RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 SERF1AO75920 110 aa6.7□□□□□ -1.34
CKS1B-206ENST00000474215 VPREB1P12018 145 aa6.7□□□□□ -1.34
CKS1B-206ENST00000474215 RPL24P83731 157 aaKnown RBP6.7□□□□□ -1.34
CKS1B-206ENST00000474215 SCO1O75880 301 aa6.69□□□□□ -1.34
CKS1B-206ENST00000474215 LEPROTL1O95214 131 aa6.69□□□□□ -1.34
CKS1B-206ENST00000474215 RPL13AP40429 203 aaKnown RBP6.69□□□□□ -1.34
CKS1B-206ENST00000474215 LINC00158P58513 81 aa6.69□□□□□ -1.34
CKS1B-206ENST00000474215 LINC00310P59036 64 aa6.69□□□□□ -1.34
CKS1B-206ENST00000474215 IGKV2-28A0A075B6P5 120 aa6.68□□□□□ -1.34
CKS1B-206ENST00000474215 H0Y8G0 127 aa6.68□□□□□ -1.34
CKS1B-206ENST00000474215 IGKV2D-28P01615 120 aa6.68□□□□□ -1.34
CKS1B-206ENST00000474215 Q8NDZ9 215 aa6.67□□□□□ -1.34
CKS1B-206ENST00000474215 HSPB8Q9UJY1 196 aa6.67□□□□□ -1.34
CKS1B-206ENST00000474215 A0A0U1RRA0 63 aa6.66□□□□□ -1.34
CKS1B-206ENST00000474215 ATP6V1G1O75348 118 aa6.66□□□□□ -1.34
CKS1B-206ENST00000474215 FABP4P15090 132 aa6.66□□□□□ -1.34
CKS1B-206ENST00000474215 UBE2AP49459 152 aa6.66□□□□□ -1.34
CKS1B-206ENST00000474215 HERV-K104P63124 156 aa6.66□□□□□ -1.34
CKS1B-206ENST00000474215 KRTAP13-1Q8IUC0 172 aa6.66□□□□□ -1.34
CKS1B-206ENST00000474215 LINC00587B1AMM8 73 aa6.65□□□□□ -1.34
CKS1B-206ENST00000474215 SMIM13P0DJ93 91 aa6.65□□□□□ -1.34
CKS1B-206ENST00000474215 PLNP26678 52 aa6.65□□□□□ -1.34
CKS1B-206ENST00000474215 TMEM126AQ9H061 195 aa6.65□□□□□ -1.34
CKS1B-206ENST00000474215 NDUFA12Q9UI09 145 aa6.65□□□□□ -1.34
CKS1B-206ENST00000474215 MYMXA0A1B0GTQ4 84 aa6.64□□□□□ -1.35
CKS1B-206ENST00000474215 TMEM238C9JI98 176 aa6.64□□□□□ -1.35
CKS1B-206ENST00000474215 MEIG1Q5JSS6 88 aa6.64□□□□□ -1.35
CKS1B-206ENST00000474215 LRP2P98164 4655 aa6.64□□□□□ -1.35
CKS1B-206ENST00000474215 M0R378 163 aa6.63□□□□□ -1.35
CKS1B-206ENST00000474215 LEPROTO15243 131 aa6.63□□□□□ -1.35
CKS1B-206ENST00000474215 DPM2O94777 84 aa6.63□□□□□ -1.35
CKS1B-206ENST00000474215 CRYGAP11844 174 aa6.63□□□□□ -1.35
CKS1B-206ENST00000474215 FAM19A1Q7Z5A9 133 aa6.63□□□□□ -1.35
CKS1B-206ENST00000474215 MIR7-3HGQ8N6C7 128 aa6.63□□□□□ -1.35
CKS1B-206ENST00000474215 A0A087X002 238 aa6.62□□□□□ -1.35
CKS1B-206ENST00000474215 PRLHP81277 87 aa6.62□□□□□ -1.35
CKS1B-206ENST00000474215 BOD1L2Q8IYS8 172 aa6.62□□□□□ -1.35
CKS1B-206ENST00000474215 PLEKHB2Q96CS7 222 aa6.62□□□□□ -1.35
CKS1B-206ENST00000474215 PMCHL2Q9BQD1 86 aa6.62□□□□□ -1.35
CKS1B-206ENST00000474215 MAP1LC3CQ9BXW4 147 aa6.62□□□□□ -1.35
CKS1B-206ENST00000474215 J3QQQ9 107 aa6.61□□□□□ -1.35
CKS1B-206ENST00000474215 IGKCP01834 107 aa6.61□□□□□ -1.35
CKS1B-206ENST00000474215 TSPEAR-AS2P59090 65 aa6.61□□□□□ -1.35
CKS1B-206ENST00000474215 HERVK_113P61574 105 aa6.61□□□□□ -1.35
CKS1B-206ENST00000474215 ANAPC11Q9NYG5 84 aa6.61□□□□□ -1.35
CKS1B-206ENST00000474215 HIST1H2BKO60814 126 aa6.6□□□□□ -1.35
CKS1B-206ENST00000474215 HIST1H2BJP06899 126 aa6.6□□□□□ -1.35
CKS1B-206ENST00000474215 HIST1H2BOP23527 126 aa6.6□□□□□ -1.35
CKS1B-206ENST00000474215 HIST1H2BBP33778 126 aa6.6□□□□□ -1.35
CKS1B-206ENST00000474215 HIST1H2BDP58876 126 aa6.6□□□□□ -1.35
CKS1B-206ENST00000474215 HIST1H2BCP62807 126 aa6.6□□□□□ -1.35
CKS1B-206ENST00000474215 HIST2H2BEQ16778 126 aa6.6□□□□□ -1.35
CKS1B-206ENST00000474215 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.6□□□□□ -1.35
CKS1B-206ENST00000474215 TYMSOSQ8TAI1 123 aa6.6□□□□□ -1.35
CKS1B-206ENST00000474215 HIST1H2BHQ93079 126 aa6.6□□□□□ -1.35
CKS1B-206ENST00000474215 HIST1H2BNQ99877 126 aa6.6□□□□□ -1.35
CKS1B-206ENST00000474215 HIST1H2BMQ99879 126 aa6.6□□□□□ -1.35
CKS1B-206ENST00000474215 RNF213Q63HN8 5207 aa6.59□□□□□ -1.35
CKS1B-206ENST00000474215 IGKV2D-26A0A0A0MRZ7 120 aa6.59□□□□□ -1.35
CKS1B-206ENST00000474215 FAM229BQ4G0N7 80 aa6.59□□□□□ -1.35
CKS1B-206ENST00000474215 LOC107984156A0A0G2JMH3 177 aa6.58□□□□□ -1.36
CKS1B-206ENST00000474215 NCR3O14931 201 aa6.58□□□□□ -1.36
CKS1B-206ENST00000474215 LGALS3P17931 250 aaKnown RBP6.58□□□□□ -1.36
CKS1B-206ENST00000474215 NMUP48645 174 aa6.58□□□□□ -1.36
CKS1B-206ENST00000474215 ARL17AQ8IVW1 177 aa6.58□□□□□ -1.36
CKS1B-206ENST00000474215 SYS1-DBNDD2H3BUS1 97 aa6.57□□□□□ -1.36
CKS1B-206ENST00000474215 TSPAN13O95857 204 aa6.57□□□□□ -1.36
CKS1B-206ENST00000474215 KRTAP13-2Q52LG2 175 aa6.57□□□□□ -1.36
CKS1B-206ENST00000474215 DAND5Q8N907 189 aa6.57□□□□□ -1.36
CKS1B-206ENST00000474215 HIGD2AQ9BW72 106 aa6.57□□□□□ -1.36
CKS1B-206ENST00000474215 KCNQ1DNQ9H478 68 aa6.57□□□□□ -1.36
CKS1B-206ENST00000474215 PRYO14603 147 aa6.56□□□□□ -1.36
CKS1B-206ENST00000474215 TRBV10-3A0A0K0K1G6 114 aa6.55□□□□□ -1.36
CKS1B-206ENST00000474215 E9PLD3 99 aa6.55□□□□□ -1.36
CKS1B-206ENST00000474215 SPRR1AP35321 89 aa6.55□□□□□ -1.36
CKS1B-206ENST00000474215 PRR4Q16378 134 aa6.55□□□□□ -1.36
CKS1B-206ENST00000474215 LINC00337Q8N6G1 96 aa6.55□□□□□ -1.36
CKS1B-206ENST00000474215 TRBV10-2A0A0K0K1G8 114 aa6.54□□□□□ -1.36
CKS1B-206ENST00000474215 S100A12P80511 92 aa6.54□□□□□ -1.36
CKS1B-206ENST00000474215 MIEN1Q9BRT3 115 aa6.54□□□□□ -1.36
CKS1B-206ENST00000474215 A0A0J9YXY3 114 aa6.53□□□□□ -1.36
CKS1B-206ENST00000474215 ETDCA0A1B0GVM5 59 aa6.53□□□□□ -1.36
CKS1B-206ENST00000474215 KRTAP4-16G5E9R7 235 aaPredicted RBP6.53□□□□□ -1.36
CKS1B-206ENST00000474215 ADAMTSL4-AS1Q5T5F5 129 aa6.53□□□□□ -1.36
CKS1B-206ENST00000474215 LINC01545Q5VT33 79 aa6.53□□□□□ -1.36
CKS1B-206ENST00000474215 PET117Q6UWS5 81 aa6.53□□□□□ -1.36
CKS1B-206ENST00000474215 NDUFC2O95298 119 aa6.52□□□□□ -1.37
CKS1B-206ENST00000474215 DDTP30046 118 aa6.52□□□□□ -1.37
CKS1B-206ENST00000474215 COA6Q5JTJ3 125 aaKnown RBP6.52□□□□□ -1.37
CKS1B-206ENST00000474215 LINC00304Q8N9R0 145 aa6.52□□□□□ -1.37
CKS1B-206ENST00000474215 SPRR4Q96PI1 79 aa6.52□□□□□ -1.37
CKS1B-206ENST00000474215 SPANXB1Q9NS25 103 aaPredicted RBP6.52□□□□□ -1.37
CKS1B-206ENST00000474215 ZNF706Q9Y5V0 76 aaPredicted RBP6.52□□□□□ -1.37
CKS1B-206ENST00000474215 SMCR5Q8TEV8 140 aa6.51□□□□□ -1.37
CKS1B-206ENST00000474215 B5MCH6 92 aa6.5□□□□□ -1.37
CKS1B-206ENST00000474215 EIF4EBP3O60516 100 aaPredicted RBP6.5□□□□□ -1.37
CKS1B-206ENST00000474215 C3orf79P0CE67 100 aa6.5□□□□□ -1.37
CKS1B-206ENST00000474215 S100A7L2Q5SY68 101 aa6.5□□□□□ -1.37
CKS1B-206ENST00000474215 SOSTDC1Q6X4U4 206 aa6.5□□□□□ -1.37
CKS1B-206ENST00000474215 IGLV6-57P01721 117 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms