RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 HIGD2AQ9BW72 106 aa10.55□□□□□ -0.72
SORT1-203ENST00000471996 TOMM6Q96B49 74 aa10.54□□□□□ -0.72
SORT1-203ENST00000471996 NDUFA12Q9UI09 145 aa10.54□□□□□ -0.72
SORT1-203ENST00000471996 PDZD11Q5EBL8 140 aa10.53□□□□□ -0.72
SORT1-203ENST00000471996 LINC01546A6NGU7 62 aa10.52□□□□□ -0.73
SORT1-203ENST00000471996 VPREB1P12018 145 aa10.52□□□□□ -0.73
SORT1-203ENST00000471996 ERASQ7Z444 233 aa10.52□□□□□ -0.73
SORT1-203ENST00000471996 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.51□□□□□ -0.73
SORT1-203ENST00000471996 RPS10P5Q9NQ39 176 aa10.51□□□□□ -0.73
SORT1-203ENST00000471996 FABP9Q0Z7S8 132 aa10.49□□□□□ -0.73
SORT1-203ENST00000471996 SCGB3A1Q96QR1 104 aa10.49□□□□□ -0.73
SORT1-203ENST00000471996 MRPL18Q9H0U6 180 aaKnown RBP10.49□□□□□ -0.73
SORT1-203ENST00000471996 ZNF706Q9Y5V0 76 aaPredicted RBP10.49□□□□□ -0.73
SORT1-203ENST00000471996 FAM19A2Q8N3H0 131 aa10.48□□□□□ -0.73
SORT1-203ENST00000471996 Q8N377 158 aa10.47□□□□□ -0.73
SORT1-203ENST00000471996 RPL24P83731 157 aaKnown RBP10.46□□□□□ -0.73
SORT1-203ENST00000471996 NDUFA5Q16718 116 aa10.46□□□□□ -0.73
SORT1-203ENST00000471996 FA2HQ7L5A8 372 aa10.46□□□□□ -0.73
SORT1-203ENST00000471996 SMCO4Q9NRQ5 59 aa10.46□□□□□ -0.73
SORT1-203ENST00000471996 IGLV5-45A0A087WSX0 123 aa10.45□□□□□ -0.74
SORT1-203ENST00000471996 SNAPINO95295 136 aa10.45□□□□□ -0.74
SORT1-203ENST00000471996 PFN2P35080 140 aa10.45□□□□□ -0.74
SORT1-203ENST00000471996 RPS29P62273 56 aaKnown RBP10.45□□□□□ -0.74
SORT1-203ENST00000471996 SND1-IT1Q9HBX3 110 aa10.45□□□□□ -0.74
SORT1-203ENST00000471996 TINCRA0A1B0GVN0 87 aa10.44□□□□□ -0.74
SORT1-203ENST00000471996 ATP5LO75964 103 aa10.44□□□□□ -0.74
SORT1-203ENST00000471996 SVBPQ8N300 66 aa10.44□□□□□ -0.74
SORT1-203ENST00000471996 APOC3P02656 99 aa10.43□□□□□ -0.74
SORT1-203ENST00000471996 SPINK8P0C7L1 97 aa10.43□□□□□ -0.74
SORT1-203ENST00000471996 Q8NDZ9 215 aa10.43□□□□□ -0.74
SORT1-203ENST00000471996 TRAPPC1Q9Y5R8 145 aa10.43□□□□□ -0.74
SORT1-203ENST00000471996 PMVKQ15126 192 aa10.42□□□□□ -0.74
SORT1-203ENST00000471996 SLC25A20O43772 301 aa10.41□□□□□ -0.74
SORT1-203ENST00000471996 CST9LQ9H4G1 147 aa10.41□□□□□ -0.74
SORT1-203ENST00000471996 IGLV8-61A0A075B6I0 122 aa10.4□□□□□ -0.74
SORT1-203ENST00000471996 PCOTHQ58A44 107 aa10.4□□□□□ -0.74
SORT1-203ENST00000471996 M0R2T5 61 aa10.39□□□□□ -0.75
SORT1-203ENST00000471996 LINC00614P0C842 121 aa10.39□□□□□ -0.75
SORT1-203ENST00000471996 C18orf32Q8TCD1 76 aa10.38□□□□□ -0.75
SORT1-203ENST00000471996 LINC00483Q53H64 154 aa10.37□□□□□ -0.75
SORT1-203ENST00000471996 SMCR5Q8TEV8 140 aa10.37□□□□□ -0.75
SORT1-203ENST00000471996 ERG28Q9UKR5 140 aa10.37□□□□□ -0.75
SORT1-203ENST00000471996 FLGP20930 4061 aaPredicted RBP10.37□□□□□ -0.75
SORT1-203ENST00000471996 H3BRM9 83 aa10.36□□□□□ -0.75
SORT1-203ENST00000471996 HBDP02042 147 aa10.35□□□□□ -0.75
SORT1-203ENST00000471996 MOBPQ13875 183 aa10.35□□□□□ -0.75
SORT1-203ENST00000471996 COX17Q14061 63 aa10.35□□□□□ -0.75
SORT1-203ENST00000471996 SSBP3-AS1Q7Z2R9 100 aa10.35□□□□□ -0.75
SORT1-203ENST00000471996 URB1-AS1Q96HZ7 61 aa10.34□□□□□ -0.75
SORT1-203ENST00000471996 A0A096LNJ9 63 aa10.33□□□□□ -0.76
SORT1-203ENST00000471996 IGLC3P0DOY3 106 aa10.33□□□□□ -0.76
SORT1-203ENST00000471996 IGLV9-49A0A0B4J1Y8 123 aa10.32□□□□□ -0.76
SORT1-203ENST00000471996 IGLV5-39A0A0G2JS06 123 aa10.31□□□□□ -0.76
SORT1-203ENST00000471996 GAGE2AQ6NT46 116 aa10.31□□□□□ -0.76
SORT1-203ENST00000471996 NDUFA6P56556 154 aa10.3□□□□□ -0.76
SORT1-203ENST00000471996 YPEL4Q96NS1 127 aa10.3□□□□□ -0.76
SORT1-203ENST00000471996 PRYO14603 147 aa10.29□□□□□ -0.76
SORT1-203ENST00000471996 SPRR1AP35321 89 aa10.29□□□□□ -0.76
SORT1-203ENST00000471996 CHCHD1Q96BP2 118 aaKnown RBP10.29□□□□□ -0.76
SORT1-203ENST00000471996 ZNF625Q96I27 306 aaPredicted RBP10.29□□□□□ -0.76
SORT1-203ENST00000471996 KRTAP4-16G5E9R7 235 aaPredicted RBP10.27□□□□□ -0.77
SORT1-203ENST00000471996 ZNF22P17026 224 aaPredicted RBP10.27□□□□□ -0.77
SORT1-203ENST00000471996 PMCHL1Q16048 86 aa10.26□□□□□ -0.77
SORT1-203ENST00000471996 SFTA2Q6UW10 78 aa10.26□□□□□ -0.77
SORT1-203ENST00000471996 BAGE3Q86Y29 109 aa10.26□□□□□ -0.77
SORT1-203ENST00000471996 SSPOA2VEC9 5147 aa10.26□□□□□ -0.77
SORT1-203ENST00000471996 ETDCA0A1B0GVM5 59 aa10.25□□□□□ -0.77
SORT1-203ENST00000471996 KCNQ1DNQ9H478 68 aa10.25□□□□□ -0.77
SORT1-203ENST00000471996 USH2AO75445 5202 aa10.24□□□□□ -0.77
SORT1-203ENST00000471996 TRAV12-1A0A0B4J245 112 aa10.23□□□□□ -0.77
SORT1-203ENST00000471996 COX6B2Q6YFQ2 88 aa10.22□□□□□ -0.77
SORT1-203ENST00000471996 CHTOPQ9Y3Y2 248 aaKnown RBP10.22□□□□□ -0.77
SORT1-203ENST00000471996 C9orf92A6NGG3 77 aa10.21□□□□□ -0.77
SORT1-203ENST00000471996 C11orf86A6NJI1 115 aa10.21□□□□□ -0.77
SORT1-203ENST00000471996 ERC2-IT1O76042 136 aa10.21□□□□□ -0.77
SORT1-203ENST00000471996 LINC00158P58513 81 aa10.21□□□□□ -0.77
SORT1-203ENST00000471996 TMEM170BQ5T4T1 132 aa10.21□□□□□ -0.77
SORT1-203ENST00000471996 IFI27L1Q96BM0 104 aa10.21□□□□□ -0.77
SORT1-203ENST00000471996 HSBP1O75506 76 aa10.19□□□□□ -0.78
SORT1-203ENST00000471996 B5MCH6 92 aa10.17□□□□□ -0.78
SORT1-203ENST00000471996 A0A0U1RRA0 63 aa10.16□□□□□ -0.78
SORT1-203ENST00000471996 NCR3O14931 201 aa10.16□□□□□ -0.78
SORT1-203ENST00000471996 TRGC2P03986 189 aa10.16□□□□□ -0.78
SORT1-203ENST00000471996 C9orf153Q5TBE3 101 aa10.16□□□□□ -0.78
SORT1-203ENST00000471996 BOD1L2Q8IYS8 172 aa10.16□□□□□ -0.78
SORT1-203ENST00000471996 TRBV10-3A0A0K0K1G6 114 aa10.15□□□□□ -0.78
SORT1-203ENST00000471996 TMEM223A0PJW6 202 aa10.15□□□□□ -0.78
SORT1-203ENST00000471996 Q9BRP9 147 aa10.14□□□□□ -0.79
SORT1-203ENST00000471996 SLC7A5P1Q8MH63 180 aa10.13□□□□□ -0.79
SORT1-203ENST00000471996 FCGBPQ9Y6R7 5405 aaPredicted RBP10.12□□□□□ -0.79
SORT1-203ENST00000471996 LEPROTL1O95214 131 aa10.12□□□□□ -0.79
SORT1-203ENST00000471996 LINC00587B1AMM8 73 aa10.11□□□□□ -0.79
SORT1-203ENST00000471996 IGLV6-57P01721 117 aa10.11□□□□□ -0.79
SORT1-203ENST00000471996 S100A12P80511 92 aa10.11□□□□□ -0.79
SORT1-203ENST00000471996 LIMD2Q9BT23 127 aa10.11□□□□□ -0.79
SORT1-203ENST00000471996 COLCA2A8K830 154 aa10.09□□□□□ -0.79
SORT1-203ENST00000471996 ATP6V1G1O75348 118 aa10.09□□□□□ -0.79
SORT1-203ENST00000471996 SERF1AO75920 110 aa10.09□□□□□ -0.79
SORT1-203ENST00000471996 HERV-K104P63124 156 aa10.09□□□□□ -0.79
SORT1-203ENST00000471996 HSPB8Q9UJY1 196 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 287.8 ms