RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 NAA38Q9BRA0 125 aaKnown RBP6.71□□□□□ -1.34
COL12A1-206ENST00000474564 LOC107984156A0A0G2JMH3 177 aa6.7□□□□□ -1.34
COL12A1-206ENST00000474564 CFC1BP0CG36 223 aa6.7□□□□□ -1.34
COL12A1-206ENST00000474564 CFC1P0CG37 223 aa6.7□□□□□ -1.34
COL12A1-206ENST00000474564 SCGB1C2P0DMR2 95 aa6.7□□□□□ -1.34
COL12A1-206ENST00000474564 RPL13AP40429 203 aaKnown RBP6.7□□□□□ -1.34
COL12A1-206ENST00000474564 ARL17AQ8IVW1 177 aa6.7□□□□□ -1.34
COL12A1-206ENST00000474564 OR13C6PQ8NH95 151 aa6.7□□□□□ -1.34
COL12A1-206ENST00000474564 PPDPFQ9H3Y8 114 aa6.7□□□□□ -1.34
COL12A1-206ENST00000474564 CSMD3Q7Z407 3707 aa6.69□□□□□ -1.34
COL12A1-206ENST00000474564 TRAV13-2A0A0B4J235 113 aa6.69□□□□□ -1.34
COL12A1-206ENST00000474564 XAGE1AQ9HD64 81 aa6.69□□□□□ -1.34
COL12A1-206ENST00000474564 CBY1Q9Y3M2 126 aa6.69□□□□□ -1.34
COL12A1-206ENST00000474564 DNAH7Q8WXX0 4024 aa6.68□□□□□ -1.34
COL12A1-206ENST00000474564 IGKV2-24A0A0C4DH68 120 aa6.68□□□□□ -1.34
COL12A1-206ENST00000474564 A0A1B0GWB2 263 aa6.68□□□□□ -1.34
COL12A1-206ENST00000474564 COX6CP09669 75 aa6.68□□□□□ -1.34
COL12A1-206ENST00000474564 SOSTDC1Q6X4U4 206 aa6.68□□□□□ -1.34
COL12A1-206ENST00000474564 SDIM1Q6ZPB5 146 aa6.68□□□□□ -1.34
COL12A1-206ENST00000474564 Q6ZRP5 223 aa6.68□□□□□ -1.34
COL12A1-206ENST00000474564 GTF2H5Q6ZYL4 71 aa6.68□□□□□ -1.34
COL12A1-206ENST00000474564 NKAPP1Q8N9T2 125 aa6.68□□□□□ -1.34
COL12A1-206ENST00000474564 DYNC2H1Q8NCM8 4307 aaKnown RBP6.67□□□□□ -1.34
COL12A1-206ENST00000474564 A0A1W2PPM0 123 aa6.67□□□□□ -1.34
COL12A1-206ENST00000474564 NDUFC2O95298 119 aa6.67□□□□□ -1.34
COL12A1-206ENST00000474564 TSPAN13O95857 204 aa6.67□□□□□ -1.34
COL12A1-206ENST00000474564 S100A7L2Q5SY68 101 aa6.67□□□□□ -1.34
COL12A1-206ENST00000474564 GAGE10A6NGK3 116 aa6.66□□□□□ -1.34
COL12A1-206ENST00000474564 NCR3O14931 201 aa6.66□□□□□ -1.34
COL12A1-206ENST00000474564 SPCS1Q9Y6A9 102 aa6.66□□□□□ -1.34
COL12A1-206ENST00000474564 A0A096LNI7 61 aa6.65□□□□□ -1.34
COL12A1-206ENST00000474564 PLA2G2DQ9UNK4 145 aa6.65□□□□□ -1.34
COL12A1-206ENST00000474564 STARD9Q9P2P6 4700 aa6.64□□□□□ -1.35
COL12A1-206ENST00000474564 KRTAP10-2P60368 255 aa6.64□□□□□ -1.35
COL12A1-206ENST00000474564 LINC01620Q4KN68 170 aa6.64□□□□□ -1.35
COL12A1-206ENST00000474564 TRBV10-2A0A0K0K1G8 114 aa6.63□□□□□ -1.35
COL12A1-206ENST00000474564 M0R378 163 aa6.63□□□□□ -1.35
COL12A1-206ENST00000474564 EIF4EBP3O60516 100 aaPredicted RBP6.63□□□□□ -1.35
COL12A1-206ENST00000474564 K7EP34 96 aa6.62□□□□□ -1.35
COL12A1-206ENST00000474564 FUSP35637 526 aaKnown RBP eCLIP6.62□□□□□ -1.35
COL12A1-206ENST00000474564 C9orf129Q5T035 196 aaKnown RBP6.62□□□□□ -1.35
COL12A1-206ENST00000474564 FAM19A5Q7Z5A7 132 aaPredicted RBP6.62□□□□□ -1.35
COL12A1-206ENST00000474564 TMEM126AQ9H061 195 aa6.62□□□□□ -1.35
COL12A1-206ENST00000474564 SPACA4Q8TDM5 124 aa6.61□□□□□ -1.35
COL12A1-206ENST00000474564 IGLV5-37A0A075B6J1 123 aa6.6□□□□□ -1.35
COL12A1-206ENST00000474564 TRBV20-1A0A075B6N2 111 aa6.6□□□□□ -1.35
COL12A1-206ENST00000474564 A0A1B0GVY2 172 aa6.6□□□□□ -1.35
COL12A1-206ENST00000474564 M0QXV9 152 aa6.6□□□□□ -1.35
COL12A1-206ENST00000474564 TRIAP1O43715 76 aa6.6□□□□□ -1.35
COL12A1-206ENST00000474564 CHTF8P0CG12 524 aa6.6□□□□□ -1.35
COL12A1-206ENST00000474564 UBE2BP63146 152 aa6.6□□□□□ -1.35
COL12A1-206ENST00000474564 MRPL55Q7Z7F7 128 aaKnown RBP6.6□□□□□ -1.35
COL12A1-206ENST00000474564 LINC00337Q8N6G1 96 aa6.6□□□□□ -1.35
COL12A1-206ENST00000474564 C22orf24Q9Y442 160 aa6.6□□□□□ -1.35
COL12A1-206ENST00000474564 ALMS1Q8TCU4 4167 aa6.6□□□□□ -1.35
COL12A1-206ENST00000474564 IGKV2-28A0A075B6P5 120 aa6.59□□□□□ -1.35
COL12A1-206ENST00000474564 A0A087WYN8 130 aa6.59□□□□□ -1.35
COL12A1-206ENST00000474564 SNCGO76070 127 aa6.59□□□□□ -1.35
COL12A1-206ENST00000474564 IGKV2D-28P01615 120 aa6.59□□□□□ -1.35
COL12A1-206ENST00000474564 VPREB1P12018 145 aa6.59□□□□□ -1.35
COL12A1-206ENST00000474564 UBE2V1Q13404 147 aa6.59□□□□□ -1.35
COL12A1-206ENST00000474564 ATXN8Q156A1 80 aa6.59□□□□□ -1.35
COL12A1-206ENST00000474564 C7orf33Q8WU49 177 aa6.59□□□□□ -1.35
COL12A1-206ENST00000474564 PLECQ15149 4684 aaKnown RBP6.58□□□□□ -1.36
COL12A1-206ENST00000474564 KRTAP10-1P60331 282 aa6.58□□□□□ -1.36
COL12A1-206ENST00000474564 PRR3P79522 188 aaKnown RBP6.58□□□□□ -1.36
COL12A1-206ENST00000474564 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.58□□□□□ -1.36
COL12A1-206ENST00000474564 FAM168BA1KXE4 195 aa6.57□□□□□ -1.36
COL12A1-206ENST00000474564 SERTAD4-AS1Q5TG53 156 aa6.57□□□□□ -1.36
COL12A1-206ENST00000474564 SMIM11BQ8TCY0 68 aa6.57□□□□□ -1.36
COL12A1-206ENST00000474564 PLAC8Q9NZF1 115 aa6.57□□□□□ -1.36
COL12A1-206ENST00000474564 A0A1W2PNN7 141 aa6.56□□□□□ -1.36
COL12A1-206ENST00000474564 DNAL4O96015 105 aa6.56□□□□□ -1.36
COL12A1-206ENST00000474564 RPL28P46779 137 aaKnown RBP6.56□□□□□ -1.36
COL12A1-206ENST00000474564 VPS13DQ5THJ4 4388 aa6.56□□□□□ -1.36
COL12A1-206ENST00000474564 TRAV23DV6A0A075B6W5 121 aa6.55□□□□□ -1.36
COL12A1-206ENST00000474564 H0YGX0 51 aa6.55□□□□□ -1.36
COL12A1-206ENST00000474564 H3BMG7 143 aa6.55□□□□□ -1.36
COL12A1-206ENST00000474564 TCL1BO95988 128 aa6.55□□□□□ -1.36
COL12A1-206ENST00000474564 CLEC2BQ92478 149 aa6.55□□□□□ -1.36
COL12A1-206ENST00000474564 DIRC1Q969H9 104 aa6.55□□□□□ -1.36
COL12A1-206ENST00000474564 LINC00167Q96N53 147 aa6.55□□□□□ -1.36
COL12A1-206ENST00000474564 TRBV10-3A0A0K0K1G6 114 aa6.54□□□□□ -1.36
COL12A1-206ENST00000474564 RPL37AP8A6NKH3 93 aa6.54□□□□□ -1.36
COL12A1-206ENST00000474564 PRYO14603 147 aa6.54□□□□□ -1.36
COL12A1-206ENST00000474564 IGLV6-57P01721 117 aa6.54□□□□□ -1.36
COL12A1-206ENST00000474564 Q6ZSA8 131 aa6.54□□□□□ -1.36
COL12A1-206ENST00000474564 IGLV1-50A0A075B6I6 118 aa6.53□□□□□ -1.36
COL12A1-206ENST00000474564 C9JAW5 83 aa6.53□□□□□ -1.36
COL12A1-206ENST00000474564 SLC25A20O43772 301 aa6.53□□□□□ -1.36
COL12A1-206ENST00000474564 PHF5AQ7RTV0 110 aaKnown RBP6.53□□□□□ -1.36
COL12A1-206ENST00000474564 CIRBP-AS1Q8TBR5 109 aa6.53□□□□□ -1.36
COL12A1-206ENST00000474564 ETDCA0A1B0GVM5 59 aa6.52□□□□□ -1.37
COL12A1-206ENST00000474564 PANO1I0J062 215 aa6.52□□□□□ -1.37
COL12A1-206ENST00000474564 C6orf99Q4VX62 202 aa6.52□□□□□ -1.37
COL12A1-206ENST00000474564 REG3GQ6UW15 175 aa6.52□□□□□ -1.37
COL12A1-206ENST00000474564 SCXQ7RTU7 201 aa6.52□□□□□ -1.37
COL12A1-206ENST00000474564 Q8NDZ9 215 aa6.52□□□□□ -1.37
COL12A1-206ENST00000474564 LYSTQ99698 3801 aa6.52□□□□□ -1.37
COL12A1-206ENST00000474564 KCNQ1DNQ9H478 68 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms