-206ENST00000474871 TMEM254Q8TBM7 123 aa3.25□□□□□ -1.89
NPHP3-206ENST00000474871 JMJD7-PLA2G4BH0Y9G9 81 aa3.25□□□□□ -1.89
NPHP3-206ENST00000474871 CNFNQ9BYD5 112 aa3.25□□□□□ -1.89
NPHP3-206ENST00000474871 IGSF10Q6WRI0 2623 aa3.25□□□□□ -1.89
NPHP3-206ENST00000474871 F8P00451 2351 aa3.25□□□□□ -1.89
NPHP3-206ENST00000474871 USP9YO00507 2555 aaPredicted RBP3.25□□□□□ -1.89
NPHP3-206ENST00000474871 CFAP46Q8IYW2 2715 aa3.25□□□□□ -1.89
NPHP3-206ENST00000474871 LELP1Q5T871 98 aa3.25□□□□□ -1.89
NPHP3-206ENST00000474871 ENHOQ6UWT2 76 aa3.25□□□□□ -1.89
NPHP3-206ENST00000474871 CSMD2Q7Z408 3487 aa3.24□□□□□ -1.89
NPHP3-206ENST00000474871 CR1P17927 2039 aa3.24□□□□□ -1.89
NPHP3-206ENST00000474871 NREPQ16612 68 aa3.24□□□□□ -1.89
NPHP3-206ENST00000474871 KPRPQ5T749 579 aaPredicted RBP3.24□□□□□ -1.89
NPHP3-206ENST00000474871 HIGD2AQ9BW72 106 aa3.24□□□□□ -1.89
NPHP3-206ENST00000474871 CSMD1Q96PZ7 3565 aa3.24□□□□□ -1.89
NPHP3-206ENST00000474871 OTOGQ6ZRI0 2925 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms