RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 LAMA1P25391 3075 aa0.61□□□□□ -2.31
SSB-210ENST00000474273 MYO18BQ8IUG5 2567 aa0.61□□□□□ -2.31
SSB-210ENST00000474273 XIRP2A4UGR9 3374 aa0.61□□□□□ -2.31
SSB-210ENST00000474273 DCHS1Q96JQ0 3298 aa0.61□□□□□ -2.31
SSB-210ENST00000474273 LRRK2Q5S007 2527 aa0.61□□□□□ -2.31
SSB-210ENST00000474273 POLQO75417 2590 aa0.6□□□□□ -2.31
SSB-210ENST00000474273 DMXL2Q8TDJ6 3036 aa0.6□□□□□ -2.31
SSB-210ENST00000474273 DMXL1Q9Y485 3027 aa0.6□□□□□ -2.31
SSB-210ENST00000474273 VPS13AQ96RL7 3174 aa0.6□□□□□ -2.31
SSB-210ENST00000474273 ANKRD17O75179 2603 aaKnown RBP0.6□□□□□ -2.31
SSB-210ENST00000474273 ANKHD1Q8IWZ3 2542 aaKnown RBP0.6□□□□□ -2.31
SSB-210ENST00000474273 A0A087WXM4 84 aa0.6□□□□□ -2.31
SSB-210ENST00000474273 TMEM14DPA8MWL7 114 aa0.6□□□□□ -2.31
SSB-210ENST00000474273 HCG22E2RYF7 251 aa0.6□□□□□ -2.31
SSB-210ENST00000474273 H3BUX3 64 aa0.6□□□□□ -2.31
SSB-210ENST00000474273 PDCD5O14737 125 aa0.6□□□□□ -2.31
SSB-210ENST00000474273 SNCGO76070 127 aa0.6□□□□□ -2.31
SSB-210ENST00000474273 APELAP0DMC3 54 aa0.6□□□□□ -2.31
SSB-210ENST00000474273 UBA52P62987 128 aaKnown RBP0.6□□□□□ -2.31
SSB-210ENST00000474273 HSD52Q0P140 79 aa0.6□□□□□ -2.31
SSB-210ENST00000474273 RPL39P5Q59GN2 51 aa0.6□□□□□ -2.31
SSB-210ENST00000474273 ARHGAP5-AS1Q96IT6 56 aa0.6□□□□□ -2.31
SSB-210ENST00000474273 Q9H521 79 aa0.6□□□□□ -2.31
SSB-210ENST00000474273 KAAG1Q9UBP8 84 aa0.6□□□□□ -2.31
SSB-210ENST00000474273 NAV2Q8IVL1 2488 aa0.6□□□□□ -2.31
SSB-210ENST00000474273 CCDC168Q8NDH2 2452 aa0.6□□□□□ -2.31
SSB-210ENST00000474273 FRYLO94915 3013 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 SPEGQ15772 3267 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 C2CD3Q4AC94 2353 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.59□□□□□ -2.31
SSB-210ENST00000474273 TRAV1-2A0A0B4J238 106 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 SMIM31A0A1B0GVY4 71 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 G3V318 75 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 M0R1W7 72 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 MPC2O95563 127 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 PRH1P02810 166 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 GNG2P59768 71 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 ELOF1P60002 83 aaKnown RBP0.59□□□□□ -2.31
SSB-210ENST00000474273 MRPS10P82664 201 aaKnown RBP0.59□□□□□ -2.31
SSB-210ENST00000474273 DEFA5Q01523 94 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 PLGLAQ15195 96 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 ZNF56Q15929 161 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 SPINK9Q5DT21 86 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 MINOS1Q5TGZ0 78 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 HEPN1Q6WQI6 88 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 Q6ZQY7 126 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 C5orf38Q86SI9 138 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 Q86TA4 180 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 NDUFA11Q86Y39 141 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 C20orf197Q8N268 126 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 S100A16Q96FQ6 103 aaKnown RBP0.59□□□□□ -2.31
SSB-210ENST00000474273 FAM103A1Q9BTL3 118 aaKnown RBP0.59□□□□□ -2.31
SSB-210ENST00000474273 DPH3P1Q9H4G8 78 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 ABRACLQ9P1F3 81 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 LINC00312Q9Y6C7 94 aa0.59□□□□□ -2.31
SSB-210ENST00000474273 USP9YO00507 2555 aaPredicted RBP0.59□□□□□ -2.32
SSB-210ENST00000474273 USP9XQ93008 2570 aaPredicted RBP0.59□□□□□ -2.32
SSB-210ENST00000474273 DNAH14Q0VDD8 3507 aa0.59□□□□□ -2.32
SSB-210ENST00000474273 USP34Q70CQ2 3546 aa0.59□□□□□ -2.32
SSB-210ENST00000474273 FRYQ5TBA9 3013 aa0.59□□□□□ -2.32
SSB-210ENST00000474273 TLN2Q9Y4G6 2542 aa0.59□□□□□ -2.32
SSB-210ENST00000474273 VCANP13611 3396 aa0.59□□□□□ -2.32
SSB-210ENST00000474273 IGSF10Q6WRI0 2623 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 TEP1Q99973 2627 aaKnown RBP0.58□□□□□ -2.32
SSB-210ENST00000474273 CEP295Q9C0D2 2601 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 ITPR3Q14573 2671 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 LOC400499M0QZD8 3231 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 JMJD1CQ15652 2540 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 TRAV30A0A087WSZ9 112 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 TRAV13-2A0A0B4J235 113 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 TRBV10-3A0A0K0K1G6 114 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 TEX49A0A1B0GTD5 131 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 RBAKDNA6NC62 111 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 NCR3O14931 201 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 SIX6O95475 246 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 LY6G6CO95867 125 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 IFNA17P01571 189 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 SPINK8P0C7L1 97 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 TRAPPC2P0DI81 140 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 TRAPPC2BP0DI82 140 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 SAA2P0DJI9 122 aaPredicted RBP0.58□□□□□ -2.32
SSB-210ENST00000474273 IFITM1P13164 125 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 HMGN3Q15651 99 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 DEFB136Q30KP8 78 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 TOMM5Q8N4H5 51 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 WFDC9Q8NEX5 89 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 COPS9Q8WXC6 57 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 Q96NJ1 140 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 SPANXDQ9BXN6 97 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 ANK3Q12955 4377 aaKnown RBP0.58□□□□□ -2.32
SSB-210ENST00000474273 UTP20O75691 2785 aaKnown RBP0.58□□□□□ -2.32
SSB-210ENST00000474273 TEX15Q9BXT5 2789 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 PDZD2O15018 2839 aa0.58□□□□□ -2.32
SSB-210ENST00000474273 DSPP15924 2871 aaKnown RBP0.58□□□□□ -2.32
SSB-210ENST00000474273 ABCA12Q86UK0 2595 aa0.57□□□□□ -2.32
SSB-210ENST00000474273 FLNBO75369 2602 aaKnown RBP0.57□□□□□ -2.32
SSB-210ENST00000474273 HECTD1Q9ULT8 2610 aa0.57□□□□□ -2.32
SSB-210ENST00000474273 CHD6Q8TD26 2715 aa0.57□□□□□ -2.32
SSB-210ENST00000474273 FREM2Q5SZK8 3169 aa0.57□□□□□ -2.32
SSB-210ENST00000474273 A0A1W2PPM0 123 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms