RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 PGPEP1Q9NXJ5 209 aa5.4□□□□□ -1.55
GTF3A-206ENST00000470606 SACSQ9NZJ4 4579 aa5.4□□□□□ -1.55
GTF3A-206ENST00000470606 DNAH17Q9UFH2 4485 aa5.39□□□□□ -1.55
GTF3A-206ENST00000470606 PSCAO43653 123 aa5.39□□□□□ -1.55
GTF3A-206ENST00000470606 KRTAP17-1Q9BYP8 105 aa5.39□□□□□ -1.55
GTF3A-206ENST00000470606 PRO1854Q9UHT4 67 aa5.39□□□□□ -1.55
GTF3A-206ENST00000470606 CARD19Q96LW7 228 aa5.38□□□□□ -1.55
GTF3A-206ENST00000470606 KMT2CQ8NEZ4 4911 aaKnown RBP5.38□□□□□ -1.55
GTF3A-206ENST00000470606 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.38□□□□□ -1.55
GTF3A-206ENST00000470606 NDUFC2-KCTD14E9PQ53 114 aa5.38□□□□□ -1.55
GTF3A-206ENST00000470606 H7C2G1 150 aa5.38□□□□□ -1.55
GTF3A-206ENST00000470606 FUSP35637 526 aaKnown RBP eCLIP5.38□□□□□ -1.55
GTF3A-206ENST00000470606 C9orf129Q5T035 196 aaKnown RBP5.38□□□□□ -1.55
GTF3A-206ENST00000470606 FAT2Q9NYQ8 4349 aa5.37□□□□□ -1.55
GTF3A-206ENST00000470606 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.37□□□□□ -1.55
GTF3A-206ENST00000470606 F8WDY8 70 aa5.37□□□□□ -1.55
GTF3A-206ENST00000470606 LCE2DQ5TA82 110 aaPredicted RBP5.37□□□□□ -1.55
GTF3A-206ENST00000470606 A0A1W2PPM0 123 aa5.36□□□□□ -1.55
GTF3A-206ENST00000470606 RPL13AP40429 203 aaKnown RBP5.36□□□□□ -1.55
GTF3A-206ENST00000470606 CNBPP62633 177 aaKnown RBP5.36□□□□□ -1.55
GTF3A-206ENST00000470606 LINC01620Q4KN68 170 aa5.36□□□□□ -1.55
GTF3A-206ENST00000470606 GAGE2EQ4V326 116 aa5.36□□□□□ -1.55
GTF3A-206ENST00000470606 KRTAP7-1Q8IUC3 87 aa5.36□□□□□ -1.55
GTF3A-206ENST00000470606 GAGE2DQ9UEU5 116 aa5.36□□□□□ -1.55
GTF3A-206ENST00000470606 A0A087WTM6 91 aa5.36□□□□□ -1.55
GTF3A-206ENST00000470606 TLX1NBP0CAT3 122 aa5.36□□□□□ -1.55
GTF3A-206ENST00000470606 RNF151Q2KHN1 245 aa5.36□□□□□ -1.55
GTF3A-206ENST00000470606 DNAH11Q96DT5 4516 aa5.36□□□□□ -1.55
GTF3A-206ENST00000470606 PKD1P98161 4303 aa5.35□□□□□ -1.55
GTF3A-206ENST00000470606 TRIAP1O43715 76 aa5.35□□□□□ -1.55
GTF3A-206ENST00000470606 COPS9Q8WXC6 57 aa5.35□□□□□ -1.55
GTF3A-206ENST00000470606 FAM168BA1KXE4 195 aa5.35□□□□□ -1.55
GTF3A-206ENST00000470606 NCR3O14931 201 aa5.35□□□□□ -1.55
GTF3A-206ENST00000470606 RTL8CO15255 209 aa5.35□□□□□ -1.55
GTF3A-206ENST00000470606 NDUFC2O95298 119 aa5.35□□□□□ -1.55
GTF3A-206ENST00000470606 VPREB1P12018 145 aa5.35□□□□□ -1.55
GTF3A-206ENST00000470606 Q8N814 137 aa5.35□□□□□ -1.55
GTF3A-206ENST00000470606 RPL18AQ02543 176 aaKnown RBP5.34□□□□□ -1.55
GTF3A-206ENST00000470606 VAMP3Q15836 100 aa5.34□□□□□ -1.55
GTF3A-206ENST00000470606 C1orf134Q5TEV5 83 aa5.34□□□□□ -1.55
GTF3A-206ENST00000470606 SERTAD4-AS1Q5TG53 156 aa5.34□□□□□ -1.55
GTF3A-206ENST00000470606 A0A096LNI7 61 aa5.33□□□□□ -1.56
GTF3A-206ENST00000470606 TNP2Q05952 138 aa5.33□□□□□ -1.56
GTF3A-206ENST00000470606 PKHD1P08F94 4074 aa5.33□□□□□ -1.56
GTF3A-206ENST00000470606 SMIM11BQ8TCY0 68 aa5.33□□□□□ -1.56
GTF3A-206ENST00000470606 RYR2Q92736 4967 aa5.32□□□□□ -1.56
GTF3A-206ENST00000470606 SRRM2Q9UQ35 2752 aaKnown RBP5.32□□□□□ -1.56
GTF3A-206ENST00000470606 TRAV13-2A0A0B4J235 113 aa5.32□□□□□ -1.56
GTF3A-206ENST00000470606 PANO1I0J062 215 aa5.32□□□□□ -1.56
GTF3A-206ENST00000470606 CHTF8P0CG12 524 aa5.32□□□□□ -1.56
GTF3A-206ENST00000470606 FABP2P12104 132 aa5.32□□□□□ -1.56
GTF3A-206ENST00000470606 GAGE2BQ13066 116 aa5.32□□□□□ -1.56
GTF3A-206ENST00000470606 SDIM1Q6ZPB5 146 aa5.32□□□□□ -1.56
GTF3A-206ENST00000470606 C9orf163Q8N9P6 203 aa5.32□□□□□ -1.56
GTF3A-206ENST00000470606 SPCS1Q9Y6A9 102 aa5.32□□□□□ -1.56
GTF3A-206ENST00000470606 LOC107984640A0A0U1RRK4 108 aa5.31□□□□□ -1.56
GTF3A-206ENST00000470606 K7EP34 96 aa5.31□□□□□ -1.56
GTF3A-206ENST00000470606 TCL1BO95988 128 aa5.31□□□□□ -1.56
GTF3A-206ENST00000470606 IGLV6-57P01721 117 aa5.31□□□□□ -1.56
GTF3A-206ENST00000470606 Q1RN00 199 aa5.31□□□□□ -1.56
GTF3A-206ENST00000470606 C14orf177Q52M58 125 aa5.31□□□□□ -1.56
GTF3A-206ENST00000470606 DNAH5Q8TE73 4624 aa5.31□□□□□ -1.56
GTF3A-206ENST00000470606 RPL28P46779 137 aaKnown RBP5.31□□□□□ -1.56
GTF3A-206ENST00000470606 UBE2V1Q13404 147 aa5.31□□□□□ -1.56
GTF3A-206ENST00000470606 OR13C6PQ8NH95 151 aa5.31□□□□□ -1.56
GTF3A-206ENST00000470606 IGKV2-24A0A0C4DH68 120 aa5.3□□□□□ -1.56
GTF3A-206ENST00000470606 TRBV10-3A0A0K0K1G6 114 aa5.3□□□□□ -1.56
GTF3A-206ENST00000470606 H3BMG7 143 aa5.3□□□□□ -1.56
GTF3A-206ENST00000470606 PSMB2P49721 201 aa5.3□□□□□ -1.56
GTF3A-206ENST00000470606 CLEC2BQ92478 149 aa5.3□□□□□ -1.56
GTF3A-206ENST00000470606 FAM218AQ96MZ4 157 aa5.3□□□□□ -1.56
GTF3A-206ENST00000470606 TRBV10-2A0A0K0K1G8 114 aa5.29□□□□□ -1.56
GTF3A-206ENST00000470606 LCE6AA0A183 80 aa5.29□□□□□ -1.56
GTF3A-206ENST00000470606 A0A1W2PNN7 141 aa5.29□□□□□ -1.56
GTF3A-206ENST00000470606 GAGE10A6NGK3 116 aa5.29□□□□□ -1.56
GTF3A-206ENST00000470606 C16orf90A8MZG2 172 aa5.29□□□□□ -1.56
GTF3A-206ENST00000470606 MTURNQ8N3F0 131 aa5.29□□□□□ -1.56
GTF3A-206ENST00000470606 KRTAP10-2P60368 255 aa5.29□□□□□ -1.56
GTF3A-206ENST00000470606 C7orf33Q8WU49 177 aa5.29□□□□□ -1.56
GTF3A-206ENST00000470606 TMEM126AQ9H061 195 aa5.29□□□□□ -1.56
GTF3A-206ENST00000470606 SCGB1C2P0DMR2 95 aa5.28□□□□□ -1.56
GTF3A-206ENST00000470606 C21orf62-AS1Q17RA5 79 aa5.28□□□□□ -1.56
GTF3A-206ENST00000470606 FAM19A5Q7Z5A7 132 aaPredicted RBP5.28□□□□□ -1.56
GTF3A-206ENST00000470606 PRO0461Q9UI25 63 aa5.28□□□□□ -1.56
GTF3A-206ENST00000470606 PLA2G2DQ9UNK4 145 aa5.28□□□□□ -1.56
GTF3A-206ENST00000470606 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.28□□□□□ -1.56
GTF3A-206ENST00000470606 IGLV5-37A0A075B6J1 123 aa5.27□□□□□ -1.57
GTF3A-206ENST00000470606 M0R378 163 aa5.27□□□□□ -1.57
GTF3A-206ENST00000470606 SMCPP49901 116 aaPredicted RBP5.27□□□□□ -1.57
GTF3A-206ENST00000470606 C6orf99Q4VX62 202 aa5.27□□□□□ -1.57
GTF3A-206ENST00000470606 S100A7L2Q5SY68 101 aa5.27□□□□□ -1.57
GTF3A-206ENST00000470606 KRTAP11-1Q8IUC1 163 aa5.27□□□□□ -1.57
GTF3A-206ENST00000470606 C22orf24Q9Y442 160 aa5.27□□□□□ -1.57
GTF3A-206ENST00000470606 A0A087WYN8 130 aa5.26□□□□□ -1.57
GTF3A-206ENST00000470606 RPL37AP8A6NKH3 93 aa5.26□□□□□ -1.57
GTF3A-206ENST00000470606 LINC00167Q96N53 147 aa5.26□□□□□ -1.57
GTF3A-206ENST00000470606 KRTAP3-3Q9BYR6 98 aa5.26□□□□□ -1.57
GTF3A-206ENST00000470606 KRTAP3-2Q9BYR7 98 aa5.26□□□□□ -1.57
GTF3A-206ENST00000470606 LST1O00453 97 aa5.25□□□□□ -1.57
GTF3A-206ENST00000470606 GTF2H5Q6ZYL4 71 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms