RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 IFI27L1Q96BM0 104 aa7.94□□□□□ -1.14
SHROOM3-204ENST00000473602 XAGE1AQ9HD64 81 aa7.94□□□□□ -1.14
SHROOM3-204ENST00000473602 CHTOPQ9Y3Y2 248 aaKnown RBP7.94□□□□□ -1.14
SHROOM3-204ENST00000473602 C11orf86A6NJI1 115 aa7.93□□□□□ -1.14
SHROOM3-204ENST00000473602 IGLV7-43P04211 117 aa7.93□□□□□ -1.14
SHROOM3-204ENST00000473602 TMEM170BQ5T4T1 132 aa7.93□□□□□ -1.14
SHROOM3-204ENST00000473602 TP73-AS1Q9UF72 201 aa7.93□□□□□ -1.14
SHROOM3-204ENST00000473602 KRTAP11-1Q8IUC1 163 aa7.92□□□□□ -1.14
SHROOM3-204ENST00000473602 C22orf24Q9Y442 160 aa7.92□□□□□ -1.14
SHROOM3-204ENST00000473602 COX17Q14061 63 aa7.91□□□□□ -1.14
SHROOM3-204ENST00000473602 JOSD1Q15040 202 aaPredicted RBP7.91□□□□□ -1.14
SHROOM3-204ENST00000473602 DIRC1Q969H9 104 aa7.91□□□□□ -1.14
SHROOM3-204ENST00000473602 LPAP08519 4548 aa7.91□□□□□ -1.14
SHROOM3-204ENST00000473602 KRTAP10-8P60410 259 aa7.9□□□□□ -1.14
SHROOM3-204ENST00000473602 MRPL55Q7Z7F7 128 aaKnown RBP7.9□□□□□ -1.14
SHROOM3-204ENST00000473602 FAM19A2Q8N3H0 131 aa7.9□□□□□ -1.14
SHROOM3-204ENST00000473602 NUPR1O60356 82 aa7.89□□□□□ -1.15
SHROOM3-204ENST00000473602 FABP4P15090 132 aa7.89□□□□□ -1.15
SHROOM3-204ENST00000473602 ERG28Q9UKR5 140 aa7.89□□□□□ -1.15
SHROOM3-204ENST00000473602 IGLV5-37A0A075B6J1 123 aa7.88□□□□□ -1.15
SHROOM3-204ENST00000473602 TMEM223A0PJW6 202 aa7.88□□□□□ -1.15
SHROOM3-204ENST00000473602 H0Y9J4 135 aa7.88□□□□□ -1.15
SHROOM3-204ENST00000473602 SERF1AO75920 110 aa7.88□□□□□ -1.15
SHROOM3-204ENST00000473602 LEPROTL1O95214 131 aa7.88□□□□□ -1.15
SHROOM3-204ENST00000473602 LINC00310P59036 64 aa7.88□□□□□ -1.15
SHROOM3-204ENST00000473602 HIST1H2BLQ99880 126 aa7.88□□□□□ -1.15
SHROOM3-204ENST00000473602 PFN2P35080 140 aa7.87□□□□□ -1.15
SHROOM3-204ENST00000473602 PYY3Q5JQD4 70 aa7.87□□□□□ -1.15
SHROOM3-204ENST00000473602 ZNF625Q96I27 306 aaPredicted RBP7.87□□□□□ -1.15
SHROOM3-204ENST00000473602 NKAPP1Q8N9T2 125 aa7.86□□□□□ -1.15
SHROOM3-204ENST00000473602 HSPB8Q9UJY1 196 aa7.86□□□□□ -1.15
SHROOM3-204ENST00000473602 MUC2Q02817 5179 aa7.84□□□□□ -1.15
SHROOM3-204ENST00000473602 ZNF861PO60384 105 aa7.84□□□□□ -1.15
SHROOM3-204ENST00000473602 LINC00167Q96N53 147 aa7.84□□□□□ -1.15
SHROOM3-204ENST00000473602 SND1-IT1Q9HBX3 110 aa7.84□□□□□ -1.15
SHROOM3-204ENST00000473602 PLNP26678 52 aa7.83□□□□□ -1.16
SHROOM3-204ENST00000473602 RPL24P83731 157 aaKnown RBP7.83□□□□□ -1.16
SHROOM3-204ENST00000473602 H0Y8G0 127 aa7.82□□□□□ -1.16
SHROOM3-204ENST00000473602 BCE1O60756 84 aa7.82□□□□□ -1.16
SHROOM3-204ENST00000473602 DDTP30046 118 aa7.82□□□□□ -1.16
SHROOM3-204ENST00000473602 HERV-K104P63124 156 aa7.82□□□□□ -1.16
SHROOM3-204ENST00000473602 IGLV1-50A0A075B6I6 118 aa7.81□□□□□ -1.16
SHROOM3-204ENST00000473602 RPL37AP8A6NKH3 93 aa7.81□□□□□ -1.16
SHROOM3-204ENST00000473602 LINC00587B1AMM8 73 aa7.81□□□□□ -1.16
SHROOM3-204ENST00000473602 VPREB1P12018 145 aa7.81□□□□□ -1.16
SHROOM3-204ENST00000473602 RPL28P46779 137 aaKnown RBP7.81□□□□□ -1.16
SHROOM3-204ENST00000473602 GAGE10A6NGK3 116 aa7.8□□□□□ -1.16
SHROOM3-204ENST00000473602 KRTAP1-4P0C5Y4 121 aa7.8□□□□□ -1.16
SHROOM3-204ENST00000473602 LINC00158P58513 81 aa7.8□□□□□ -1.16
SHROOM3-204ENST00000473602 MYMXA0A1B0GTQ4 84 aa7.79□□□□□ -1.16
SHROOM3-204ENST00000473602 C20orf202A1L168 122 aa7.79□□□□□ -1.16
SHROOM3-204ENST00000473602 DPM2O94777 84 aa7.79□□□□□ -1.16
SHROOM3-204ENST00000473602 SCGB1D1O95968 90 aa7.79□□□□□ -1.16
SHROOM3-204ENST00000473602 MEIG1Q5JSS6 88 aa7.79□□□□□ -1.16
SHROOM3-204ENST00000473602 PLEKHB2Q96CS7 222 aa7.79□□□□□ -1.16
SHROOM3-204ENST00000473602 MAP1LC3CQ9BXW4 147 aa7.79□□□□□ -1.16
SHROOM3-204ENST00000473602 NDUFA12Q9UI09 145 aa7.79□□□□□ -1.16
SHROOM3-204ENST00000473602 LEPROTO15243 131 aa7.78□□□□□ -1.16
SHROOM3-204ENST00000473602 HERVK_113P61574 105 aa7.78□□□□□ -1.16
SHROOM3-204ENST00000473602 IGKV2-28A0A075B6P5 120 aa7.77□□□□□ -1.17
SHROOM3-204ENST00000473602 IGKV2D-28P01615 120 aa7.77□□□□□ -1.17
SHROOM3-204ENST00000473602 IGKCP01834 107 aa7.77□□□□□ -1.17
SHROOM3-204ENST00000473602 RPL13AP40429 203 aaKnown RBP7.77□□□□□ -1.17
SHROOM3-204ENST00000473602 PRR26Q8N8Z3 221 aa7.77□□□□□ -1.17
SHROOM3-204ENST00000473602 SMIM13P0DJ93 91 aa7.76□□□□□ -1.17
SHROOM3-204ENST00000473602 KRTAP9-2Q9BYQ4 174 aa7.76□□□□□ -1.17
SHROOM3-204ENST00000473602 A0A0U1RRA0 63 aa7.75□□□□□ -1.17
SHROOM3-204ENST00000473602 A6NJY4 79 aa7.75□□□□□ -1.17
SHROOM3-204ENST00000473602 J3QQQ9 107 aa7.75□□□□□ -1.17
SHROOM3-204ENST00000473602 NMUP48645 174 aa7.75□□□□□ -1.17
SHROOM3-204ENST00000473602 UBE2AP49459 152 aa7.75□□□□□ -1.17
SHROOM3-204ENST00000473602 KRTAP13-1Q8IUC0 172 aa7.75□□□□□ -1.17
SHROOM3-204ENST00000473602 MIR7-3HGQ8N6C7 128 aa7.75□□□□□ -1.17
SHROOM3-204ENST00000473602 M0R143 59 aa7.74□□□□□ -1.17
SHROOM3-204ENST00000473602 TSPEAR-AS2P59090 65 aa7.74□□□□□ -1.17
SHROOM3-204ENST00000473602 Q8NDZ9 215 aa7.74□□□□□ -1.17
SHROOM3-204ENST00000473602 PMCHL2Q9BQD1 86 aa7.74□□□□□ -1.17
SHROOM3-204ENST00000473602 VAMP8Q9BV40 100 aa7.74□□□□□ -1.17
SHROOM3-204ENST00000473602 TMEM126AQ9H061 195 aa7.74□□□□□ -1.17
SHROOM3-204ENST00000473602 IGKV2D-26A0A0A0MRZ7 120 aa7.73□□□□□ -1.17
SHROOM3-204ENST00000473602 SYS1-DBNDD2H3BUS1 97 aa7.73□□□□□ -1.17
SHROOM3-204ENST00000473602 M0R378 163 aa7.73□□□□□ -1.17
SHROOM3-204ENST00000473602 LGALS3P17931 250 aaKnown RBP7.73□□□□□ -1.17
SHROOM3-204ENST00000473602 BOD1L2Q8IYS8 172 aa7.73□□□□□ -1.17
SHROOM3-204ENST00000473602 C14orf144Q96I85 54 aa7.73□□□□□ -1.17
SHROOM3-204ENST00000473602 MIEN1Q9BRT3 115 aa7.72□□□□□ -1.17
SHROOM3-204ENST00000473602 LOC107984156A0A0G2JMH3 177 aa7.71□□□□□ -1.18
SHROOM3-204ENST00000473602 TMEM238C9JI98 176 aa7.71□□□□□ -1.18
SHROOM3-204ENST00000473602 E9PLD3 99 aa7.71□□□□□ -1.18
SHROOM3-204ENST00000473602 FAM19A1Q7Z5A9 133 aa7.71□□□□□ -1.18
SHROOM3-204ENST00000473602 ARL17AQ8IVW1 177 aa7.71□□□□□ -1.18
SHROOM3-204ENST00000473602 PRLHP81277 87 aa7.7□□□□□ -1.18
SHROOM3-204ENST00000473602 LINC01545Q5VT33 79 aa7.7□□□□□ -1.18
SHROOM3-204ENST00000473602 PET117Q6UWS5 81 aa7.7□□□□□ -1.18
SHROOM3-204ENST00000473602 PRYO14603 147 aa7.69□□□□□ -1.18
SHROOM3-204ENST00000473602 CRYGAP11844 174 aa7.69□□□□□ -1.18
SHROOM3-204ENST00000473602 UQCR10Q9UDW1 63 aa7.69□□□□□ -1.18
SHROOM3-204ENST00000473602 NCR3O14931 201 aa7.68□□□□□ -1.18
SHROOM3-204ENST00000473602 TRBV10-2A0A0K0K1G8 114 aa7.67□□□□□ -1.18
SHROOM3-204ENST00000473602 HSBP1L1C9JCN9 74 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms