RNA–Protein interactions for RNA: ENST00000472564.1

LAMP1-203, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 2

Gene LAMP1, Length 5,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-203ENST00000472564 C1orf195Q5TG92 126 aa11.88□□□□□ -0.51
LAMP1-203ENST00000472564 LITAFQ99732 161 aa11.88□□□□□ -0.51
LAMP1-203ENST00000472564 FLNBO75369 2602 aaKnown RBP11.87□□□□□ -0.51
LAMP1-203ENST00000472564 USP24Q9UPU5 2620 aa11.87□□□□□ -0.51
LAMP1-203ENST00000472564 LY6G6CO95867 125 aa11.86□□□□□ -0.51
LAMP1-203ENST00000472564 CRYGAP11844 174 aa11.86□□□□□ -0.51
LAMP1-203ENST00000472564 C6orf48Q9UBA6 75 aa11.86□□□□□ -0.51
LAMP1-203ENST00000472564 PRLHP81277 87 aa11.85□□□□□ -0.51
LAMP1-203ENST00000472564 C22orf24Q9Y442 160 aa11.85□□□□□ -0.51
LAMP1-203ENST00000472564 CHD7Q9P2D1 2997 aa11.85□□□□□ -0.51
LAMP1-203ENST00000472564 X6R8D5 127 aa11.84□□□□□ -0.51
LAMP1-203ENST00000472564 KIAA0087Q14695 138 aa11.84□□□□□ -0.51
LAMP1-203ENST00000472564 IGHV6-1A0A0B4J1U7 121 aa11.83□□□□□ -0.51
LAMP1-203ENST00000472564 HCG22E2RYF7 251 aa11.82□□□□□ -0.52
LAMP1-203ENST00000472564 NUPR2A6NF83 97 aa11.82□□□□□ -0.52
LAMP1-203ENST00000472564 LINC01556Q5JQF7 62 aa11.82□□□□□ -0.52
LAMP1-203ENST00000472564 CIRBP-AS1Q8TBR5 109 aa11.81□□□□□ -0.52
LAMP1-203ENST00000472564 TRBV7-6A0A0J9YX20 115 aa11.8□□□□□ -0.52
LAMP1-203ENST00000472564 K7ERS5 55 aa11.8□□□□□ -0.52
LAMP1-203ENST00000472564 PCOTHQ58A44 107 aa11.8□□□□□ -0.52
LAMP1-203ENST00000472564 H0Y9P7 68 aa11.8□□□□□ -0.52
LAMP1-203ENST00000472564 PSPHP1O15172 72 aa11.79□□□□□ -0.52
LAMP1-203ENST00000472564 SMCR5Q8TEV8 140 aa11.79□□□□□ -0.52
LAMP1-203ENST00000472564 BPTFQ12830 3046 aa11.77□□□□□ -0.52
LAMP1-203ENST00000472564 Q6ZQT0 140 aa11.77□□□□□ -0.53
LAMP1-203ENST00000472564 LINC00167Q96N53 147 aa11.77□□□□□ -0.53
LAMP1-203ENST00000472564 PMAIP1Q13794 54 aa11.76□□□□□ -0.53
LAMP1-203ENST00000472564 C5orf42Q9H799 3197 aa11.76□□□□□ -0.53
LAMP1-203ENST00000472564 BCE1O60756 84 aa11.76□□□□□ -0.53
LAMP1-203ENST00000472564 ELOF1P60002 83 aaKnown RBP11.76□□□□□ -0.53
LAMP1-203ENST00000472564 FSHBP01225 129 aa11.76□□□□□ -0.53
LAMP1-203ENST00000472564 SMIM29Q86T20 159 aa11.76□□□□□ -0.53
LAMP1-203ENST00000472564 EIF4EBP3O60516 100 aaPredicted RBP11.74□□□□□ -0.53
LAMP1-203ENST00000472564 hDV103S1A0JD37 113 aa11.73□□□□□ -0.53
LAMP1-203ENST00000472564 IGLV5-52A0A0A0MRZ9 124 aa11.73□□□□□ -0.53
LAMP1-203ENST00000472564 LOC110117498A0A087WWA1 95 aa11.72□□□□□ -0.53
LAMP1-203ENST00000472564 MGAM2Q2M2H8 2515 aa11.72□□□□□ -0.53
LAMP1-203ENST00000472564 H3BNG1 76 aa11.71□□□□□ -0.53
LAMP1-203ENST00000472564 HECTD1Q9ULT8 2610 aa11.7□□□□□ -0.54
LAMP1-203ENST00000472564 RPS28P62857 69 aaKnown RBP11.7□□□□□ -0.54
LAMP1-203ENST00000472564 A0A0C4DFX4 3053 aa11.7□□□□□ -0.54
LAMP1-203ENST00000472564 C1orf64Q8NEQ6 169 aa11.69□□□□□ -0.54
LAMP1-203ENST00000472564 Q8NAQ8 132 aa11.68□□□□□ -0.54
LAMP1-203ENST00000472564 A0A1B0GW54 56 aa11.68□□□□□ -0.54
LAMP1-203ENST00000472564 Q8NBF4 154 aa11.67□□□□□ -0.54
LAMP1-203ENST00000472564 RANBP2P49792 3224 aaKnown RBP11.66□□□□□ -0.54
LAMP1-203ENST00000472564 Q6ZRX8 168 aa11.66□□□□□ -0.54
LAMP1-203ENST00000472564 RETNLBQ9BQ08 111 aa11.64□□□□□ -0.55
LAMP1-203ENST00000472564 TM2D3Q9BRN9 247 aa11.63□□□□□ -0.55
LAMP1-203ENST00000472564 CENPEQ02224 2701 aa11.63□□□□□ -0.55
LAMP1-203ENST00000472564 GVQW2A0A096LPI5 108 aaPredicted RBP11.63□□□□□ -0.55
LAMP1-203ENST00000472564 IGLV6-57P01721 117 aa11.62□□□□□ -0.55
LAMP1-203ENST00000472564 C1orf134Q5TEV5 83 aa11.61□□□□□ -0.55
LAMP1-203ENST00000472564 PRO0628Q9UI54 55 aa11.61□□□□□ -0.55
LAMP1-203ENST00000472564 CSNK1G2-AS1Q8NCQ2 148 aa11.61□□□□□ -0.55
LAMP1-203ENST00000472564 C4orf26Q17RF5 130 aa11.61□□□□□ -0.55
LAMP1-203ENST00000472564 LINC00476Q8WZB0 136 aa11.61□□□□□ -0.55
LAMP1-203ENST00000472564 VPREB1P12018 145 aa11.6□□□□□ -0.55
LAMP1-203ENST00000472564 ST20-AS1Q8NBB2 130 aa11.59□□□□□ -0.55
LAMP1-203ENST00000472564 CHD9Q3L8U1 2897 aa11.59□□□□□ -0.55
LAMP1-203ENST00000472564 ATRQ13535 2644 aa11.59□□□□□ -0.55
LAMP1-203ENST00000472564 Q6ZRP5 223 aa11.58□□□□□ -0.56
LAMP1-203ENST00000472564 HTTP42858 3142 aa11.57□□□□□ -0.56
LAMP1-203ENST00000472564 CFAP54Q96N23 3096 aa11.56□□□□□ -0.56
LAMP1-203ENST00000472564 LIMD2Q9BT23 127 aa11.56□□□□□ -0.56
LAMP1-203ENST00000472564 NHLRC4P0CG21 123 aaPredicted RBP11.55□□□□□ -0.56
LAMP1-203ENST00000472564 SPINK1P00995 79 aa11.55□□□□□ -0.56
LAMP1-203ENST00000472564 MDFIQ99750 246 aa11.54□□□□□ -0.56
LAMP1-203ENST00000472564 LINC00588Q9Y4M8 146 aa11.54□□□□□ -0.56
LAMP1-203ENST00000472564 TP53AIP1Q9HCN2 124 aa11.53□□□□□ -0.56
LAMP1-203ENST00000472564 MOBPQ13875 183 aa11.53□□□□□ -0.56
LAMP1-203ENST00000472564 MAST4O15021 2626 aa11.53□□□□□ -0.56
LAMP1-203ENST00000472564 PHF5AQ7RTV0 110 aaKnown RBP11.53□□□□□ -0.56
LAMP1-203ENST00000472564 GIG44P09565 113 aaPredicted RBP11.53□□□□□ -0.56
LAMP1-203ENST00000472564 FLNAP21333 2647 aaKnown RBP11.52□□□□□ -0.57
LAMP1-203ENST00000472564 A0A096LNT2 108 aa11.51□□□□□ -0.57
LAMP1-203ENST00000472564 EPM2AB3EWF7 344 aa11.5□□□□□ -0.57
LAMP1-203ENST00000472564 KRTAP24-1Q3LI83 254 aa11.5□□□□□ -0.57
LAMP1-203ENST00000472564 C16orf90A8MZG2 172 aa11.5□□□□□ -0.57
LAMP1-203ENST00000472564 C19orf73Q9NVV2 129 aa11.49□□□□□ -0.57
LAMP1-203ENST00000472564 LINC00528Q8N1L1 170 aa11.48□□□□□ -0.57
LAMP1-203ENST00000472564 LAMA2P24043 3122 aaKnown RBP11.48□□□□□ -0.57
LAMP1-203ENST00000472564 TRBV7-4A0A0J9YYF1 115 aa11.48□□□□□ -0.57
LAMP1-203ENST00000472564 DNAH10OSP0CZ25 163 aa11.48□□□□□ -0.57
LAMP1-203ENST00000472564 ZNF575Q86XF7 245 aa11.47□□□□□ -0.57
LAMP1-203ENST00000472564 PRR34Q9NV39 138 aa11.47□□□□□ -0.57
LAMP1-203ENST00000472564 IGKV2D-30A0A075B6S6 120 aa11.47□□□□□ -0.57
LAMP1-203ENST00000472564 H3BPC8 53 aa11.47□□□□□ -0.57
LAMP1-203ENST00000472564 IGKV2-30P06310 120 aa11.47□□□□□ -0.57
LAMP1-203ENST00000472564 TRAV22A0A0B4J277 110 aa11.47□□□□□ -0.57
LAMP1-203ENST00000472564 SERTAD4-AS1Q5TG53 156 aa11.46□□□□□ -0.57
LAMP1-203ENST00000472564 RPL37AP61513 92 aaKnown RBP11.46□□□□□ -0.58
LAMP1-203ENST00000472564 FAM168BA1KXE4 195 aa11.46□□□□□ -0.58
LAMP1-203ENST00000472564 KCNQ1DNQ9H478 68 aa11.45□□□□□ -0.58
LAMP1-203ENST00000472564 CHTF8P0CG12 524 aa11.44□□□□□ -0.58
LAMP1-203ENST00000472564 ITPR3Q14573 2671 aa11.44□□□□□ -0.58
LAMP1-203ENST00000472564 LAMA3Q16787 3333 aa11.43□□□□□ -0.58
LAMP1-203ENST00000472564 K7EQZ3 153 aa11.42□□□□□ -0.58
LAMP1-203ENST00000472564 AKAP13Q12802 2813 aa11.41□□□□□ -0.58
LAMP1-203ENST00000472564 LINC00612Q8N6U2 182 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms