RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 C20orf78Q9BR46 151 aa5.45□□□□□ -1.54
CDHR3-209ENST00000472116 APOC3P02656 99 aa5.44□□□□□ -1.54
CDHR3-209ENST00000472116 RAB5BP61020 215 aa5.44□□□□□ -1.54
CDHR3-209ENST00000472116 RHEBQ15382 184 aa5.44□□□□□ -1.54
CDHR3-209ENST00000472116 KRTAP20-1Q3LI63 56 aa5.44□□□□□ -1.54
CDHR3-209ENST00000472116 ADCYAP1P18509 176 aa5.43□□□□□ -1.54
CDHR3-209ENST00000472116 RPL24P83731 157 aaKnown RBP5.43□□□□□ -1.54
CDHR3-209ENST00000472116 IGLV4-3A0A075B6K6 122 aa5.42□□□□□ -1.54
CDHR3-209ENST00000472116 HIGD1CA8MV81 97 aa5.42□□□□□ -1.54
CDHR3-209ENST00000472116 K7EN84 100 aa5.42□□□□□ -1.54
CDHR3-209ENST00000472116 IGLV6-57P01721 117 aa5.42□□□□□ -1.54
CDHR3-209ENST00000472116 MT-ND4LP03901 98 aa5.42□□□□□ -1.54
CDHR3-209ENST00000472116 RAB5AP20339 215 aa5.42□□□□□ -1.54
CDHR3-209ENST00000472116 ADIRFQ15847 76 aa5.42□□□□□ -1.54
CDHR3-209ENST00000472116 OCC1Q8TAD7 63 aa5.42□□□□□ -1.54
CDHR3-209ENST00000472116 TIMM17AQ99595 171 aa5.42□□□□□ -1.54
CDHR3-209ENST00000472116 SMIM2Q9BVW6 85 aa5.42□□□□□ -1.54
CDHR3-209ENST00000472116 PYGO1Q9Y3Y4 419 aa5.42□□□□□ -1.54
CDHR3-209ENST00000472116 NEBP20929 6669 aa5.41□□□□□ -1.54
CDHR3-209ENST00000472116 NPSP0C0P6 89 aa5.41□□□□□ -1.54
CDHR3-209ENST00000472116 CKS2P33552 79 aa5.41□□□□□ -1.54
CDHR3-209ENST00000472116 RPL23P62829 140 aaKnown RBP5.41□□□□□ -1.54
CDHR3-209ENST00000472116 SEC11AP67812 179 aa5.41□□□□□ -1.54
CDHR3-209ENST00000472116 RIGQ13278 110 aa5.41□□□□□ -1.54
CDHR3-209ENST00000472116 CT83Q5H943 113 aa5.41□□□□□ -1.54
CDHR3-209ENST00000472116 ANAPC16Q96DE5 110 aa5.41□□□□□ -1.54
CDHR3-209ENST00000472116 HERVK_113P63121 156 aa5.4□□□□□ -1.54
CDHR3-209ENST00000472116 GAGE2AQ6NT46 116 aa5.4□□□□□ -1.54
CDHR3-209ENST00000472116 FAM231DQ6ZW35 169 aa5.4□□□□□ -1.54
CDHR3-209ENST00000472116 LIMD2Q9BT23 127 aa5.4□□□□□ -1.54
CDHR3-209ENST00000472116 VCX2Q9H322 139 aa5.4□□□□□ -1.54
CDHR3-209ENST00000472116 OSTCQ9NRP0 149 aa5.4□□□□□ -1.54
CDHR3-209ENST00000472116 TRBV24-1A0A075B6N3 115 aa5.39□□□□□ -1.55
CDHR3-209ENST00000472116 LINC00483Q53H64 154 aa5.39□□□□□ -1.55
CDHR3-209ENST00000472116 SMCR5Q8TEV8 140 aa5.39□□□□□ -1.55
CDHR3-209ENST00000472116 VPREB1P12018 145 aa5.38□□□□□ -1.55
CDHR3-209ENST00000472116 RPL37P61927 97 aaKnown RBP5.38□□□□□ -1.55
CDHR3-209ENST00000472116 MRPL51Q4U2R6 128 aaKnown RBP5.38□□□□□ -1.55
CDHR3-209ENST00000472116 C9orf153Q5TBE3 101 aa5.38□□□□□ -1.55
CDHR3-209ENST00000472116 COX7B2Q8TF08 81 aa5.38□□□□□ -1.55
CDHR3-209ENST00000472116 RPS10P5Q9NQ39 176 aa5.38□□□□□ -1.55
CDHR3-209ENST00000472116 SMCO4Q9NRQ5 59 aa5.38□□□□□ -1.55
CDHR3-209ENST00000472116 CDKN2A-AS1Q9UH64 79 aa5.38□□□□□ -1.55
CDHR3-209ENST00000472116 TRAV9-1A0A075B6T8 112 aa5.37□□□□□ -1.55
CDHR3-209ENST00000472116 S100PP25815 95 aa5.37□□□□□ -1.55
CDHR3-209ENST00000472116 FAM104BQ5XKR9 115 aa5.37□□□□□ -1.55
CDHR3-209ENST00000472116 ATP5LO75964 103 aa5.36□□□□□ -1.55
CDHR3-209ENST00000472116 PFN2P35080 140 aa5.36□□□□□ -1.55
CDHR3-209ENST00000472116 KRTAP19-6Q3LI70 58 aa5.36□□□□□ -1.55
CDHR3-209ENST00000472116 PDZD11Q5EBL8 140 aa5.35□□□□□ -1.55
CDHR3-209ENST00000472116 ZC2HC1BQ5TFG8 222 aa5.35□□□□□ -1.55
CDHR3-209ENST00000472116 V9GYV3 84 aa5.35□□□□□ -1.55
CDHR3-209ENST00000472116 ETDCA0A1B0GVM5 59 aa5.34□□□□□ -1.55
CDHR3-209ENST00000472116 SMIM27A0A1W2PRY6 76 aa5.34□□□□□ -1.55
CDHR3-209ENST00000472116 C2orf66Q6UXQ4 117 aa5.34□□□□□ -1.55
CDHR3-209ENST00000472116 FAM19A3Q7Z5A8 133 aa5.34□□□□□ -1.55
CDHR3-209ENST00000472116 AMELXQ99217 191 aa5.34□□□□□ -1.55
CDHR3-209ENST00000472116 NAT8BQ9UHF3 227 aa5.34□□□□□ -1.55
CDHR3-209ENST00000472116 CYSLTR1Q9Y271 337 aa5.34□□□□□ -1.55
CDHR3-209ENST00000472116 A0A1B0GW15 77 aa5.33□□□□□ -1.56
CDHR3-209ENST00000472116 D6R8Y8 96 aa5.33□□□□□ -1.56
CDHR3-209ENST00000472116 MT2AP02795 61 aa5.33□□□□□ -1.56
CDHR3-209ENST00000472116 COX19Q49B96 90 aa5.33□□□□□ -1.56
CDHR3-209ENST00000472116 PAPPA-AS1Q5QFB9 102 aa5.33□□□□□ -1.56
CDHR3-209ENST00000472116 ATP5L2Q7Z4Y8 100 aa5.33□□□□□ -1.56
CDHR3-209ENST00000472116 SND1-IT1Q9HBX3 110 aa5.33□□□□□ -1.56
CDHR3-209ENST00000472116 C20orf202A1L168 122 aa5.32□□□□□ -1.56
CDHR3-209ENST00000472116 SMIM1B2RUZ4 78 aa5.32□□□□□ -1.56
CDHR3-209ENST00000472116 PRYO14603 147 aa5.32□□□□□ -1.56
CDHR3-209ENST00000472116 NPYP01303 97 aa5.32□□□□□ -1.56
CDHR3-209ENST00000472116 S100A8P05109 93 aa5.32□□□□□ -1.56
CDHR3-209ENST00000472116 KRTAP10-10P60014 251 aa5.32□□□□□ -1.56
CDHR3-209ENST00000472116 LOC389332A0A1B0GUA5 103 aa5.31□□□□□ -1.56
CDHR3-209ENST00000472116 S100A12P80511 92 aa5.31□□□□□ -1.56
CDHR3-209ENST00000472116 PPBPP02775 128 aa5.3□□□□□ -1.56
CDHR3-209ENST00000472116 YPEL4Q96NS1 127 aa5.3□□□□□ -1.56
CDHR3-209ENST00000472116 COLCA2A8K830 154 aa5.28□□□□□ -1.56
CDHR3-209ENST00000472116 MT1FP04733 61 aa5.28□□□□□ -1.56
CDHR3-209ENST00000472116 COX17Q14061 63 aa5.28□□□□□ -1.56
CDHR3-209ENST00000472116 HRCT1Q6UXD1 115 aa5.28□□□□□ -1.56
CDHR3-209ENST00000472116 ERG28Q9UKR5 140 aa5.28□□□□□ -1.56
CDHR3-209ENST00000472116 A0A1B0GXF2 115 aa5.27□□□□□ -1.57
CDHR3-209ENST00000472116 SPINK8P0C7L1 97 aa5.27□□□□□ -1.57
CDHR3-209ENST00000472116 MRPL54Q6P161 138 aaKnown RBP5.27□□□□□ -1.57
CDHR3-209ENST00000472116 ORMDL3Q8N138 153 aa5.27□□□□□ -1.57
CDHR3-209ENST00000472116 PRSS47A8MTI9 375 aa5.26□□□□□ -1.57
CDHR3-209ENST00000472116 LGALS3P17931 250 aaKnown RBP5.26□□□□□ -1.57
CDHR3-209ENST00000472116 ORMDL2Q53FV1 153 aa5.26□□□□□ -1.57
CDHR3-209ENST00000472116 PRELID3AQ96N28 172 aa5.26□□□□□ -1.57
CDHR3-209ENST00000472116 TRBV20-1A0A075B6N2 111 aa5.25□□□□□ -1.57
CDHR3-209ENST00000472116 IGIPA6NJ69 53 aa5.25□□□□□ -1.57
CDHR3-209ENST00000472116 H3BRM9 83 aa5.25□□□□□ -1.57
CDHR3-209ENST00000472116 SPRR1AP35321 89 aa5.25□□□□□ -1.57
CDHR3-209ENST00000472116 ATP11AUNQ6ZP68 121 aa5.25□□□□□ -1.57
CDHR3-209ENST00000472116 Q8NDZ9 215 aa5.25□□□□□ -1.57
CDHR3-209ENST00000472116 MAP1LC3AQ9H492 121 aa5.25□□□□□ -1.57
CDHR3-209ENST00000472116 TINCRA0A1B0GVN0 87 aa5.24□□□□□ -1.57
CDHR3-209ENST00000472116 G0S2P27469 103 aa5.24□□□□□ -1.57
CDHR3-209ENST00000472116 TMEM136Q6ZRR5 245 aa5.24□□□□□ -1.57
CDHR3-209ENST00000472116 KCNQ1DNQ9H478 68 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms