RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 SMIM11BQ8TCY0 68 aa4.1□□□□□ -1.75
CLK1-210ENST00000473565 FAM218AQ96MZ4 157 aa4.1□□□□□ -1.75
CLK1-210ENST00000473565 GAGE2DQ9UEU5 116 aa4.1□□□□□ -1.75
CLK1-210ENST00000473565 TRAV13-2A0A0B4J235 113 aa4.1□□□□□ -1.75
CLK1-210ENST00000473565 COX17Q14061 63 aa4.1□□□□□ -1.75
CLK1-210ENST00000473565 OCIAD2Q56VL3 154 aa4.1□□□□□ -1.75
CLK1-210ENST00000473565 TRBV20-1A0A075B6N2 111 aa4.09□□□□□ -1.75
CLK1-210ENST00000473565 F8W1H4 67 aa4.09□□□□□ -1.75
CLK1-210ENST00000473565 LINC01620Q4KN68 170 aa4.09□□□□□ -1.75
CLK1-210ENST00000473565 GVQW2A0A096LPI5 108 aaPredicted RBP4.09□□□□□ -1.76
CLK1-210ENST00000473565 COX6CP09669 75 aa4.09□□□□□ -1.76
CLK1-210ENST00000473565 ATXN8Q156A1 80 aa4.09□□□□□ -1.76
CLK1-210ENST00000473565 RNF151Q2KHN1 245 aa4.09□□□□□ -1.76
CLK1-210ENST00000473565 RPL18AQ02543 176 aaKnown RBP4.08□□□□□ -1.76
CLK1-210ENST00000473565 SYCNQ0VAF6 134 aa4.08□□□□□ -1.76
CLK1-210ENST00000473565 DNAH2Q9P225 4427 aa4.08□□□□□ -1.76
CLK1-210ENST00000473565 LST1O00453 97 aa4.08□□□□□ -1.76
CLK1-210ENST00000473565 SLC25A20O43772 301 aa4.08□□□□□ -1.76
CLK1-210ENST00000473565 Q6ZRP5 223 aa4.08□□□□□ -1.76
CLK1-210ENST00000473565 PPDPFQ9H3Y8 114 aa4.08□□□□□ -1.76
CLK1-210ENST00000473565 M0R2N4 97 aa4.08□□□□□ -1.76
CLK1-210ENST00000473565 NUPR2A6NF83 97 aa4.07□□□□□ -1.76
CLK1-210ENST00000473565 RPL28P46779 137 aaKnown RBP4.07□□□□□ -1.76
CLK1-210ENST00000473565 C2orf48Q96LS8 159 aa4.07□□□□□ -1.76
CLK1-210ENST00000473565 A0A087WYN8 130 aa4.07□□□□□ -1.76
CLK1-210ENST00000473565 ANKRD29Q8N6D5 301 aa4.07□□□□□ -1.76
CLK1-210ENST00000473565 CARD19Q96LW7 228 aa4.07□□□□□ -1.76
CLK1-210ENST00000473565 S100A7L2Q5SY68 101 aa4.06□□□□□ -1.76
CLK1-210ENST00000473565 NDUFC2-KCTD14E9PQ53 114 aa4.06□□□□□ -1.76
CLK1-210ENST00000473565 NDUFC2O95298 119 aa4.06□□□□□ -1.76
CLK1-210ENST00000473565 RMI2Q96E14 147 aa4.06□□□□□ -1.76
CLK1-210ENST00000473565 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.06□□□□□ -1.76
CLK1-210ENST00000473565 PSCAO43653 123 aa4.06□□□□□ -1.76
CLK1-210ENST00000473565 C9orf129Q5T035 196 aaKnown RBP4.06□□□□□ -1.76
CLK1-210ENST00000473565 TRBV10-3A0A0K0K1G6 114 aa4.05□□□□□ -1.76
CLK1-210ENST00000473565 TRBV10-2A0A0K0K1G8 114 aa4.05□□□□□ -1.76
CLK1-210ENST00000473565 FAM168BA1KXE4 195 aa4.05□□□□□ -1.76
CLK1-210ENST00000473565 C6orf99Q4VX62 202 aa4.05□□□□□ -1.76
CLK1-210ENST00000473565 HECTD4Q9Y4D8 3996 aa4.05□□□□□ -1.76
CLK1-210ENST00000473565 NBDYA0A0U1RRE5 68 aa4.04□□□□□ -1.76
CLK1-210ENST00000473565 K7ERU9 68 aa4.04□□□□□ -1.76
CLK1-210ENST00000473565 VPREB1P12018 145 aa4.04□□□□□ -1.76
CLK1-210ENST00000473565 GAGE2BQ13066 116 aa4.04□□□□□ -1.76
CLK1-210ENST00000473565 SERTAD4-AS1Q5TG53 156 aa4.04□□□□□ -1.76
CLK1-210ENST00000473565 TMEM126AQ9H061 195 aa4.04□□□□□ -1.76
CLK1-210ENST00000473565 TEX49A0A1B0GTD5 131 aa4.04□□□□□ -1.76
CLK1-210ENST00000473565 TEN1Q86WV5 123 aa4.04□□□□□ -1.76
CLK1-210ENST00000473565 A0A1B0GV72 72 aa4.04□□□□□ -1.76
CLK1-210ENST00000473565 FUSP35637 526 aaKnown RBP eCLIP4.04□□□□□ -1.76
CLK1-210ENST00000473565 IGLV6-57P01721 117 aa4.03□□□□□ -1.76
CLK1-210ENST00000473565 KRTAP21-3Q3LHN1 58 aa4.03□□□□□ -1.76
CLK1-210ENST00000473565 VPS25Q9BRG1 176 aa4.03□□□□□ -1.76
CLK1-210ENST00000473565 MUC7Q8TAX7 377 aa4.02□□□□□ -1.77
CLK1-210ENST00000473565 HYDINQ4G0P3 5121 aa4.02□□□□□ -1.77
CLK1-210ENST00000473565 IGKV2-24A0A0C4DH68 120 aa4.02□□□□□ -1.77
CLK1-210ENST00000473565 BAALC-AS2P0C853 105 aa4.02□□□□□ -1.77
CLK1-210ENST00000473565 C22orf24Q9Y442 160 aa4.02□□□□□ -1.77
CLK1-210ENST00000473565 TRACP01848 142 aa4.02□□□□□ -1.77
CLK1-210ENST00000473565 FAM19A5Q7Z5A7 132 aaPredicted RBP4.02□□□□□ -1.77
CLK1-210ENST00000473565 KRTAP7-1Q8IUC3 87 aa4.02□□□□□ -1.77
CLK1-210ENST00000473565 PPDPFLQ8WWR9 84 aa4.02□□□□□ -1.77
CLK1-210ENST00000473565 TRAV23DV6A0A075B6W5 121 aa4.01□□□□□ -1.77
CLK1-210ENST00000473565 RPL37AP8A6NKH3 93 aa4.01□□□□□ -1.77
CLK1-210ENST00000473565 H0YGX0 51 aa4.01□□□□□ -1.77
CLK1-210ENST00000473565 H3BT86 120 aa4.01□□□□□ -1.77
CLK1-210ENST00000473565 DNAL4O96015 105 aa4.01□□□□□ -1.77
CLK1-210ENST00000473565 SRRM2Q9UQ35 2752 aaKnown RBP4.01□□□□□ -1.77
CLK1-210ENST00000473565 Q6ZRN7 208 aaPredicted RBP4.01□□□□□ -1.77
CLK1-210ENST00000473565 DNAH17Q9UFH2 4485 aa4.01□□□□□ -1.77
CLK1-210ENST00000473565 A0A096LNI7 61 aa4□□□□□ -1.77
CLK1-210ENST00000473565 CHTF8P0CG12 524 aa4□□□□□ -1.77
CLK1-210ENST00000473565 C7orf33Q8WU49 177 aa4□□□□□ -1.77
CLK1-210ENST00000473565 LRCOL1A6NCL2 159 aa4□□□□□ -1.77
CLK1-210ENST00000473565 F8WDY8 70 aa4□□□□□ -1.77
CLK1-210ENST00000473565 M0R378 163 aa4□□□□□ -1.77
CLK1-210ENST00000473565 TLX1NBP0CAT3 122 aa4□□□□□ -1.77
CLK1-210ENST00000473565 TTC32Q5I0X7 151 aa4□□□□□ -1.77
CLK1-210ENST00000473565 NKAPP1Q8N9T2 125 aa4□□□□□ -1.77
CLK1-210ENST00000473565 ZNF73O43830 326 aaPredicted RBP4□□□□□ -1.77
CLK1-210ENST00000473565 LY6G6CO95867 125 aa4□□□□□ -1.77
CLK1-210ENST00000473565 Q8N814 137 aa4□□□□□ -1.77
CLK1-210ENST00000473565 LOC107984640A0A0U1RRK4 108 aa3.99□□□□□ -1.77
CLK1-210ENST00000473565 M0QXV9 152 aa3.99□□□□□ -1.77
CLK1-210ENST00000473565 DIRC1Q969H9 104 aa3.99□□□□□ -1.77
CLK1-210ENST00000473565 J3QR89 54 aa3.99□□□□□ -1.77
CLK1-210ENST00000473565 LINC00575Q6W349 94 aa3.99□□□□□ -1.77
CLK1-210ENST00000473565 FRAS1Q86XX4 4008 aa3.98□□□□□ -1.77
CLK1-210ENST00000473565 CNBPP62633 177 aaKnown RBP3.98□□□□□ -1.77
CLK1-210ENST00000473565 LINC01600Q96MT4 127 aa3.98□□□□□ -1.77
CLK1-210ENST00000473565 ALMS1Q8TCU4 4167 aa3.98□□□□□ -1.77
CLK1-210ENST00000473565 A0A1W2PNN7 141 aa3.98□□□□□ -1.77
CLK1-210ENST00000473565 LINC00167Q96N53 147 aa3.98□□□□□ -1.77
CLK1-210ENST00000473565 DNAH6Q9C0G6 4158 aa3.97□□□□□ -1.77
CLK1-210ENST00000473565 PANO1I0J062 215 aa3.97□□□□□ -1.77
CLK1-210ENST00000473565 COX7BP24311 80 aa3.97□□□□□ -1.77
CLK1-210ENST00000473565 Q6ZQY7 126 aa3.97□□□□□ -1.77
CLK1-210ENST00000473565 ORMDL1Q9P0S3 153 aa3.97□□□□□ -1.77
CLK1-210ENST00000473565 hADV29S1A0JD25 119 aa3.97□□□□□ -1.77
CLK1-210ENST00000473565 Q6ZR54 194 aa3.97□□□□□ -1.77
CLK1-210ENST00000473565 CDIP1Q9H305 208 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms